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The map label for this gene is yscN [H]

Identifier: 220917455

GI number: 220917455

Start: 2608285

End: 2609592

Strand: Reverse

Name: yscN [H]

Synonym: A2cp1_2355

Alternate gene names: 220917455

Gene position: 2609592-2608285 (Counterclockwise)

Preceding gene: 220917456

Following gene: 220917454

Centisome position: 51.89

GC content: 80.35

Gene sequence:

>1308_bases
GTGACCGTGGACCTGGGGCGGGTGCGCGCCGCGCTCGGGGAGGCCGCGCCGCTGCCGCTGCGCGGGCGGGTGACCCGCCT
GACCGGCCTGGTGCTGGAGGCGGCGGTGGGCGGCGTGCGGCAGGGCGAGGCGGTGGAGATCCGCGCGCCCGGGCGCGAGC
CGCTGCAGGCGGAGGTGGTCGGCCTGCGCGACGACCGGGCGGTGCTGGTGCCGTTCGGCGACCTCGGCGGCGTCGGCCTC
GACGCGGAGGTCGTCCCGACCGGCCGCGCGCACACCATCCGCGCCGGGCCTGGGCTGCTGGGGCGGGTGCTGGACGGCCT
GGGCCGGCCGCTCGACGGCGCGCCGCTGCCGGCCGGGCTGGAGGAGTGGGCGGTGGATCGGCCCGCGCCGAACCCGCTCG
CGCGCCGCCCGGTGGCGGCGCCGCTCCCGCTCGGCGTCCGGGTGCTGGACGGGTTCCTCACCGCCGGCGAGGGGCAGCGG
ATCGGGCTGTTCGCCGGCTCCGGCGTGGGGAAGTCCACGCTCCTCGGCCAGCTCGCCCGCGGCGCGCGCGCCGACCTGTG
CGTGGTGTGCCTGGTGGGCGAGCGCGGGCGCGAGGTGCGCGAGTTCCTGGAGGGCCCGCTGGGCGCGGAGGGCCTGGCCC
GCAGCGTGGTGGTGGCGGCCACCAGCGACGCGCCGGCGCTGGTGCGCCTGAAGGCGGCGCACGTGGCCACCGCGGTGGCG
GAGTGGTTCGCGGAGCGCGGCGACCGGGTGCTGCTCCTGGTGGACTCGGTGACCCGCTACGCCCGCGCGCTCCGCGAGGT
CGGGCTCGCGGCGGGCGAGCCGCCGGCGCGCCAGGGCTACCCGCCCTCGGTGTTCGCGGCGCTCCCGCGGTTGCTGGAGC
GGGCCGGCAACCGCGCCCGCGGCGGGATCACCGCCGTGTACACGGTGCTCGTGGCGGGCGGCGACCTCGAGGAGCCGATC
GCCGACGAGGTCCGCGGCATCCTCGACGGCCACGTGGTGCTCGACCGCGCCGTGGCGTCCGGCGGCCGCTTCCCCGCGGT
GGACCCGCTGCAGAGCCTTTCGCGCGTCATGCCGGCGGTGGCGGCCCCGGCGCACCTGGCGGCGGCGGGCCGGGTGCGGG
CGCTGCTCGCGGCGCACGCCCGGGTGCGCGACCTGGTGGCGCTCGGCGCCTACCGGGCCGGCGCGGATCCCGAGGCGGAC
CTGGCCCTGGCCCGGCTGCCGGCGATCGAGGCGTTCCTCCGGCAGCCGCTCGGCGAGGCGGCGCCGTTCGAGGAGACGCT
CCGGCGGCTCGAGGCGCTGGCTGGGTGA

Upstream 100 bases:

>100_bases
TCCCGCGCGGCGCGGTGGTGGTCGAGACCGAGGGCGGGCGCATCGACGCGCGCGTGGAGGCCCAGCTCGCCGCCCTGGAG
CGCGCGCTGGAGGAGGCGCC

Downstream 100 bases:

>100_bases
GCGGCGACGCGTTCCCGCTCGCCGCGCTGGAGGCGCTGCGCCGCCGCGAGGAGGACGCGGCGGGCGCGGCGGTCGCCGCG
GCGCGGCGGGAGCTCGACGC

Product: FliI/YscN family ATPase

Products: NA

Alternate protein names: Yop proteins secretion ATPase [H]

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MTVDLGRVRAALGEAAPLPLRGRVTRLTGLVLEAAVGGVRQGEAVEIRAPGREPLQAEVVGLRDDRAVLVPFGDLGGVGL
DAEVVPTGRAHTIRAGPGLLGRVLDGLGRPLDGAPLPAGLEEWAVDRPAPNPLARRPVAAPLPLGVRVLDGFLTAGEGQR
IGLFAGSGVGKSTLLGQLARGARADLCVVCLVGERGREVREFLEGPLGAEGLARSVVVAATSDAPALVRLKAAHVATAVA
EWFAERGDRVLLLVDSVTRYARALREVGLAAGEPPARQGYPPSVFAALPRLLERAGNRARGGITAVYTVLVAGGDLEEPI
ADEVRGILDGHVVLDRAVASGGRFPAVDPLQSLSRVMPAVAAPAHLAAAGRVRALLAAHARVRDLVALGAYRAGADPEAD
LALARLPAIEAFLRQPLGEAAPFEETLRRLEALAG

Sequences:

>Translated_435_residues
MTVDLGRVRAALGEAAPLPLRGRVTRLTGLVLEAAVGGVRQGEAVEIRAPGREPLQAEVVGLRDDRAVLVPFGDLGGVGL
DAEVVPTGRAHTIRAGPGLLGRVLDGLGRPLDGAPLPAGLEEWAVDRPAPNPLARRPVAAPLPLGVRVLDGFLTAGEGQR
IGLFAGSGVGKSTLLGQLARGARADLCVVCLVGERGREVREFLEGPLGAEGLARSVVVAATSDAPALVRLKAAHVATAVA
EWFAERGDRVLLLVDSVTRYARALREVGLAAGEPPARQGYPPSVFAALPRLLERAGNRARGGITAVYTVLVAGGDLEEPI
ADEVRGILDGHVVLDRAVASGGRFPAVDPLQSLSRVMPAVAAPAHLAAAGRVRALLAAHARVRDLVALGAYRAGADPEAD
LALARLPAIEAFLRQPLGEAAPFEETLRRLEALAG
>Mature_434_residues
TVDLGRVRAALGEAAPLPLRGRVTRLTGLVLEAAVGGVRQGEAVEIRAPGREPLQAEVVGLRDDRAVLVPFGDLGGVGLD
AEVVPTGRAHTIRAGPGLLGRVLDGLGRPLDGAPLPAGLEEWAVDRPAPNPLARRPVAAPLPLGVRVLDGFLTAGEGQRI
GLFAGSGVGKSTLLGQLARGARADLCVVCLVGERGREVREFLEGPLGAEGLARSVVVAATSDAPALVRLKAAHVATAVAE
WFAERGDRVLLLVDSVTRYARALREVGLAAGEPPARQGYPPSVFAALPRLLERAGNRARGGITAVYTVLVAGGDLEEPIA
DEVRGILDGHVVLDRAVASGGRFPAVDPLQSLSRVMPAVAAPAHLAAAGRVRALLAAHARVRDLVALGAYRAGADPEADL
ALARLPAIEAFLRQPLGEAAPFEETLRRLEALAG

Specific function: Is a component of the Yop secretion machinery using ATP, and it is either the energizer of this machinery, or part of it [H]

COG id: COG1157

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway ATPase

Gene ontology:

Cell location: Cytoplasm. Note=But connected to the inner membrane possibly through LcrD (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=373, Percent_Identity=29.7587131367292, Blast_Score=145, Evalue=6e-35,
Organism=Homo sapiens, GI50345984, Length=404, Percent_Identity=27.4752475247525, Blast_Score=122, Evalue=9e-28,
Organism=Homo sapiens, GI4757810, Length=404, Percent_Identity=27.4752475247525, Blast_Score=122, Evalue=9e-28,
Organism=Homo sapiens, GI19913424, Length=334, Percent_Identity=28.4431137724551, Blast_Score=112, Evalue=6e-25,
Organism=Homo sapiens, GI19913428, Length=418, Percent_Identity=24.6411483253589, Blast_Score=109, Evalue=5e-24,
Organism=Homo sapiens, GI19913426, Length=418, Percent_Identity=24.6411483253589, Blast_Score=104, Evalue=2e-22,
Organism=Escherichia coli, GI1788251, Length=424, Percent_Identity=50, Blast_Score=351, Evalue=5e-98,
Organism=Escherichia coli, GI1790170, Length=335, Percent_Identity=33.4328358208955, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1790172, Length=371, Percent_Identity=28.5714285714286, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1790217, Length=243, Percent_Identity=29.6296296296296, Blast_Score=74, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI25144756, Length=370, Percent_Identity=31.0810810810811, Blast_Score=143, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI71988080, Length=351, Percent_Identity=29.3447293447293, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI71988063, Length=351, Percent_Identity=29.3447293447293, Blast_Score=127, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17565854, Length=344, Percent_Identity=28.1976744186047, Blast_Score=118, Evalue=8e-27,
Organism=Caenorhabditis elegans, GI71988074, Length=331, Percent_Identity=28.0966767371601, Blast_Score=111, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI17510931, Length=371, Percent_Identity=25.3369272237197, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17570191, Length=385, Percent_Identity=25.1948051948052, Blast_Score=106, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6319370, Length=378, Percent_Identity=31.2169312169312, Blast_Score=146, Evalue=5e-36,
Organism=Saccharomyces cerevisiae, GI6322581, Length=435, Percent_Identity=29.4252873563218, Blast_Score=145, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6319603, Length=348, Percent_Identity=28.1609195402299, Blast_Score=136, Evalue=7e-33,
Organism=Saccharomyces cerevisiae, GI6320016, Length=255, Percent_Identity=30.5882352941176, Blast_Score=92, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24638766, Length=376, Percent_Identity=30.5851063829787, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI28574560, Length=353, Percent_Identity=29.7450424929178, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI24658560, Length=423, Percent_Identity=26.4775413711584, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24583992, Length=335, Percent_Identity=28.6567164179104, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24583988, Length=335, Percent_Identity=28.3582089552239, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI24583986, Length=335, Percent_Identity=28.3582089552239, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI24583984, Length=335, Percent_Identity=28.3582089552239, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI20129479, Length=342, Percent_Identity=27.1929824561404, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI281361666, Length=388, Percent_Identity=25.2577319587629, Blast_Score=102, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24646341, Length=388, Percent_Identity=25.2577319587629, Blast_Score=102, Evalue=6e-22,
Organism=Drosophila melanogaster, GI17136796, Length=388, Percent_Identity=25.2577319587629, Blast_Score=102, Evalue=6e-22,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR004100
- InterPro:   IPR005714
- InterPro:   IPR013380 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 44974; Mature: 44842

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVDLGRVRAALGEAAPLPLRGRVTRLTGLVLEAAVGGVRQGEAVEIRAPGREPLQAEVV
CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEE
GLRDDRAVLVPFGDLGGVGLDAEVVPTGRAHTIRAGPGLLGRVLDGLGRPLDGAPLPAGL
EECCCCEEEEECCCCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCH
EEWAVDRPAPNPLARRPVAAPLPLGVRVLDGFLTAGEGQRIGLFAGSGVGKSTLLGQLAR
HHHCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHC
GARADLCVVCLVGERGREVREFLEGPLGAEGLARSVVVAATSDAPALVRLKAAHVATAVA
CCCCCEEEEEEECCCCHHHHHHHCCCCCHHHHHCEEEEEECCCCCHHEEHHHHHHHHHHH
EWFAERGDRVLLLVDSVTRYARALREVGLAAGEPPARQGYPPSVFAALPRLLERAGNRAR
HHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
GGITAVYTVLVAGGDLEEPIADEVRGILDGHVVLDRAVASGGRFPAVDPLQSLSRVMPAV
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
AAPAHLAAAGRVRALLAAHARVRDLVALGAYRAGADPEADLALARLPAIEAFLRQPLGEA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
APFEETLRRLEALAG
CCHHHHHHHHHHHCC
>Mature Secondary Structure 
TVDLGRVRAALGEAAPLPLRGRVTRLTGLVLEAAVGGVRQGEAVEIRAPGREPLQAEVV
CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEE
GLRDDRAVLVPFGDLGGVGLDAEVVPTGRAHTIRAGPGLLGRVLDGLGRPLDGAPLPAGL
EECCCCEEEEECCCCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCH
EEWAVDRPAPNPLARRPVAAPLPLGVRVLDGFLTAGEGQRIGLFAGSGVGKSTLLGQLAR
HHHCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHC
GARADLCVVCLVGERGREVREFLEGPLGAEGLARSVVVAATSDAPALVRLKAAHVATAVA
CCCCCEEEEEEECCCCHHHHHHHCCCCCHHHHHCEEEEEECCCCCHHEEHHHHHHHHHHH
EWFAERGDRVLLLVDSVTRYARALREVGLAAGEPPARQGYPPSVFAALPRLLERAGNRAR
HHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
GGITAVYTVLVAGGDLEEPIADEVRGILDGHVVLDRAVASGGRFPAVDPLQSLSRVMPAV
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
AAPAHLAAAGRVRALLAAHARVRDLVALGAYRAGADPEADLALARLPAIEAFLRQPLGEA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
APFEETLRRLEALAG
CCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8132449; 2160939 [H]