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The map label for this gene is fliF [H]

Identifier: 220917658

GI number: 220917658

Start: 2836897

End: 2838498

Strand: Direct

Name: fliF [H]

Synonym: A2cp1_2559

Alternate gene names: 220917658

Gene position: 2836897-2838498 (Clockwise)

Preceding gene: 220917657

Following gene: 220917659

Centisome position: 56.41

GC content: 78.96

Gene sequence:

>1602_bases
ATGGAGCCCCTCCTCAAGCAGCTCCGCGAGCTGCCGCGCCTCCTCGGCGCCCTCCCCGCCGGCCTGAAGCTGGTGCTGGT
GGCGGGCGCGCTCGTCGCCATCGGCGTCGCCGCGCTCAGCGCGGTGCGCTCCTCCGAGGCGTACCAGTACGCCTTCACCA
ACCTCACGCCGGAGGACTCGGCCGAGGCGGCCGGCGCCCTCGGCGCGGCCGGCGTCCCGTATCGCCTGGAGGCGGGCGGC
TCCGCGCTGGCGGTGCCCGCGTCGCGCGTGTACGACGCCCGCCTGCTGCTGGCCGGCGCCGGCCTCCCCCGCGGCGGGGG
GGTGGGCTTCGAGATCTTCGACCGCGGCGACCTGGGCGTCTCCGAGTTCACGCAGAAGGTGAACCTGCGCCGCGCGACCG
AGGGCGAGCTGGCCCGCACCATCTCGCGCCTCGCGCAGGTCCGCTCCGCGCGCGTGCACCTCACGCTCCCGGAGAAGGGG
CTGTACCGCGACCAGGACCGCCCCGCCGCCGCGGCGGTGGTGGTGAACCTGCAGCCGGGGCGCACGCTCGACCAGCGCGA
GATCTCCGGCATCCGGCACCTGGTGTCGTCCGCGGTCGCCGGGCTGGCGCCGGCGGGGGTCTCGGTGGTGGACGGCCGCG
GCGAGGTGCTCTCCGACGAGGGCCCGCTGGGCGAGGCCATGGGCTACCAGCGCCGCATGGAGCGCGACCTGGAGCGGCGC
ATCGTGGACCTGCTCGGCCAGGCGGTGGGACCGGGCGCGGTGGTGGCGCGGGTGACCGCCTCGCTCGACCAGACCGAGGT
CCAGAGCAGCGCCCAGGTCCTCGACCCCGACTCGGCCACGCTGCGCAGCGAGCGCAAGCTCACCCAGCAGTCGTCGAGCG
ACGGCGCGGGCCCGGCCGGCGTGGCGGGCGCCGCCGCCAACCAGCCGCTCGCGCCGCCGGCGCCGGCGGCCGGCGCGCGC
GGGCGCAGCAGCGCCTCCACCGAGGACCAGACCCGCAACTACGACGTCTCCACCACCACCACCACCTCGGTGGCGCGCGT
CCCGCGCCTGGAGCGGATCTCGGTGGCCGTGCTGGTGGACGGCGCCGCGGGGGCGCCTCGCGCCGACGCGGAGATCGCGC
GGCTGGGCGAGCTCGCCAAGCGCGCGGTGGGCTTCGACGCCGACCGCGGCGACACCTTCGAGATCTCCTCGTCGCCGTTC
GTGCGCGCCGAGGAGCCCGCCCCGCCCCCGGCGCCCCCGCCGGCCCTGCTCGAGCGCCCCGCGGTGCGGTGGGGCGCGCT
GGGCGCGGGCGCGCTCGTCGGCCTCGCGCTGCTCGCGGCCGCGCTGCGGCGCCGCCGGGCGCCGGCCGCGCCCGAGGTGC
TGCCCATCCGGCCCGGCGCCCGCGTGGCCGAGATCGAGGCGGCGCTCGCCCGCGACGCCGCGCTCCCCGGCGCGCCGCCA
CCGCGCCCGGCGGCGCTGGCCGATCCGTCCGCCACCCTGCGCGACCGCGCCCGCGACCTCGCCTCGCAGGACCCCACCCG
CACCGCCCACCTCCTGAAGGCCTGGATCGCCCAGGAGCCCGGCCAGCCGGTCCAGCCCGAGCGGAGCAACGCCGATGCCT
GA

Upstream 100 bases:

>100_bases
CGTGGCGATGCGGGTGGCCACGCGCGTCCGCAACAAGCTCGTCGAGGCCTACCAGGAAGTCATGCGGATGAGCGTGTAGC
GCCGCGCTCCGGACACGTCC

Downstream 100 bases:

>100_bases
CCTCGCCCCCGCCCCGCCCAGCCCGTCCCCGGCGTCCGCCCCCGAGCGCCCCGGTCCCGGCGCGCAGCGCGCCGCCGCCG
TGCTGCTCGGCGTCGGCCCG

Product: flagellar M-ring protein FliF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MEPLLKQLRELPRLLGALPAGLKLVLVAGALVAIGVAALSAVRSSEAYQYAFTNLTPEDSAEAAGALGAAGVPYRLEAGG
SALAVPASRVYDARLLLAGAGLPRGGGVGFEIFDRGDLGVSEFTQKVNLRRATEGELARTISRLAQVRSARVHLTLPEKG
LYRDQDRPAAAAVVVNLQPGRTLDQREISGIRHLVSSAVAGLAPAGVSVVDGRGEVLSDEGPLGEAMGYQRRMERDLERR
IVDLLGQAVGPGAVVARVTASLDQTEVQSSAQVLDPDSATLRSERKLTQQSSSDGAGPAGVAGAAANQPLAPPAPAAGAR
GRSSASTEDQTRNYDVSTTTTTSVARVPRLERISVAVLVDGAAGAPRADAEIARLGELAKRAVGFDADRGDTFEISSSPF
VRAEEPAPPPAPPPALLERPAVRWGALGAGALVGLALLAAALRRRRAPAAPEVLPIRPGARVAEIEAALARDAALPGAPP
PRPAALADPSATLRDRARDLASQDPTRTAHLLKAWIAQEPGQPVQPERSNADA

Sequences:

>Translated_533_residues
MEPLLKQLRELPRLLGALPAGLKLVLVAGALVAIGVAALSAVRSSEAYQYAFTNLTPEDSAEAAGALGAAGVPYRLEAGG
SALAVPASRVYDARLLLAGAGLPRGGGVGFEIFDRGDLGVSEFTQKVNLRRATEGELARTISRLAQVRSARVHLTLPEKG
LYRDQDRPAAAAVVVNLQPGRTLDQREISGIRHLVSSAVAGLAPAGVSVVDGRGEVLSDEGPLGEAMGYQRRMERDLERR
IVDLLGQAVGPGAVVARVTASLDQTEVQSSAQVLDPDSATLRSERKLTQQSSSDGAGPAGVAGAAANQPLAPPAPAAGAR
GRSSASTEDQTRNYDVSTTTTTSVARVPRLERISVAVLVDGAAGAPRADAEIARLGELAKRAVGFDADRGDTFEISSSPF
VRAEEPAPPPAPPPALLERPAVRWGALGAGALVGLALLAAALRRRRAPAAPEVLPIRPGARVAEIEAALARDAALPGAPP
PRPAALADPSATLRDRARDLASQDPTRTAHLLKAWIAQEPGQPVQPERSNADA
>Mature_533_residues
MEPLLKQLRELPRLLGALPAGLKLVLVAGALVAIGVAALSAVRSSEAYQYAFTNLTPEDSAEAAGALGAAGVPYRLEAGG
SALAVPASRVYDARLLLAGAGLPRGGGVGFEIFDRGDLGVSEFTQKVNLRRATEGELARTISRLAQVRSARVHLTLPEKG
LYRDQDRPAAAAVVVNLQPGRTLDQREISGIRHLVSSAVAGLAPAGVSVVDGRGEVLSDEGPLGEAMGYQRRMERDLERR
IVDLLGQAVGPGAVVARVTASLDQTEVQSSAQVLDPDSATLRSERKLTQQSSSDGAGPAGVAGAAANQPLAPPAPAAGAR
GRSSASTEDQTRNYDVSTTTTTSVARVPRLERISVAVLVDGAAGAPRADAEIARLGELAKRAVGFDADRGDTFEISSSPF
VRAEEPAPPPAPPPALLERPAVRWGALGAGALVGLALLAAALRRRRAPAAPEVLPIRPGARVAEIEAALARDAALPGAPP
PRPAALADPSATLRDRARDLASQDPTRTAHLLKAWIAQEPGQPVQPERSNADA

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=413, Percent_Identity=36.0774818401937, Blast_Score=238, Evalue=5e-64,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 55115; Mature: 55115

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPLLKQLRELPRLLGALPAGLKLVLVAGALVAIGVAALSAVRSSEAYQYAFTNLTPEDS
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
AEAAGALGAAGVPYRLEAGGSALAVPASRVYDARLLLAGAGLPRGGGVGFEIFDRGDLGV
HHHHHCCCCCCCCEEEECCCCEEECCHHHHHHHHHEEECCCCCCCCCCCEEEECCCCCCH
SEFTQKVNLRRATEGELARTISRLAQVRSARVHLTLPEKGLYRDQDRPAAAAVVVNLQPG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCEEEEEEECCCC
RTLDQREISGIRHLVSSAVAGLAPAGVSVVDGRGEVLSDEGPLGEAMGYQRRMERDLERR
CCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHH
IVDLLGQAVGPGAVVARVTASLDQTEVQSSAQVLDPDSATLRSERKLTQQSSSDGAGPAG
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC
VAGAAANQPLAPPAPAAGARGRSSASTEDQTRNYDVSTTTTTSVARVPRLERISVAVLVD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHCCCHHHEEEEEEEE
GAAGAPRADAEIARLGELAKRAVGFDADRGDTFEISSSPFVRAEEPAPPPAPPPALLERP
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEECCCCCCCCCCCHHHHCCC
AVRWGALGAGALVGLALLAAALRRRRAPAAPEVLPIRPGARVAEIEAALARDAALPGAPP
CHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCC
PRPAALADPSATLRDRARDLASQDPTRTAHLLKAWIAQEPGQPVQPERSNADA
CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEPLLKQLRELPRLLGALPAGLKLVLVAGALVAIGVAALSAVRSSEAYQYAFTNLTPEDS
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
AEAAGALGAAGVPYRLEAGGSALAVPASRVYDARLLLAGAGLPRGGGVGFEIFDRGDLGV
HHHHHCCCCCCCCEEEECCCCEEECCHHHHHHHHHEEECCCCCCCCCCCEEEECCCCCCH
SEFTQKVNLRRATEGELARTISRLAQVRSARVHLTLPEKGLYRDQDRPAAAAVVVNLQPG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCEEEEEEECCCC
RTLDQREISGIRHLVSSAVAGLAPAGVSVVDGRGEVLSDEGPLGEAMGYQRRMERDLERR
CCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHH
IVDLLGQAVGPGAVVARVTASLDQTEVQSSAQVLDPDSATLRSERKLTQQSSSDGAGPAG
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC
VAGAAANQPLAPPAPAAGARGRSSASTEDQTRNYDVSTTTTTSVARVPRLERISVAVLVD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHCCCHHHEEEEEEEE
GAAGAPRADAEIARLGELAKRAVGFDADRGDTFEISSSPFVRAEEPAPPPAPPPALLERP
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEECCCCCCCCCCCHHHHCCC
AVRWGALGAGALVGLALLAAALRRRRAPAAPEVLPIRPGARVAEIEAALARDAALPGAPP
CHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCC
PRPAALADPSATLRDRARDLASQDPTRTAHLLKAWIAQEPGQPVQPERSNADA
CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2544561; 11677609; 1551848 [H]