Click here to switch to the map view.

The map label for this gene is 220918195

Identifier: 220918195

GI number: 220918195

Start: 3426131

End: 3427390

Strand: Reverse

Name: 220918195

Synonym: A2cp1_3098

Alternate gene names: NA

Gene position: 3427390-3426131 (Counterclockwise)

Preceding gene: 220918196

Following gene: 220918194

Centisome position: 68.15

GC content: 67.86

Gene sequence:

>1260_bases
GTGGTGAGGCCGGTCCGAAATCAACTCTCGCTGCAGCCGACGGACCTCGAAGCGCTGGTCCCGGACGAGCACCCGGTTCG
CGCCATCTGGACGTTGGTCGAGCGGCTGGACCTGTCGGCGTTCTACGACGAGATCGCGTCGCGCGGCAGCAATGCTGGGC
GGCCAGCAACGGACCCGGCGGTGCTGCTCGCGCTGTGGCTGTTCGCCAACTCGGAGGGCGTGGGGAGCGCGCGGTTGCTC
GAGCGGCTGTGCGAGCGGGACGCGCCCTACCGCTGGATCTGCGGCGGGGTGCCGGTGAACCACCATACGCTCGCCGACTT
TCGCGTGGAGCACGGGAAGAAGCTCGACCGGCTCATGACGCAGGTGCTGGCCGCGCTCATGAAGGAAGGCGTGGTGCAGC
TCCGGCGCGTGGCGCAGGACGGGATGAAGGTCCGGGCGAGCGCCGGCGCGGCGAGCTTCCGGCGTCGTCAGTCACTGGAG
CGCTGCCGCAAGGAAGCCGAGGAACAGGTCCGAAAGCTCAGGCGCGAGATCGAGAGCGATCCGTCAGCTTCGACGAAGCG
TGTGCAGGCTGCGAAGGAGCGGGCCGCGCAAGCTCGGCTCGATGCCGTCGAGGCCGCACTTGCGGAGGTCGAAGTCGTCG
AGAAGCAGCGCGTCGAGCGAGACGAGAAGAAGCCCTCGGACGCGAGGCGTCGCGGCGAGATCCGCGTCAGCACCACGGAC
GCGGAGAGCCGCGTGATGAAGATGGCGGACGGTGGGTTCCGGCCCGCCTACAACGTGCAGTTCGCGACGGACGAGAGCGG
TGTCATCGTGGGCACCGACGTCACGAACAACGGTACCGACCAGCCGCACGTCGTGCCGATGCTCGACGAGATCCGGCGCC
GAACGGGCGAGACGCCACGCGAGTACCTGGTCGACGGTGGCTTCGTGACGCTCGACAACATCGAGGCCATCGCAGAGCGG
GGCGCGACTCCGTATGCGCCGCTACCGAAGCCGAAGAGCAAAGCCGTCGATCCGCACGCTCCGAAGCGCAACGACACACC
TGCGATCGGGGCATGGCGCGTGCGGATGGGCACAGAGGACGCCAAGCGCGTCTACGTGCAGCGCGGCGTCCTCGCCGAGA
GGACGAACGCAGATCTCCGTGTGCACCGGCGACTCGACCGGCTGAACGTCCGAGGGCTGGTAAAGGTGAAGACGATCGTG
CTGCTCGCCGCGATCAGCTTCAACATCATGCGTCTCATCGCGAGCAGACTCTCGGCCTAA

Upstream 100 bases:

>100_bases
ACGCGCTCTGAGAGAGCGTGAAGGAATCGGCCGGTGCCCCATGGACTGTGGCCGCCGGCCGTGATCTTCTCGGGGCGTGA
GCGAACACGAGGCGCCGCGG

Downstream 100 bases:

>100_bases
TCGCCTCCGGACGGGACTCCCGGCGCCGGACCGAGCTCCGCCGGCTGAACGAGCCCTCCGACGCCCCCGCGTCCCCGAAG
GTGGGCGCGTCTCGACCCCG

Product: transposase IS4 family protein

Products: NA

Alternate protein names: Transposase; ISPsy6 Transposase; IS4 Family Transposase; ISNCY Family Transposase; ISPpu20 Transposase; ISKpn6-Like Transposase

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MVRPVRNQLSLQPTDLEALVPDEHPVRAIWTLVERLDLSAFYDEIASRGSNAGRPATDPAVLLALWLFANSEGVGSARLL
ERLCERDAPYRWICGGVPVNHHTLADFRVEHGKKLDRLMTQVLAALMKEGVVQLRRVAQDGMKVRASAGAASFRRRQSLE
RCRKEAEEQVRKLRREIESDPSASTKRVQAAKERAAQARLDAVEAALAEVEVVEKQRVERDEKKPSDARRRGEIRVSTTD
AESRVMKMADGGFRPAYNVQFATDESGVIVGTDVTNNGTDQPHVVPMLDEIRRRTGETPREYLVDGGFVTLDNIEAIAER
GATPYAPLPKPKSKAVDPHAPKRNDTPAIGAWRVRMGTEDAKRVYVQRGVLAERTNADLRVHRRLDRLNVRGLVKVKTIV
LLAAISFNIMRLIASRLSA

Sequences:

>Translated_419_residues
MVRPVRNQLSLQPTDLEALVPDEHPVRAIWTLVERLDLSAFYDEIASRGSNAGRPATDPAVLLALWLFANSEGVGSARLL
ERLCERDAPYRWICGGVPVNHHTLADFRVEHGKKLDRLMTQVLAALMKEGVVQLRRVAQDGMKVRASAGAASFRRRQSLE
RCRKEAEEQVRKLRREIESDPSASTKRVQAAKERAAQARLDAVEAALAEVEVVEKQRVERDEKKPSDARRRGEIRVSTTD
AESRVMKMADGGFRPAYNVQFATDESGVIVGTDVTNNGTDQPHVVPMLDEIRRRTGETPREYLVDGGFVTLDNIEAIAER
GATPYAPLPKPKSKAVDPHAPKRNDTPAIGAWRVRMGTEDAKRVYVQRGVLAERTNADLRVHRRLDRLNVRGLVKVKTIV
LLAAISFNIMRLIASRLSA
>Mature_419_residues
MVRPVRNQLSLQPTDLEALVPDEHPVRAIWTLVERLDLSAFYDEIASRGSNAGRPATDPAVLLALWLFANSEGVGSARLL
ERLCERDAPYRWICGGVPVNHHTLADFRVEHGKKLDRLMTQVLAALMKEGVVQLRRVAQDGMKVRASAGAASFRRRQSLE
RCRKEAEEQVRKLRREIESDPSASTKRVQAAKERAAQARLDAVEAALAEVEVVEKQRVERDEKKPSDARRRGEIRVSTTD
AESRVMKMADGGFRPAYNVQFATDESGVIVGTDVTNNGTDQPHVVPMLDEIRRRTGETPREYLVDGGFVTLDNIEAIAER
GATPYAPLPKPKSKAVDPHAPKRNDTPAIGAWRVRMGTEDAKRVYVQRGVLAERTNADLRVHRRLDRLNVRGLVKVKTIV
LLAAISFNIMRLIASRLSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46747; Mature: 46747

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRPVRNQLSLQPTDLEALVPDEHPVRAIWTLVERLDLSAFYDEIASRGSNAGRPATDPA
CCCCCCHHCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
VLLALWLFANSEGVGSARLLERLCERDAPYRWICGGVPVNHHTLADFRVEHGKKLDRLMT
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
QVLAALMKEGVVQLRRVAQDGMKVRASAGAASFRRRQSLERCRKEAEEQVRKLRREIESD
HHHHHHHHHHHHHHHHHHHHCCEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PSASTKRVQAAKERAAQARLDAVEAALAEVEVVEKQRVERDEKKPSDARRRGEIRVSTTD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEECC
AESRVMKMADGGFRPAYNVQFATDESGVIVGTDVTNNGTDQPHVVPMLDEIRRRTGETPR
HHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCEEHHHHHHHHHCCCCCH
EYLVDGGFVTLDNIEAIAERGATPYAPLPKPKSKAVDPHAPKRNDTPAIGAWRVRMGTED
HHHHCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHH
AKRVYVQRGVLAERTNADLRVHRRLDRLNVRGLVKVKTIVLLAAISFNIMRLIASRLSA
HHHHHHHHCHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVRPVRNQLSLQPTDLEALVPDEHPVRAIWTLVERLDLSAFYDEIASRGSNAGRPATDPA
CCCCCCHHCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
VLLALWLFANSEGVGSARLLERLCERDAPYRWICGGVPVNHHTLADFRVEHGKKLDRLMT
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
QVLAALMKEGVVQLRRVAQDGMKVRASAGAASFRRRQSLERCRKEAEEQVRKLRREIESD
HHHHHHHHHHHHHHHHHHHHCCEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PSASTKRVQAAKERAAQARLDAVEAALAEVEVVEKQRVERDEKKPSDARRRGEIRVSTTD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEECC
AESRVMKMADGGFRPAYNVQFATDESGVIVGTDVTNNGTDQPHVVPMLDEIRRRTGETPR
HHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCEEHHHHHHHHHCCCCCH
EYLVDGGFVTLDNIEAIAERGATPYAPLPKPKSKAVDPHAPKRNDTPAIGAWRVRMGTED
HHHHCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHH
AKRVYVQRGVLAERTNADLRVHRRLDRLNVRGLVKVKTIVLLAAISFNIMRLIASRLSA
HHHHHHHHCHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA