| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918577
Identifier: 220918577
GI number: 220918577
Start: 3893609
End: 3895015
Strand: Direct
Name: 220918577
Synonym: A2cp1_3485
Alternate gene names: NA
Gene position: 3893609-3895015 (Clockwise)
Preceding gene: 220918576
Following gene: 220918578
Centisome position: 77.42
GC content: 83.58
Gene sequence:
>1407_bases TTGACGCCGCGGGCGGCCATCCCCGTGCTCCCGCCCGCGCTGCTCGCCGCCCTCGCGCTCGCCGCCCTCCCCGCCCGCGC GCAGGCGCCCGGCGCCGCGCCGCCGGCGCTCGCCGCCGCCGCCGAGGCGCTCGCGGACGCGCTCGGGCCGCCACCGGACG GCCGCCGCGCCCTGGCGCTCTCGGTGGAGACGCGCGCGCGGGCGCTGGCGGCGCCGCTCGAGGCCGCGCTGGAGGCGGCG CTCGCCCGCCGCGGCTACGCGGTGACCCCGGCGCGCGCCCCGGCCAGCGAGGCCGAGGCGGCGGCGCGCGCCTCCGGCCA GGACTGGCTGCTGCGGGTGCAGGCCGGGCTGGTGCCGGGGCGGCGCGAGCTGTCGCTGGTGGGCGAGGTGATCCCGGCGT GGGCGTCCTTCTTCCTGCAGCACCGCCCGGGCGCGCGCGCCATCCCGCCGCGCCTCGTGCAGGCCCGCGCGGCCGCCGAC CCGGACACGCTGCTGCTCGCCCGCGAGGACCGGCCGGCCGGCGCCGGCTTCGCGAGCGTGCGCGCGCTCGGGCAGGTGCC GGACGAGGTCCTGGCGCTCGCGGTGGGCGAGCCGGGCGGCGGCGGCGTCCGCGCGATCGTCGCCGTCACCTCGACCGAGG CCTGGGTGCTCTCCTCGGGCGGTGCGCCGGTGGCGCGGCGCGCGCTCGAGCCGGGGGAGCGGACGCCGGTGCGCGCCCCG GCCGCCGCGCTGGCGGTGGGCGAGTTCGGCGGCGGGCGGATCGCGGTGCGCCTGGCGGGCGCCGCACGCGGTGAGGTGCT CGCGCTACGCGACGGCGCCCTCCAGCCCGCGGGCGCGCTCGACGGCACGCCGGTCTGCGCCGCCGAGGGCGTGCGCGTGT GGGGCGCGTTCGCGCCCGGGCGCGGCGAGCTGCTCGACCGCCTCGCCGCGGATCCCGCGAGCCTGACGGCCGCCCCGCCT GCCGCCGGGGGCGCCGCGCCGGCCGCGCCGCGGCGCCTCTACCGCGTGACGGCGGCGCCGCACGGCGGGCCCGTGGCCGT CGCAGCGCTGGGCGTGGACGGGCGGCTCGACCTGCTCGGTCCCGACCTCGCGCCCGCCGCCGCGCCGCTCCGGGGCGTGG GCGCCGGCCTCGCGCTCGCGGACCTCGACGGCGACGGCGCGCCGGAGCTGGTGGTGTCCGAGCCCGGCCCGGGCGCCCCG GATCGCGTCCGGGTGCTGCGCACCTCCGGCGGTCCGCCGCTGCTCGAGTCCGGACCGGTCGCGGGGCGCATCCTGGCGGG CGCCGGCGGGGATCTCACCGGCGACGGCGTGGACGACGCGGTCCTCGGCTCGGTCGGCGCCGGCCCGGACGGCCGGCCCG TCACGACGCTCCTGCTGGTGAGCGCGGACGCGCGGGAGGCCCCGTGA
Upstream 100 bases:
>100_bases GCGGCGCGCCCGCGCTGCCGTTCCTGTCCGGCACCGCGCCGGCGCAGGAGGCCTCGTCGCACCCGGGCTCCGCGCCGCAG AACTTCTTCATGGACGACCA
Downstream 100 bases:
>100_bases TCCGACGCGCCGCCGCGCCCGGCCTCGCGCTCGTCCTCGCGCTCGGCGCCGGCCTCCCCGGCCCGGCGGCGGCCGCGATC CCGCCCGCGTCGGGCGGCGA
Product: FG-GAP repeat-containing protein
Products: NA
Alternate protein names: FG-GAP Repeat Protein
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MTPRAAIPVLPPALLAALALAALPARAQAPGAAPPALAAAAEALADALGPPPDGRRALALSVETRARALAAPLEAALEAA LARRGYAVTPARAPASEAEAAARASGQDWLLRVQAGLVPGRRELSLVGEVIPAWASFFLQHRPGARAIPPRLVQARAAAD PDTLLLAREDRPAGAGFASVRALGQVPDEVLALAVGEPGGGGVRAIVAVTSTEAWVLSSGGAPVARRALEPGERTPVRAP AAALAVGEFGGGRIAVRLAGAARGEVLALRDGALQPAGALDGTPVCAAEGVRVWGAFAPGRGELLDRLAADPASLTAAPP AAGGAAPAAPRRLYRVTAAPHGGPVAVAALGVDGRLDLLGPDLAPAAAPLRGVGAGLALADLDGDGAPELVVSEPGPGAP DRVRVLRTSGGPPLLESGPVAGRILAGAGGDLTGDGVDDAVLGSVGAGPDGRPVTTLLLVSADAREAP
Sequences:
>Translated_468_residues MTPRAAIPVLPPALLAALALAALPARAQAPGAAPPALAAAAEALADALGPPPDGRRALALSVETRARALAAPLEAALEAA LARRGYAVTPARAPASEAEAAARASGQDWLLRVQAGLVPGRRELSLVGEVIPAWASFFLQHRPGARAIPPRLVQARAAAD PDTLLLAREDRPAGAGFASVRALGQVPDEVLALAVGEPGGGGVRAIVAVTSTEAWVLSSGGAPVARRALEPGERTPVRAP AAALAVGEFGGGRIAVRLAGAARGEVLALRDGALQPAGALDGTPVCAAEGVRVWGAFAPGRGELLDRLAADPASLTAAPP AAGGAAPAAPRRLYRVTAAPHGGPVAVAALGVDGRLDLLGPDLAPAAAPLRGVGAGLALADLDGDGAPELVVSEPGPGAP DRVRVLRTSGGPPLLESGPVAGRILAGAGGDLTGDGVDDAVLGSVGAGPDGRPVTTLLLVSADAREAP >Mature_467_residues TPRAAIPVLPPALLAALALAALPARAQAPGAAPPALAAAAEALADALGPPPDGRRALALSVETRARALAAPLEAALEAAL ARRGYAVTPARAPASEAEAAARASGQDWLLRVQAGLVPGRRELSLVGEVIPAWASFFLQHRPGARAIPPRLVQARAAADP DTLLLAREDRPAGAGFASVRALGQVPDEVLALAVGEPGGGGVRAIVAVTSTEAWVLSSGGAPVARRALEPGERTPVRAPA AALAVGEFGGGRIAVRLAGAARGEVLALRDGALQPAGALDGTPVCAAEGVRVWGAFAPGRGELLDRLAADPASLTAAPPA AGGAAPAAPRRLYRVTAAPHGGPVAVAALGVDGRLDLLGPDLAPAAAPLRGVGAGLALADLDGDGAPELVVSEPGPGAPD RVRVLRTSGGPPLLESGPVAGRILAGAGGDLTGDGVDDAVLGSVGAGPDGRPVTTLLLVSADAREAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45917; Mature: 45786
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPRAAIPVLPPALLAALALAALPARAQAPGAAPPALAAAAEALADALGPPPDGRRALAL CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEE SVETRARALAAPLEAALEAALARRGYAVTPARAPASEAEAAARASGQDWLLRVQAGLVPG EEHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCC RRELSLVGEVIPAWASFFLQHRPGARAIPPRLVQARAAADPDTLLLAREDRPAGAGFASV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCHHHH RALGQVPDEVLALAVGEPGGGGVRAIVAVTSTEAWVLSSGGAPVARRALEPGERTPVRAP HHHHCCCCHHEEEEECCCCCCCEEEEEEEECCCEEEEECCCCHHHHHHCCCCCCCCCCCC AAALAVGEFGGGRIAVRLAGAARGEVLALRDGALQPAGALDGTPVCAAEGVRVWGAFAPG HHHEEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCC RGELLDRLAADPASLTAAPPAAGGAAPAAPRRLYRVTAAPHGGPVAVAALGVDGRLDLLG HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCEEEECC PDLAPAAAPLRGVGAGLALADLDGDGAPELVVSEPGPGAPDRVRVLRTSGGPPLLESGPV CCCCCHHCCHHHCCCCEEEEECCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCC AGRILAGAGGDLTGDGVDDAVLGSVGAGPDGRPVTTLLLVSADAREAP CEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCCCCC >Mature Secondary Structure TPRAAIPVLPPALLAALALAALPARAQAPGAAPPALAAAAEALADALGPPPDGRRALAL CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEE SVETRARALAAPLEAALEAALARRGYAVTPARAPASEAEAAARASGQDWLLRVQAGLVPG EEHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCC RRELSLVGEVIPAWASFFLQHRPGARAIPPRLVQARAAADPDTLLLAREDRPAGAGFASV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCHHHH RALGQVPDEVLALAVGEPGGGGVRAIVAVTSTEAWVLSSGGAPVARRALEPGERTPVRAP HHHHCCCCHHEEEEECCCCCCCEEEEEEEECCCEEEEECCCCHHHHHHCCCCCCCCCCCC AAALAVGEFGGGRIAVRLAGAARGEVLALRDGALQPAGALDGTPVCAAEGVRVWGAFAPG HHHEEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCC RGELLDRLAADPASLTAAPPAAGGAAPAAPRRLYRVTAAPHGGPVAVAALGVDGRLDLLG HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCEEEECC PDLAPAAAPLRGVGAGLALADLDGDGAPELVVSEPGPGAPDRVRVLRTSGGPPLLESGPV CCCCCHHCCHHHCCCCEEEEECCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCC AGRILAGAGGDLTGDGVDDAVLGSVGAGPDGRPVTTLLLVSADAREAP CEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA