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The map label for this gene is 220918355

Identifier: 220918355

GI number: 220918355

Start: 3619481

End: 3620374

Strand: Reverse

Name: 220918355

Synonym: A2cp1_3259

Alternate gene names: NA

Gene position: 3620374-3619481 (Counterclockwise)

Preceding gene: 220918356

Following gene: 220918354

Centisome position: 71.99

GC content: 70.81

Gene sequence:

>894_bases
GTGTCGAGAGCGATCGTGTTCCAGTCGGTGTTGGGGCTCGCGATGGCGTTCGGGCCGGCCGTCGCGGCCGCCCAGGCGTT
TCGCCACCAGTCCACCGTCTACTCGGATCCGAAGGAAGCCCAGCTCCGCCGGCCAGAAGGCGTGGCCTGTGGCGCGAGCG
GTGCCGTCGTGGTCGCCGACACCGGCAACGCCCGGCTGCTGCTGTACACCTACCGTGACGGTGCGCTGACCGGCGGCACG
CAGGTGAAGCTCGCCCAGGTCCCGTACCCGTACCGCGTGCAGCTCGACCCCAAGGGCGAGGTGCTGGTCCTCGACGAGAA
GCTGCGCAAGATCGTGCGGCTCGACGCCAAGGGCGCCTTCCTCGGCAACGTCGGGCTGGAGGGCGCGCCGGCGGGTGCGC
TGCCGGGCAGCTTCAAGGTGGACGGCGCGGGCAACCTGTACGTGCTGGACGTCCTGGGTCCCCGGGTGCTCGTGGCAGAT
CCCTCCGGCAAGGTGACGCGGCAGCTGGAGCTGCCCCGGGACGGCGCGCAGTTCACCGACGTGGCGGTGGACGGAGCCGG
CACGATCTTCGCCGTGGACGCGGTAGGCGCCGCGATCTGGAGCGCCGACAAGGGCGCCACCGCGTTCAAGCGCCTGACCG
AGTCGCGCAAGGACGTGATGAGCTTCCCCACCTACCTGGCATTCCACCAGGGCAAGCTGTACGTGGTGGACCAGCACGGC
AGCGGGATCGCCATCCTCGCCGCGGACGGCTCGTTCCAGGGGCGTCAGCTCGCGCTCGGCTGGAGCCCTGGCCTGGTCTA
CTACCCGGCCCAGATCTGCTTCGCGCCGGACGGGGCCGTGTTCGTGGCCGACCGCGGCAACGACCGCATCCAGGTGTTCG
ACACCAGCCGGTGA

Upstream 100 bases:

>100_bases
GCCACCGCGCTCACGGGACCGAGTACGCGCAGATGCTGCCGTTCCCGACGACCACCGACCTGTGCACGAAGTGCCACGAG
TCGTTCAAGAGGTGACGCCC

Downstream 100 bases:

>100_bases
GGAGGCGCGTGGGCCGCACCGCCGTCATCGTCGCAGTGCTGGCGCTGGCGCTCCCCGGGGCGGCCCGGCCCGGGGAGGCC
GCACACGGCGAGGGAGACGC

Product: NHL repeat containing protein

Products: NA

Alternate protein names: NHL Repeat Containing Protein; NHL Repeat Domain-Containing Protein; PKD Domain Containing Protein

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MSRAIVFQSVLGLAMAFGPAVAAAQAFRHQSTVYSDPKEAQLRRPEGVACGASGAVVVADTGNARLLLYTYRDGALTGGT
QVKLAQVPYPYRVQLDPKGEVLVLDEKLRKIVRLDAKGAFLGNVGLEGAPAGALPGSFKVDGAGNLYVLDVLGPRVLVAD
PSGKVTRQLELPRDGAQFTDVAVDGAGTIFAVDAVGAAIWSADKGATAFKRLTESRKDVMSFPTYLAFHQGKLYVVDQHG
SGIAILAADGSFQGRQLALGWSPGLVYYPAQICFAPDGAVFVADRGNDRIQVFDTSR

Sequences:

>Translated_297_residues
MSRAIVFQSVLGLAMAFGPAVAAAQAFRHQSTVYSDPKEAQLRRPEGVACGASGAVVVADTGNARLLLYTYRDGALTGGT
QVKLAQVPYPYRVQLDPKGEVLVLDEKLRKIVRLDAKGAFLGNVGLEGAPAGALPGSFKVDGAGNLYVLDVLGPRVLVAD
PSGKVTRQLELPRDGAQFTDVAVDGAGTIFAVDAVGAAIWSADKGATAFKRLTESRKDVMSFPTYLAFHQGKLYVVDQHG
SGIAILAADGSFQGRQLALGWSPGLVYYPAQICFAPDGAVFVADRGNDRIQVFDTSR
>Mature_296_residues
SRAIVFQSVLGLAMAFGPAVAAAQAFRHQSTVYSDPKEAQLRRPEGVACGASGAVVVADTGNARLLLYTYRDGALTGGTQ
VKLAQVPYPYRVQLDPKGEVLVLDEKLRKIVRLDAKGAFLGNVGLEGAPAGALPGSFKVDGAGNLYVLDVLGPRVLVADP
SGKVTRQLELPRDGAQFTDVAVDGAGTIFAVDAVGAAIWSADKGATAFKRLTESRKDVMSFPTYLAFHQGKLYVVDQHGS
GIAILAADGSFQGRQLALGWSPGLVYYPAQICFAPDGAVFVADRGNDRIQVFDTSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI84993742, Length=273, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31316; Mature: 31185

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS51125 NHL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRAIVFQSVLGLAMAFGPAVAAAQAFRHQSTVYSDPKEAQLRRPEGVACGASGAVVVAD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEECCCCCEEEEE
TGNARLLLYTYRDGALTGGTQVKLAQVPYPYRVQLDPKGEVLVLDEKLRKIVRLDAKGAF
CCCCEEEEEEECCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEHHHHHHHHEECCCCEE
LGNVGLEGAPAGALPGSFKVDGAGNLYVLDVLGPRVLVADPSGKVTRQLELPRDGAQFTD
EECCCCCCCCCCCCCCCEEECCCCCEEEEEECCCEEEEECCCCCEEEEEECCCCCCCEEE
VAVDGAGTIFAVDAVGAAIWSADKGATAFKRLTESRKDVMSFPTYLAFHQGKLYVVDQHG
EEECCCCEEEEEEHHHHHEECCCCCHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEECC
SGIAILAADGSFQGRQLALGWSPGLVYYPAQICFAPDGAVFVADRGNDRIQVFDTSR
CCEEEEEECCCCCCCEEEEECCCCEEEECEEEEECCCCEEEEEECCCCEEEEEECCC
>Mature Secondary Structure 
SRAIVFQSVLGLAMAFGPAVAAAQAFRHQSTVYSDPKEAQLRRPEGVACGASGAVVVAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEECCCCCEEEEE
TGNARLLLYTYRDGALTGGTQVKLAQVPYPYRVQLDPKGEVLVLDEKLRKIVRLDAKGAF
CCCCEEEEEEECCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEHHHHHHHHEECCCCEE
LGNVGLEGAPAGALPGSFKVDGAGNLYVLDVLGPRVLVADPSGKVTRQLELPRDGAQFTD
EECCCCCCCCCCCCCCCEEECCCCCEEEEEECCCEEEEECCCCCEEEEEECCCCCCCEEE
VAVDGAGTIFAVDAVGAAIWSADKGATAFKRLTESRKDVMSFPTYLAFHQGKLYVVDQHG
EEECCCCEEEEEEHHHHHEECCCCCHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEECC
SGIAILAADGSFQGRQLALGWSPGLVYYPAQICFAPDGAVFVADRGNDRIQVFDTSR
CCEEEEEECCCCCCCEEEEECCCCEEEECEEEEECCCCEEEEEECCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA