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The map label for this gene is ytfH [H]

Identifier: 220918385

GI number: 220918385

Start: 3659124

End: 3659558

Strand: Reverse

Name: ytfH [H]

Synonym: A2cp1_3289

Alternate gene names: 220918385

Gene position: 3659558-3659124 (Counterclockwise)

Preceding gene: 220918387

Following gene: 220918384

Centisome position: 72.76

GC content: 74.71

Gene sequence:

>435_bases
ATGGCGAGGACGGGCAGGGGCGGACGGCTGGCCGAGGCGCTGCGATCGCAGGCGGGACGGGGAGATCTGCACGCGCCCGC
CTGCCCGTCGCGCGGCGTGCTCGATCACGTGACCAGCCGGTGGGGCGTGCTCGTCCTCGTCTCGCTCCTCGAGGGCACGC
ACCGGTTCAGCGCGCTGCGCCGCAAGGTCGCCGGGGTGAGCGAGAAGATGCTCTCGCAGACGCTCCAGGCCCTGGAGCAC
GACGGCTTCGTGCGGAGGGAGGTCCACCCCGTCATCCCGCCGCGCGTCGACTACAGCCTGACCTCGCTCGGCCGCGAGGT
GGCCGGGCACGTGGAGGCGCTGACGGACTGGATCGAGGACAGCCTCCCCCGGATCCTGGCGGCGCGGGAGGAGCCGAAGA
GCCGGCCCGCCCCGGCCGGACGCGCCCGGGCTTGA

Upstream 100 bases:

>100_bases
TCTCTCCTGCGGGCGCGGGGCGCCCGGGGTGTGGGGGAATGCTTACCGTAGGGCCCGTACTAACTTGTGGGAAGTACGTA
CTTTCGAGTAAGCTACTGGC

Downstream 100 bases:

>100_bases
CGCGGCGCGCATCGACGGCTATCGAAGGCCCGCCAGGAGCGCCCATGCCCGTCCAGCTCACCGACGACGAGTTCTGCACC
ATCGCGCGGGCGCTCGCCGA

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MARTGRGGRLAEALRSQAGRGDLHAPACPSRGVLDHVTSRWGVLVLVSLLEGTHRFSALRRKVAGVSEKMLSQTLQALEH
DGFVRREVHPVIPPRVDYSLTSLGREVAGHVEALTDWIEDSLPRILAAREEPKSRPAPAGRARA

Sequences:

>Translated_144_residues
MARTGRGGRLAEALRSQAGRGDLHAPACPSRGVLDHVTSRWGVLVLVSLLEGTHRFSALRRKVAGVSEKMLSQTLQALEH
DGFVRREVHPVIPPRVDYSLTSLGREVAGHVEALTDWIEDSLPRILAAREEPKSRPAPAGRARA
>Mature_143_residues
ARTGRGGRLAEALRSQAGRGDLHAPACPSRGVLDHVTSRWGVLVLVSLLEGTHRFSALRRKVAGVSEKMLSQTLQALEHD
GFVRREVHPVIPPRVDYSLTSLGREVAGHVEALTDWIEDSLPRILAAREEPKSRPAPAGRARA

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=119, Percent_Identity=63.8655462184874, Blast_Score=159, Evalue=5e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 15695; Mature: 15564

Theoretical pI: Translated: 11.21; Mature: 11.21

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTGRGGRLAEALRSQAGRGDLHAPACPSRGVLDHVTSRWGVLVLVSLLEGTHRFSALR
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKVAGVSEKMLSQTLQALEHDGFVRREVHPVIPPRVDYSLTSLGREVAGHVEALTDWIED
HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SLPRILAAREEPKSRPAPAGRARA
HHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARTGRGGRLAEALRSQAGRGDLHAPACPSRGVLDHVTSRWGVLVLVSLLEGTHRFSALR
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKVAGVSEKMLSQTLQALEHDGFVRREVHPVIPPRVDYSLTSLGREVAGHVEALTDWIED
HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SLPRILAAREEPKSRPAPAGRARA
HHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]