| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is trxA [H]
Identifier: 220917442
GI number: 220917442
Start: 2596886
End: 2597284
Strand: Reverse
Name: trxA [H]
Synonym: A2cp1_2342
Alternate gene names: 220917442
Gene position: 2597284-2596886 (Counterclockwise)
Preceding gene: 220917443
Following gene: 220917441
Centisome position: 51.64
GC content: 69.42
Gene sequence:
>399_bases ATGGCGCACGCGACGGTCGAGATCACCTCGCAGAACTTCAAGGACGTCGTCGAGAAGGACGGCATCGTCCTCATCGACTG GTGGGCCACCTGGTGCGGCCCGTGCCGGTCGTTCGGCCCCACGTACGAGAAGGTCGCGGGCAAGCACCCGGACCTCACCT TCGGGAAGGTGAACACCGAGGAGCAGCAGGAGCTCGCGGCGGCGTTCGACATCCGGTCGATCCCCACGCTGATGATCCTG CGCGACAAGGTGCTGCTCTTCTCGCAGGCCGGCGCGCTGCCCGAGGCCGCGCTGGAGGACCTCATCCGCCAGGTGCGCGC GCTCGACATGGACAAGGTCCGCGCCGACGTCGCCGCGCAGGAGGCGGAGGCGGCGAAGCGCAGCAGCGCCTCGGCCTGA
Upstream 100 bases:
>100_bases GGCGGGGGCGCGCGGCGAACCCTTTTCCCCGCGGCGGGGTCGAACTCCGTGTCAGCGCCCCGGAGGCCGATGGACGGCGG GCGCGGAGAGGCACGGAGAC
Downstream 100 bases:
>100_bases TCCCGTCCCCCGCGGCCGGCGCAAAGAGGAAGGGCGGATGGCCGCGAGGCCACCCGCCCTTCGAGTCTCCGGGCCTCGCG GGGCTACTTCGTCCCGCCGG
Product: thioredoxin
Products: NA
Alternate protein names: Trx [H]
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MAHATVEITSQNFKDVVEKDGIVLIDWWATWCGPCRSFGPTYEKVAGKHPDLTFGKVNTEEQQELAAAFDIRSIPTLMIL RDKVLLFSQAGALPEAALEDLIRQVRALDMDKVRADVAAQEAEAAKRSSASA
Sequences:
>Translated_132_residues MAHATVEITSQNFKDVVEKDGIVLIDWWATWCGPCRSFGPTYEKVAGKHPDLTFGKVNTEEQQELAAAFDIRSIPTLMIL RDKVLLFSQAGALPEAALEDLIRQVRALDMDKVRADVAAQEAEAAKRSSASA >Mature_131_residues AHATVEITSQNFKDVVEKDGIVLIDWWATWCGPCRSFGPTYEKVAGKHPDLTFGKVNTEEQQELAAAFDIRSIPTLMILR DKVLLFSQAGALPEAALEDLIRQVRALDMDKVRADVAAQEAEAAKRSSASA
Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI4758304, Length=81, Percent_Identity=37.037037037037, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1788936, Length=101, Percent_Identity=38.6138613861386, Blast_Score=84, Evalue=2e-18, Organism=Escherichia coli, GI87082331, Length=104, Percent_Identity=31.7307692307692, Blast_Score=75, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71980562, Length=117, Percent_Identity=29.0598290598291, Blast_Score=70, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71980565, Length=101, Percent_Identity=31.6831683168317, Blast_Score=70, Evalue=3e-13, Organism=Caenorhabditis elegans, GI212646193, Length=93, Percent_Identity=32.258064516129, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6323072, Length=88, Percent_Identity=30.6818181818182, Blast_Score=68, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6319925, Length=92, Percent_Identity=30.4347826086957, Blast_Score=65, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6321648, Length=77, Percent_Identity=35.0649350649351, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: 1.8.1.8 [C]
Molecular weight: Translated: 14503; Mature: 14371
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHATVEITSQNFKDVVEKDGIVLIDWWATWCGPCRSFGPTYEKVAGKHPDLTFGKVNTE CCCEEEEECCHHHHHHHHCCCEEEEECHHHHHHHHHCCCCCHHHHCCCCCCCEECCCCCH EQQELAAAFDIRSIPTLMILRDKVLLFSQAGALPEAALEDLIRQVRALDMDKVRADVAAQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH EAEAAKRSSASA HHHHHHHCCCCC >Mature Secondary Structure AHATVEITSQNFKDVVEKDGIVLIDWWATWCGPCRSFGPTYEKVAGKHPDLTFGKVNTE CCEEEEECCHHHHHHHHCCCEEEEECHHHHHHHHHCCCCCHHHHCCCCCCCEECCCCCH EQQELAAAFDIRSIPTLMILRDKVLLFSQAGALPEAALEDLIRQVRALDMDKVRADVAAQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH EAEAAKRSSASA HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]