Click here to switch to the map view.

The map label for this gene is 220918602

Identifier: 220918602

GI number: 220918602

Start: 3924745

End: 3925449

Strand: Reverse

Name: 220918602

Synonym: A2cp1_3510

Alternate gene names: NA

Gene position: 3925449-3924745 (Counterclockwise)

Preceding gene: 220918603

Following gene: 220918601

Centisome position: 78.05

GC content: 68.65

Gene sequence:

>705_bases
ATGGAAGACACCTTGAAGCAGGCCCTCGCGCTCGGACGCGGCTACTACCTCAAGAAGGACTACGGGCTCGCCGAGCAGTA
CCTGACCGAGGTCGTCGAGCAGAACCAGTCGTTCGCCGACGTGTACAACATGCTCGGCGTCATCTACCACGACCAGGGGC
AGTACCAGAAAGCGCTGCGCGCCTTCGAGGCGGCGCTCCGGATCAACCCCGGCTACACCGACGCGGCGCTGAACCTCGCC
GTCACGTACAACGACACCGGCAAGTACCGCGAGGCGCAGGAGACGTACCGCCACGCGCTGTCGCGCTCGGGCGCGCAGCA
CGGCAAGCTCGATCGCTTCGTGCAGGGCAAGCTCGCGAACATGTACGCCGACATCGGCGACGTGTACCTCTCCTCCGGCC
TGTACGCCGAGGCGATCGCCGAGTACCGGCGGGCGCTCGCGCTGGGGCCGGCGTTCGTGGACATCCGCGCGAAGCTGGCC
GGCGCGCTGCGCGACGCCGGGGAGCGCGAGGCGGCCATCGCCGAGTACGAGGAGGCGGTCCGGCAGGCCCCGAGCTACGT
GCTCGCGCGCCTCAACCTGGGCCTCTCGCTATTCACGGTGGGTCGCAAGGACGAGGCGGTGGGGCACTGGCAGCGGGTGC
TGGAGATCTCTCCCGGCAACCGCAACGCCGAGATGTACCTCCAGCTCGCGGCCGGGCAATCGTAA

Upstream 100 bases:

>100_bases
GACGGGCTGTGAGCGTCCCGCGCGGCGCGCGCGGCCGGTGAACGGCCGCTCGGGGCGCGCCGCGGTCTGGTGTAGACTCG
CGCGCCGGGAGGCCCCGACC

Downstream 100 bases:

>100_bases
CGGGGCTGCGCCCCGCCCCACGGAGCGGAGCTCCGCGCGGCCCCACCTTGCTGCGCGGGTCCCGTGACCTCGCGCGCCCG
CTGACGCGGGTGCGCGCGAG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_1 Repeat-Containing Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat Domain-Containing Protein; Peptidase; Two Domain Fusion Protein

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MEDTLKQALALGRGYYLKKDYGLAEQYLTEVVEQNQSFADVYNMLGVIYHDQGQYQKALRAFEAALRINPGYTDAALNLA
VTYNDTGKYREAQETYRHALSRSGAQHGKLDRFVQGKLANMYADIGDVYLSSGLYAEAIAEYRRALALGPAFVDIRAKLA
GALRDAGEREAAIAEYEEAVRQAPSYVLARLNLGLSLFTVGRKDEAVGHWQRVLEISPGNRNAEMYLQLAAGQS

Sequences:

>Translated_234_residues
MEDTLKQALALGRGYYLKKDYGLAEQYLTEVVEQNQSFADVYNMLGVIYHDQGQYQKALRAFEAALRINPGYTDAALNLA
VTYNDTGKYREAQETYRHALSRSGAQHGKLDRFVQGKLANMYADIGDVYLSSGLYAEAIAEYRRALALGPAFVDIRAKLA
GALRDAGEREAAIAEYEEAVRQAPSYVLARLNLGLSLFTVGRKDEAVGHWQRVLEISPGNRNAEMYLQLAAGQS
>Mature_234_residues
MEDTLKQALALGRGYYLKKDYGLAEQYLTEVVEQNQSFADVYNMLGVIYHDQGQYQKALRAFEAALRINPGYTDAALNLA
VTYNDTGKYREAQETYRHALSRSGAQHGKLDRFVQGKLANMYADIGDVYLSSGLYAEAIAEYRRALALGPAFVDIRAKLA
GALRDAGEREAAIAEYEEAVRQAPSYVLARLNLGLSLFTVGRKDEAVGHWQRVLEISPGNRNAEMYLQLAAGQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=227, Percent_Identity=26.8722466960352, Blast_Score=77, Evalue=9e-15,
Organism=Homo sapiens, GI32307148, Length=227, Percent_Identity=26.8722466960352, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI115532690, Length=181, Percent_Identity=28.7292817679558, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI115532692, Length=181, Percent_Identity=28.7292817679558, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI17647755, Length=195, Percent_Identity=29.2307692307692, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24585827, Length=195, Percent_Identity=29.2307692307692, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24585829, Length=195, Percent_Identity=29.2307692307692, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI19920486, Length=204, Percent_Identity=27.9411764705882, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI161076610, Length=204, Percent_Identity=27.9411764705882, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25986; Mature: 25986

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDTLKQALALGRGYYLKKDYGLAEQYLTEVVEQNQSFADVYNMLGVIYHDQGQYQKALR
CCHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHH
AFEAALRINPGYTDAALNLAVTYNDTGKYREAQETYRHALSRSGAQHGKLDRFVQGKLAN
HHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
MYADIGDVYLSSGLYAEAIAEYRRALALGPAFVDIRAKLAGALRDAGEREAAIAEYEEAV
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RQAPSYVLARLNLGLSLFTVGRKDEAVGHWQRVLEISPGNRNAEMYLQLAAGQS
HHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHEECCCCCCCEEEEEEECCCC
>Mature Secondary Structure
MEDTLKQALALGRGYYLKKDYGLAEQYLTEVVEQNQSFADVYNMLGVIYHDQGQYQKALR
CCHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHH
AFEAALRINPGYTDAALNLAVTYNDTGKYREAQETYRHALSRSGAQHGKLDRFVQGKLAN
HHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
MYADIGDVYLSSGLYAEAIAEYRRALALGPAFVDIRAKLAGALRDAGEREAAIAEYEEAV
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RQAPSYVLARLNLGLSLFTVGRKDEAVGHWQRVLEISPGNRNAEMYLQLAAGQS
HHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHEECCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA