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The map label for this gene is wcaE [C]

Identifier: 220918345

GI number: 220918345

Start: 3606941

End: 3607726

Strand: Reverse

Name: wcaE [C]

Synonym: A2cp1_3249

Alternate gene names: 220918345

Gene position: 3607726-3606941 (Counterclockwise)

Preceding gene: 220918352

Following gene: 220918340

Centisome position: 71.73

GC content: 72.26

Gene sequence:

>786_bases
TTGCGAGTCTCCATCATTACCCCGTCGTTCAACCAGGGCGGCTTCATCGAGCGCACCGTCGAGAGCGTGCTGTCCCAGCG
CGGCGACTTCGACCTCGAATACCTGGTCGTGGACGGAGGCTCCACCGACGCGACGCTCTCGGTGTTGCGACGGTACGAGG
GGCGGCTCCGCTGGATCTCCGAGCCGGACGGCGGGCAGTGCGACGCGATCAACAAGGGCCTGCGGATGACCTCGGGCGAG
GTCGTGACCTGGCTCAACTCCGACGACACCTACGAGCCGGGGGCCGTCCAGGCCGCCGTCGAGGCGCTCCGGGGAGGCGC
GCGCTGGTGCTTCGGCGAGTGCCGGATCGTGGACGAGCACGACCGGGAGATCCGCCGCGGCGTCACCGCCTACAAGAACG
CGCAGGCGCGCCGCTACGGGCTGGCGCGCCTGCTCGGGCGCAACTTCATCTCGCAGCCCGCGACGTTCTTCCGGCGCGAT
CTCGTGGCCGAGGTGGGCCCGCTCGACGAGGCGCTGCACTTCGCCATGGACTACGATCTGTGGCTGCGCTTCGCGCGGGT
GGCGCGGCCGGTGTTCGTGCCGCGTCCACTGGCGGCGTTCCGCTGGCACGCCTCCTCCAAGACCGGCGCCCGGTACCGCA
CCGGCGCGTGGGAGGCGTTCCGCATCGCCTGCCGCCGCGCACGCGGGGTGGAGCGCCTGGCGCTCCCTGGACACCTGGCG
CGCTACGCGGCGCAGGTCGCCGTGTACCAGGCGCTGGACGTCGCCGCGGCGCTGCGCCGGCGATGA

Upstream 100 bases:

>100_bases
CTCGGCGACGAGTGCGTGCGTCAAGGCAGGAATGACGTAGCATACGCGCGGGACCGGGAAAAGCGCGCAGGTCCGGACCG
AACGCTGCCTCGGAGGGCGG

Downstream 100 bases:

>100_bases
CCTCGGCCCTACTTCTCGATCCCCACGTCCACCAGCACCGGCGCGAGCACCCGCACGAGCTCGGACGGCGCGAGCCCGAC
CAGGAAGCCCCGCGAGCCGC

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MRVSIITPSFNQGGFIERTVESVLSQRGDFDLEYLVVDGGSTDATLSVLRRYEGRLRWISEPDGGQCDAINKGLRMTSGE
VVTWLNSDDTYEPGAVQAAVEALRGGARWCFGECRIVDEHDREIRRGVTAYKNAQARRYGLARLLGRNFISQPATFFRRD
LVAEVGPLDEALHFAMDYDLWLRFARVARPVFVPRPLAAFRWHASSKTGARYRTGAWEAFRIACRRARGVERLALPGHLA
RYAAQVAVYQALDVAAALRRR

Sequences:

>Translated_261_residues
MRVSIITPSFNQGGFIERTVESVLSQRGDFDLEYLVVDGGSTDATLSVLRRYEGRLRWISEPDGGQCDAINKGLRMTSGE
VVTWLNSDDTYEPGAVQAAVEALRGGARWCFGECRIVDEHDREIRRGVTAYKNAQARRYGLARLLGRNFISQPATFFRRD
LVAEVGPLDEALHFAMDYDLWLRFARVARPVFVPRPLAAFRWHASSKTGARYRTGAWEAFRIACRRARGVERLALPGHLA
RYAAQVAVYQALDVAAALRRR
>Mature_261_residues
MRVSIITPSFNQGGFIERTVESVLSQRGDFDLEYLVVDGGSTDATLSVLRRYEGRLRWISEPDGGQCDAINKGLRMTSGE
VVTWLNSDDTYEPGAVQAAVEALRGGARWCFGECRIVDEHDREIRRGVTAYKNAQARRYGLARLLGRNFISQPATFFRRD
LVAEVGPLDEALHFAMDYDLWLRFARVARPVFVPRPLAAFRWHASSKTGARYRTGAWEAFRIACRRARGVERLALPGHLA
RYAAQVAVYQALDVAAALRRR

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788368, Length=99, Percent_Identity=42.4242424242424, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 29397; Mature: 29397

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVSIITPSFNQGGFIERTVESVLSQRGDFDLEYLVVDGGSTDATLSVLRRYEGRLRWIS
CEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCEEECC
EPDGGQCDAINKGLRMTSGEVVTWLNSDDTYEPGAVQAAVEALRGGARWCFGECRIVDEH
CCCCCCCHHHHCCCEECCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEECCCEEECHH
DREIRRGVTAYKNAQARRYGLARLLGRNFISQPATFFRRDLVAEVGPLDEALHFAMDYDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
WLRFARVARPVFVPRPLAAFRWHASSKTGARYRTGAWEAFRIACRRARGVERLALPGHLA
HHHHHHHHCCCCCCCCHHHHEECCCCCCCCCEECCCHHHHHHHHHHHCCCHHHCCCHHHH
RYAAQVAVYQALDVAAALRRR
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRVSIITPSFNQGGFIERTVESVLSQRGDFDLEYLVVDGGSTDATLSVLRRYEGRLRWIS
CEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCEEECC
EPDGGQCDAINKGLRMTSGEVVTWLNSDDTYEPGAVQAAVEALRGGARWCFGECRIVDEH
CCCCCCCHHHHCCCEECCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEECCCEEECHH
DREIRRGVTAYKNAQARRYGLARLLGRNFISQPATFFRRDLVAEVGPLDEALHFAMDYDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
WLRFARVARPVFVPRPLAAFRWHASSKTGARYRTGAWEAFRIACRRARGVERLALPGHLA
HHHHHHHHCCCCCCCCHHHHEECCCCCCCCCEECCCHHHHHHHHHHHCCCHHHCCCHHHH
RYAAQVAVYQALDVAAALRRR
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]