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The map label for this gene is 220918536

Identifier: 220918536

GI number: 220918536

Start: 3833178

End: 3834776

Strand: Reverse

Name: 220918536

Synonym: A2cp1_3444

Alternate gene names: NA

Gene position: 3834776-3833178 (Counterclockwise)

Preceding gene: 220918537

Following gene: 220918533

Centisome position: 76.25

GC content: 77.61

Gene sequence:

>1599_bases
ATGGAGCCGTTCGACCTGGTGGTGGTGGGCGGCGGGCACAACGGCCTCGTGGCGGCCGCGTACGCGGCGCGCGCGGGCCA
GCGGACGCTGGTGCTGGAGGCGCTCGACCGCGTCGGCGGCGCGAGCGGCGGCGACGAGCCGTGGCCGGGCTTCCGCGTCT
CCACGGCCGCGTACGTCGTCAGCCTGTTCCGCCCCGAGATCGTCCGCGAGCTCGACCTCGCCCGCCACGGCTACGCGGTG
CTGCCGCGCGACCCGTCCTCGTTCACGCCGCTCCCCGACGGCCGCTCGCTCCTGCTCGGCCCGGACCCGGCGCTGAACCA
GCGCGAGATCGCGAAGTTCTCCCGGCGCGACGCGGAGCGCTTCCCGCGCTACGAGGCGCTGCTCGACCGGCTCGCCCGCG
CCGTCGAGCCGTCGCTGCTCGAGCCGCCGCCGGATCCGTTCTCCGGCCGGCCCGGCGACCTGTGGCGGCTGGCGCGCACC
GGCTGGCGGCTGCTGCGCCTCGGCAAGGACGGCCCGCGCGCGCTGGAGGTGCTGCTCGGGGCCGCGCGCCCCATCCTCGA
GCGCTGGTTCGAGTCGGAGCCGCTCCGCGCCACGCTCGCCACCGACGCCATCATCGGCGCGATGGCCTCGCCGTCCACGC
CCGGCACGGCGTACGTGCTGTTCCACCACGTGATGGGCGAGGTGAACGGCGCGCGCGGCGTCTGGGGCTACGTGCGCGGC
GGCATGGGCGCGCTCGCGGCCGCGCTGGCGGGCGCGGCACGGGCGGCCGGGGCGGAGGTCCGCACCGGCGCCCGGGTGGC
GCGGGTGCGGGTGCGCGGCGGGCGGGCGGACGGGGTGGTGCTGGCGGACGGCACCGAGATCGCGGCCCGGCGGGTGGCCT
CGTCGGTGGACGCGCGGCGCACGCTGCTCGGGATGGTGGGGGCGGAGCACCTCGCGCCGGAGGTGGCCGAGGCGGTGGGC
GCGATCGACTACGCGAGCGCCTCCCTCAAGATCAACCTGGCGCTCTCCGAGTTGCCGCGCTTCCCGGCGGCGCCGCACGC
CGGCGCAACGCCCGGCCCGCATCACCGCGGCACCATCCACATCTCGCCGACGCTGGACCACCTCGAGCGCGCGTTCGCCG
ACGCCGTGGCCGGCCGGCCCTCCCAGGAGCCGGTGCTGGAGTGCACCATCCCCTCCGCAGTGGACCCGGGCGTCGCGCCG
GCGGGCCGCCACCTGATGTCGATGTTCGTGCAGTACGCGCCGTACCGGCTGGCCGAGGGCTCCTGGGACGCGCTCAAGGA
GCCGTTCGCGGATCGCTGCGTGGCGCTGCTCGACCGCTACGCGCCCGGCTTCGCCGCCTCGGTGCTGCACCGCGAGGTGC
TCTCCCCGCTCGACCTGGAGCGGCGCTTCGGGCTCACCGGCGGGAACATCTTCCAGGGCGCGATGACGCCGGCGCAGCTG
CTCTTCCTGCGGCCGTTCCCCGGCGGCGGCGGCTACCGCACGCCGGTGCCGGGCCTGTACCTGTGCGGCGCCGCCACCCA
CCCGGGCGGCGGGGTCATGGGCGCGTGCGGCCGGAACGCGGCGCGCGAGATCCTGCGGGACGCGCGGCGGGGGCGGTGA

Upstream 100 bases:

>100_bases
GGAGCCCAGCCGTGGCGCCCGGGCGCCCGCCCCCCGCATCGCCGGGGGCGCGGCGCCCGGTGCGCTTGCGGCCGGCGGCC
CGCCCGCCTACCACCGCGGG

Downstream 100 bases:

>100_bases
CGCGCGCCGGCGGCCGCCGCGGCGCCGCGCCCCCGAGCACCGTCCGGGCCTCCGCGGCCAGACCGGCGGCCTTCGGCTCG
CCCTTGCGCGCGGCCGCGAG

Product: amine oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MEPFDLVVVGGGHNGLVAAAYAARAGQRTLVLEALDRVGGASGGDEPWPGFRVSTAAYVVSLFRPEIVRELDLARHGYAV
LPRDPSSFTPLPDGRSLLLGPDPALNQREIAKFSRRDAERFPRYEALLDRLARAVEPSLLEPPPDPFSGRPGDLWRLART
GWRLLRLGKDGPRALEVLLGAARPILERWFESEPLRATLATDAIIGAMASPSTPGTAYVLFHHVMGEVNGARGVWGYVRG
GMGALAAALAGAARAAGAEVRTGARVARVRVRGGRADGVVLADGTEIAARRVASSVDARRTLLGMVGAEHLAPEVAEAVG
AIDYASASLKINLALSELPRFPAAPHAGATPGPHHRGTIHISPTLDHLERAFADAVAGRPSQEPVLECTIPSAVDPGVAP
AGRHLMSMFVQYAPYRLAEGSWDALKEPFADRCVALLDRYAPGFAASVLHREVLSPLDLERRFGLTGGNIFQGAMTPAQL
LFLRPFPGGGGYRTPVPGLYLCGAATHPGGGVMGACGRNAAREILRDARRGR

Sequences:

>Translated_532_residues
MEPFDLVVVGGGHNGLVAAAYAARAGQRTLVLEALDRVGGASGGDEPWPGFRVSTAAYVVSLFRPEIVRELDLARHGYAV
LPRDPSSFTPLPDGRSLLLGPDPALNQREIAKFSRRDAERFPRYEALLDRLARAVEPSLLEPPPDPFSGRPGDLWRLART
GWRLLRLGKDGPRALEVLLGAARPILERWFESEPLRATLATDAIIGAMASPSTPGTAYVLFHHVMGEVNGARGVWGYVRG
GMGALAAALAGAARAAGAEVRTGARVARVRVRGGRADGVVLADGTEIAARRVASSVDARRTLLGMVGAEHLAPEVAEAVG
AIDYASASLKINLALSELPRFPAAPHAGATPGPHHRGTIHISPTLDHLERAFADAVAGRPSQEPVLECTIPSAVDPGVAP
AGRHLMSMFVQYAPYRLAEGSWDALKEPFADRCVALLDRYAPGFAASVLHREVLSPLDLERRFGLTGGNIFQGAMTPAQL
LFLRPFPGGGGYRTPVPGLYLCGAATHPGGGVMGACGRNAAREILRDARRGR
>Mature_532_residues
MEPFDLVVVGGGHNGLVAAAYAARAGQRTLVLEALDRVGGASGGDEPWPGFRVSTAAYVVSLFRPEIVRELDLARHGYAV
LPRDPSSFTPLPDGRSLLLGPDPALNQREIAKFSRRDAERFPRYEALLDRLARAVEPSLLEPPPDPFSGRPGDLWRLART
GWRLLRLGKDGPRALEVLLGAARPILERWFESEPLRATLATDAIIGAMASPSTPGTAYVLFHHVMGEVNGARGVWGYVRG
GMGALAAALAGAARAAGAEVRTGARVARVRVRGGRADGVVLADGTEIAARRVASSVDARRTLLGMVGAEHLAPEVAEAVG
AIDYASASLKINLALSELPRFPAAPHAGATPGPHHRGTIHISPTLDHLERAFADAVAGRPSQEPVLECTIPSAVDPGVAP
AGRHLMSMFVQYAPYRLAEGSWDALKEPFADRCVALLDRYAPGFAASVLHREVLSPLDLERRFGLTGGNIFQGAMTPAQL
LFLRPFPGGGGYRTPVPGLYLCGAATHPGGGVMGACGRNAAREILRDARRGR

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI229577391, Length=546, Percent_Identity=48.5347985347985, Blast_Score=475, Evalue=1e-134,
Organism=Caenorhabditis elegans, GI17540238, Length=533, Percent_Identity=42.2138836772983, Blast_Score=419, Evalue=1e-117,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56386; Mature: 56386

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPFDLVVVGGGHNGLVAAAYAARAGQRTLVLEALDRVGGASGGDEPWPGFRVSTAAYVV
CCCEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
SLFRPEIVRELDLARHGYAVLPRDPSSFTPLPDGRSLLLGPDPALNQREIAKFSRRDAER
HHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH
FPRYEALLDRLARAVEPSLLEPPPDPFSGRPGDLWRLARTGWRLLRLGKDGPRALEVLLG
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCHHEEEECCCCHHHHHHHHH
AARPILERWFESEPLRATLATDAIIGAMASPSTPGTAYVLFHHVMGEVNGARGVWGYVRG
HHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHC
GMGALAAALAGAARAAGAEVRTGARVARVRVRGGRADGVVLADGTEIAARRVASSVDARR
CHHHHHHHHHHHHHHCCCHHHCCCEEEEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHH
TLLGMVGAEHLAPEVAEAVGAIDYASASLKINLALSELPRFPAAPHAGATPGPHHRGTIH
HHHHHHHHHHHHHHHHHHHCCHHCCCCEEEEEEEHHHCCCCCCCCCCCCCCCCCCCCEEE
ISPTLDHLERAFADAVAGRPSQEPVLECTIPSAVDPGVAPAGRHLMSMFVQYAPYRLAEG
ECCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
SWDALKEPFADRCVALLDRYAPGFAASVLHREVLSPLDLERRFGLTGGNIFQGAMTPAQL
CHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCEECCCCCHHHE
LFLRPFPGGGGYRTPVPGLYLCGAATHPGGGVMGACGRNAAREILRDARRGR
EEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MEPFDLVVVGGGHNGLVAAAYAARAGQRTLVLEALDRVGGASGGDEPWPGFRVSTAAYVV
CCCEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
SLFRPEIVRELDLARHGYAVLPRDPSSFTPLPDGRSLLLGPDPALNQREIAKFSRRDAER
HHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH
FPRYEALLDRLARAVEPSLLEPPPDPFSGRPGDLWRLARTGWRLLRLGKDGPRALEVLLG
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCHHEEEECCCCHHHHHHHHH
AARPILERWFESEPLRATLATDAIIGAMASPSTPGTAYVLFHHVMGEVNGARGVWGYVRG
HHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHC
GMGALAAALAGAARAAGAEVRTGARVARVRVRGGRADGVVLADGTEIAARRVASSVDARR
CHHHHHHHHHHHHHHCCCHHHCCCEEEEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHH
TLLGMVGAEHLAPEVAEAVGAIDYASASLKINLALSELPRFPAAPHAGATPGPHHRGTIH
HHHHHHHHHHHHHHHHHHHCCHHCCCCEEEEEEEHHHCCCCCCCCCCCCCCCCCCCCEEE
ISPTLDHLERAFADAVAGRPSQEPVLECTIPSAVDPGVAPAGRHLMSMFVQYAPYRLAEG
ECCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
SWDALKEPFADRCVALLDRYAPGFAASVLHREVLSPLDLERRFGLTGGNIFQGAMTPAQL
CHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCEECCCCCHHHE
LFLRPFPGGGGYRTPVPGLYLCGAATHPGGGVMGACGRNAAREILRDARRGR
EEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]