| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220917387
Identifier: 220917387
GI number: 220917387
Start: 2536891
End: 2538297
Strand: Direct
Name: 220917387
Synonym: A2cp1_2287
Alternate gene names: NA
Gene position: 2536891-2538297 (Clockwise)
Preceding gene: 220917385
Following gene: 220917388
Centisome position: 50.44
GC content: 75.62
Gene sequence:
>1407_bases ATGCCCTCGTCCCGTTCCGGAGCCGACTGGCTGCGTCACCCGGTGAGCCTCGCCGGGGCGGCGCTGGCCACGGTCTCCGG CGTCCTGGTGGTGGTGCTGTTCGCCGCCAGCCTGCTCGGCCTGGAGGGCGGCCCGTACCTCGGCATCCTCGCGTACCTGC TGCTCCCCGGGCTGCTGGTGGCGGGCCTGATCCTCGTGCCGGTGGGCGCGGCGCTGGAGCGCCGGCGGCTGGTGCGCCTC GCGGCCCGCGGCGCCGCGGAGCCGCCGCTCCCGGTGATGGACCTGAACCACCCGCGCACCCGGCGGCGCCTGCTGGTGTT CCTCGGCCTCACCACGGTGAACCTCCTGCTGCTGGGCATCGCCTCGTACAAGGGGCTCGAGGTGATGGACTCGCCGGCGT TCTGCGGGTCGTGCCACAGCGTGATGGACCCGGAGGCCTCGGCGCACCGGCGCTCCGCGCACGCGCGGGTCGCGTGCGTC GAGTGCCACATCGGCCCGGGCGCGAGCTGGTTCGTGAAGTCGAAGCTCTCCGGCGCCTGGCAGGTGGTGTCGGTCGCGCT CGACCTCTACCCGCGGCCCATCCCCACGCCGGTCCAGAACCTGCGCCCGGCGCGCGACACCTGCGAGCAGTGCCACTGGC CCACCAAGCTGGTGGGCGACCGGCTGAAGGTGATCACCCGCCACGCCGAGGACGCCGGCAGCACGCCGCTGCGGACCGTG CTGGTGGTCCACGTGGGCGGCGCACAGGGGCTCGGGGCGCGGACTCGCGGCATCCACTGGCACGTGGACCCCGGGGTGCG CATCCGCTACCTCGCCGACGAGAAGCGCGAGACCATCGGGACGGTCGAGCTGACCGGCCCGGACGGCGCACGCGCCACGT TCCGCTCGAAGGCGCCCGCCGGCGAGGCGCGCTGGCGCGAGATGGACTGCGTGGACTGCCACAACCGGCCCACGCACGTG TACCGGTCGCCGGAGGACGAGGTGGACGCGGCGGTGGCGGCGGGGCGCATCGACGCGGCGGCGCTCCCGTTCGCGCGCCG CGAGGCGCTGAAGGCGCTCCGCGCCGGGTACCCGTCCCACGAGGCCGCCCGGGCCGGGATCGCGGCGGCGCTCGGCGCGT TCTACGCCGGCCCGGAGGGCGGCGGCGCGCCACGCGAGGCGGTGGAGCGCGCCGCGAGCGAGCTCGGCGACGCGTGGGCG CGCAACGTGTGGCCCTCGATGCGCATCGCCTGGGGGACCTATCCGTCGCTGCTCGGCCACGAGGCCGCGCCCGGGTGCTT CCGCTGCCACGACGGCGACCACGAGACCGAGGACGGCCGGGCCATCCGCGCGGACTGCGATCTGTGCCACGAGATCCTCG CGCAGGAGGAGAAGGATCCGGCCGTCCTGAAGCTGCTCGCCCCGTGA
Upstream 100 bases:
>100_bases GCCGAGCGACGCAGGGGCGCTCCGGGCGGCACCCCCGCCACCGCCCGGCGCTAGAGTGGCGCGCGCGCAGCGGATTCCGC GCGGCGCAGGAGCGCGCCCC
Downstream 100 bases:
>100_bases GAACGTTGGCGCCCAAACGGTCTCGCGGCGCGCGCTTCCGCTCCCGCCGCGGCGGCACGCGTGGTACCTTGGGCCGCCAT GCCGATGCCCCGAGCCGTGC
Product: cytochrome c family protein
Products: NA
Alternate protein names: Cytochrome C Domain Protein; Cytochrome C; NapC/NirT Cytochrome C Domain Protein
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MPSSRSGADWLRHPVSLAGAALATVSGVLVVVLFAASLLGLEGGPYLGILAYLLLPGLLVAGLILVPVGAALERRRLVRL AARGAAEPPLPVMDLNHPRTRRRLLVFLGLTTVNLLLLGIASYKGLEVMDSPAFCGSCHSVMDPEASAHRRSAHARVACV ECHIGPGASWFVKSKLSGAWQVVSVALDLYPRPIPTPVQNLRPARDTCEQCHWPTKLVGDRLKVITRHAEDAGSTPLRTV LVVHVGGAQGLGARTRGIHWHVDPGVRIRYLADEKRETIGTVELTGPDGARATFRSKAPAGEARWREMDCVDCHNRPTHV YRSPEDEVDAAVAAGRIDAAALPFARREALKALRAGYPSHEAARAGIAAALGAFYAGPEGGGAPREAVERAASELGDAWA RNVWPSMRIAWGTYPSLLGHEAAPGCFRCHDGDHETEDGRAIRADCDLCHEILAQEEKDPAVLKLLAP
Sequences:
>Translated_468_residues MPSSRSGADWLRHPVSLAGAALATVSGVLVVVLFAASLLGLEGGPYLGILAYLLLPGLLVAGLILVPVGAALERRRLVRL AARGAAEPPLPVMDLNHPRTRRRLLVFLGLTTVNLLLLGIASYKGLEVMDSPAFCGSCHSVMDPEASAHRRSAHARVACV ECHIGPGASWFVKSKLSGAWQVVSVALDLYPRPIPTPVQNLRPARDTCEQCHWPTKLVGDRLKVITRHAEDAGSTPLRTV LVVHVGGAQGLGARTRGIHWHVDPGVRIRYLADEKRETIGTVELTGPDGARATFRSKAPAGEARWREMDCVDCHNRPTHV YRSPEDEVDAAVAAGRIDAAALPFARREALKALRAGYPSHEAARAGIAAALGAFYAGPEGGGAPREAVERAASELGDAWA RNVWPSMRIAWGTYPSLLGHEAAPGCFRCHDGDHETEDGRAIRADCDLCHEILAQEEKDPAVLKLLAP >Mature_467_residues PSSRSGADWLRHPVSLAGAALATVSGVLVVVLFAASLLGLEGGPYLGILAYLLLPGLLVAGLILVPVGAALERRRLVRLA ARGAAEPPLPVMDLNHPRTRRRLLVFLGLTTVNLLLLGIASYKGLEVMDSPAFCGSCHSVMDPEASAHRRSAHARVACVE CHIGPGASWFVKSKLSGAWQVVSVALDLYPRPIPTPVQNLRPARDTCEQCHWPTKLVGDRLKVITRHAEDAGSTPLRTVL VVHVGGAQGLGARTRGIHWHVDPGVRIRYLADEKRETIGTVELTGPDGARATFRSKAPAGEARWREMDCVDCHNRPTHVY RSPEDEVDAAVAAGRIDAAALPFARREALKALRAGYPSHEAARAGIAAALGAFYAGPEGGGAPREAVERAASELGDAWAR NVWPSMRIAWGTYPSLLGHEAAPGCFRCHDGDHETEDGRAIRADCDLCHEILAQEEKDPAVLKLLAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50080; Mature: 49949
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSRSGADWLRHPVSLAGAALATVSGVLVVVLFAASLLGLEGGPYLGILAYLLLPGLLV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AGLILVPVGAALERRRLVRLAARGAAEPPLPVMDLNHPRTRRRLLVFLGLTTVNLLLLGI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ASYKGLEVMDSPAFCGSCHSVMDPEASAHRRSAHARVACVECHIGPGASWFVKSKLSGAW HCCCCCEEECCCCHHCCCHHHCCCCHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHCCHH QVVSVALDLYPRPIPTPVQNLRPARDTCEQCHWPTKLVGDRLKVITRHAEDAGSTPLRTV HHHHHHHHHCCCCCCCCHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEE LVVHVGGAQGLGARTRGIHWHVDPGVRIRYLADEKRETIGTVELTGPDGARATFRSKAPA EEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCHHCCCCEEEEECCCCCCCHHCCCCCC GEARWREMDCVDCHNRPTHVYRSPEDEVDAAVAAGRIDAAALPFARREALKALRAGYPSH CCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCCCH EAARAGIAAALGAFYAGPEGGGAPREAVERAASELGDAWARNVWPSMRIAWGTYPSLLGH HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHCC EAAPGCFRCHDGDHETEDGRAIRADCDLCHEILAQEEKDPAVLKLLAP CCCCCCEECCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCEEEEECC >Mature Secondary Structure PSSRSGADWLRHPVSLAGAALATVSGVLVVVLFAASLLGLEGGPYLGILAYLLLPGLLV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AGLILVPVGAALERRRLVRLAARGAAEPPLPVMDLNHPRTRRRLLVFLGLTTVNLLLLGI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ASYKGLEVMDSPAFCGSCHSVMDPEASAHRRSAHARVACVECHIGPGASWFVKSKLSGAW HCCCCCEEECCCCHHCCCHHHCCCCHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHCCHH QVVSVALDLYPRPIPTPVQNLRPARDTCEQCHWPTKLVGDRLKVITRHAEDAGSTPLRTV HHHHHHHHHCCCCCCCCHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEE LVVHVGGAQGLGARTRGIHWHVDPGVRIRYLADEKRETIGTVELTGPDGARATFRSKAPA EEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCHHCCCCEEEEECCCCCCCHHCCCCCC GEARWREMDCVDCHNRPTHVYRSPEDEVDAAVAAGRIDAAALPFARREALKALRAGYPSH CCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCCCH EAARAGIAAALGAFYAGPEGGGAPREAVERAASELGDAWARNVWPSMRIAWGTYPSLLGH HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHCC EAAPGCFRCHDGDHETEDGRAIRADCDLCHEILAQEEKDPAVLKLLAP CCCCCCEECCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA