| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is glnD [H]
Identifier: 220917353
GI number: 220917353
Start: 2502551
End: 2505343
Strand: Direct
Name: glnD [H]
Synonym: A2cp1_2253
Alternate gene names: 220917353
Gene position: 2502551-2505343 (Clockwise)
Preceding gene: 220917352
Following gene: 220917354
Centisome position: 49.76
GC content: 74.72
Gene sequence:
>2793_bases ATGACGCCCCCCGCGCTCGACGCCCTGATCAACCTCCCCGTGGCCGCGCCCTTCGAGTTCGAGGCGAAGCTCGCCGAGCT GCCGCAGGTGACGGGGGATCCCAAGGCCGCGTTCGCCGAGCTGCGCCGCTACGTCGAGGACGTCCACCGCGCCGGGGCGA GCGGGCACACGGTGGTCCGGCTGCAGAGCGCGGCCATGGACCGGGTGGTGGGCGCGCTGTGGGACCGCGCGCTGGCCGAG GCGGGTCAGGCGCACGCGCCCTCGCCGGTCTCGCTGGTGGCGCTGGGGGGCTACGGCCGGCGCGAGCTGGCGCCGTTCAG CGACGTGGACCTGCTCGTGCTCCACGCGCCGGGGAAGCCGGACGCGTTCGTGAAGACCGCCGCGGAGCGGCTGGTCTACG CGCTCTGGGACCTGCGGCTCGAGGTCGGCTACGCGGTCCGCGACCTGAAGACCTGCGACCAGCTCGCCTCCGAGGACCAC ACCGCGCGCACCGCGCTGCTCGACCTCCGGTGGCTGGGCGGCGATCGCGACCTCTACCGCGAGCTGGAGCGCGAGGAGCT GCACGGGCTCTCCACCGCCAAGGTCGAGAAGTTCCTGCAGGACAAGCTCGACGAGATGCGCGGCCGCCGCGAGCGGTTCG GCGACTCGCTCTACCTGCTCGAGCCGAACGTGAAGGAGTCGGAGGGCGGGCTGCGGGATCTCCAGTCGGCGCTGTGGCTG GCGCGGGTGCGCTTCAAGGTCGCCGGGATCACCGAGCTGCTCTCCCGGGCGCTGCTGCCGGAGCGCGACATCCGCGAGAT GCGCCGCGCGCGCGACTTCCTCTGGCGGGTGCGCAACGAGATGCACTACCTCGCCGGCCGCAAGTGGGACCAGCTCACCT TCGACGTGCAGCCGCAGGTCGCGCAGGCGATGGGGTACCGCGACCGCGAGGGCGCGAGCGGGGTCGAGGAGTTCATGCGC CACTACTACCTGGCCGCGAAGGCGGTGCTGGTGGCGTGCGACGCGATCGTGGACCGGTGCCTGGAGACGCAGACCGCCAC CGGCTGGCGCATGGTGCCGCCGCCGGCCGCCACCATCGGCGCCGAGCGGCCGGTGCCGGTGCTGCAGGGGCAGCCCACCC GCGCCGCGGACCGGTTCCTGCCCGGCGGCGAGCTGAAGGTGTTCCGCGGCCGGCTCACCGTGTCCGACAAGGACGTGCTG CGCCGCTCGCCCGCGGCGCTGGTGCGCCTGTTCGCGGCGGCGGACCGGGAGCAGCTCGACCTGTACCCGTACGCGCGGGA CCTCGCCGCGCAGGTGGCCGAGGAGCTGCCGCCGGAGGGCGCGGCCGACCCGGAGCTGAACCAGGAGCTGCTGGCGTGCT TCACGCGGGCCGGCACGCGCGGCCGCTTCCTCACGCAGATGCACGAGCTGGGCGTGCTGCCCAAGGTGCTGCCGGAGTTC GCGCGGATCACCGCCCGCCGGCAGATCGACGTCTACCACGTGTACACGGTGGACGTTCACACGCTGTTCGCGGTGCGCCG GCTGTTCGCGCTCCGCTGCGGCGACGTGAAGGAGCCGGTGCTGGGCGAGCTCATGCAGGCGCAGGCGCGCCCGCTGGCGC TCTACCTCGGCACCCTCTTCCACGACATCGGCAAGGGCGCGGGCAAGGACCACTCGGTGCGCGGCGCGGAGATCGCCGCC GAGGCCTGCGTGCGCATGGGCGTGGACCCGGACGACGCCGGCGACATCGAGTGGCTGGTGCTGAAGCACCTGCGGATGTC GGCCATCGCGCAGCGGCGCGATCTCTCGGATCCCGATCTCATCCACGCGTTCGCGGAGGAGGTCGGCACCCTAGACCGGC TGGAGAAGCTGTACCTCCTCACCTACGCGGACATGGCCACGGTCGGCCCGCGCACCTGGACCGAGTGGAAGGCGCGGCTG CTGCTCGAGCTGTACGGGAAGACGCGCGAGGTGCTGCAGCGGGGCGAGCGCCGTCCGGAGCCCGGGACCGCGGAGGCGGC CGGCAGGACGCGGGTGGTCGCCGCGCTCGCCGCCAGCCCGCGCCACGGGTCGGAGGCCGAGCAGCGACGCTTCGTCGCGG CCATGCCGGCGCGGTACTTCCTGACCGCCGCGCCCGGGGAGGCGCCGCACCACCTGCGACTGCTCCAGCTCGGGCGCGAC CGGGTGCTCGCCGGAGCGCTGCGCCACCGGCGCGACCTGGGGCTGACCGAGCTGGCGCTCACCGCCCGGGACCGCCCCGG CCTGCTCGCCATCGTGGCGGGCGTGCTGGCGGCCCACCGCATCGACATCCAGCACGCCGAGGTGTTCTCCAGCTCGCCCG ACCCCGCGGCGGCCGGCTGGCTGGCCGGCCGGGCGCTCGACGTGTTCGAGCTGCGGGGCCCCGACGACGGTCCGGTCGAG CCGGCGCGCTGGCGCGCCGCGCGGCGGGATCTGGTCCGCGTGCTCGCGGGCGAGGAGCCGCTCGCCGCCCTGATGACCCG GCGCCTGCGCGCCTCCTCGGTCGCGGCGAAGCCGCTCCCGCGGGTGCCCACCAAGATCGTGATCGACAACCACAGCGCCC GCGCCCACAGCGTGGTGGACGTCTTCACCGCGGATCGCGTGGGCCTGCTGCACACCGTCGCGCGCACGTTCTTCGAGCTG GGCGTGTCGGTGGACCTGGCGCGCATCGCGACCGAGGGCCACCGGGCGGCCGACGCGTTCTACGTCCGCACGTCGGACGG GCGGCCGCTCGAGGGCGAGCAGGCCGGGCGCGTGGTGGCTGCGCTCGAGGCGGCGCTCGCCCGCGCCGATTGA
Upstream 100 bases:
>100_bases GGCAACGATCGCCGCCCCGCGGGCGTTCGCCGCCATCCACGCGCCGGCGCCGTGATCCGCCGCGGGAGCGCGGGGCCGGC GGACGCTATACTCCGCCGCG
Downstream 100 bases:
>100_bases CCGGCGCACTTCACGGTCCGTTCCTCCGTCCCCCGCCGCCCGCGCGCGCGCGACGGCCGCCGACGCACGCCCGGCGGCCG CCCGGGCCGCGCCGCGGGCC
Product: UTP-GlnB uridylyltransferase, GlnD
Products: NA
Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme [H]
Number of amino acids: Translated: 930; Mature: 929
Protein sequence:
>930_residues MTPPALDALINLPVAAPFEFEAKLAELPQVTGDPKAAFAELRRYVEDVHRAGASGHTVVRLQSAAMDRVVGALWDRALAE AGQAHAPSPVSLVALGGYGRRELAPFSDVDLLVLHAPGKPDAFVKTAAERLVYALWDLRLEVGYAVRDLKTCDQLASEDH TARTALLDLRWLGGDRDLYRELEREELHGLSTAKVEKFLQDKLDEMRGRRERFGDSLYLLEPNVKESEGGLRDLQSALWL ARVRFKVAGITELLSRALLPERDIREMRRARDFLWRVRNEMHYLAGRKWDQLTFDVQPQVAQAMGYRDREGASGVEEFMR HYYLAAKAVLVACDAIVDRCLETQTATGWRMVPPPAATIGAERPVPVLQGQPTRAADRFLPGGELKVFRGRLTVSDKDVL RRSPAALVRLFAAADREQLDLYPYARDLAAQVAEELPPEGAADPELNQELLACFTRAGTRGRFLTQMHELGVLPKVLPEF ARITARRQIDVYHVYTVDVHTLFAVRRLFALRCGDVKEPVLGELMQAQARPLALYLGTLFHDIGKGAGKDHSVRGAEIAA EACVRMGVDPDDAGDIEWLVLKHLRMSAIAQRRDLSDPDLIHAFAEEVGTLDRLEKLYLLTYADMATVGPRTWTEWKARL LLELYGKTREVLQRGERRPEPGTAEAAGRTRVVAALAASPRHGSEAEQRRFVAAMPARYFLTAAPGEAPHHLRLLQLGRD RVLAGALRHRRDLGLTELALTARDRPGLLAIVAGVLAAHRIDIQHAEVFSSSPDPAAAGWLAGRALDVFELRGPDDGPVE PARWRAARRDLVRVLAGEEPLAALMTRRLRASSVAAKPLPRVPTKIVIDNHSARAHSVVDVFTADRVGLLHTVARTFFEL GVSVDLARIATEGHRAADAFYVRTSDGRPLEGEQAGRVVAALEAALARAD
Sequences:
>Translated_930_residues MTPPALDALINLPVAAPFEFEAKLAELPQVTGDPKAAFAELRRYVEDVHRAGASGHTVVRLQSAAMDRVVGALWDRALAE AGQAHAPSPVSLVALGGYGRRELAPFSDVDLLVLHAPGKPDAFVKTAAERLVYALWDLRLEVGYAVRDLKTCDQLASEDH TARTALLDLRWLGGDRDLYRELEREELHGLSTAKVEKFLQDKLDEMRGRRERFGDSLYLLEPNVKESEGGLRDLQSALWL ARVRFKVAGITELLSRALLPERDIREMRRARDFLWRVRNEMHYLAGRKWDQLTFDVQPQVAQAMGYRDREGASGVEEFMR HYYLAAKAVLVACDAIVDRCLETQTATGWRMVPPPAATIGAERPVPVLQGQPTRAADRFLPGGELKVFRGRLTVSDKDVL RRSPAALVRLFAAADREQLDLYPYARDLAAQVAEELPPEGAADPELNQELLACFTRAGTRGRFLTQMHELGVLPKVLPEF ARITARRQIDVYHVYTVDVHTLFAVRRLFALRCGDVKEPVLGELMQAQARPLALYLGTLFHDIGKGAGKDHSVRGAEIAA EACVRMGVDPDDAGDIEWLVLKHLRMSAIAQRRDLSDPDLIHAFAEEVGTLDRLEKLYLLTYADMATVGPRTWTEWKARL LLELYGKTREVLQRGERRPEPGTAEAAGRTRVVAALAASPRHGSEAEQRRFVAAMPARYFLTAAPGEAPHHLRLLQLGRD RVLAGALRHRRDLGLTELALTARDRPGLLAIVAGVLAAHRIDIQHAEVFSSSPDPAAAGWLAGRALDVFELRGPDDGPVE PARWRAARRDLVRVLAGEEPLAALMTRRLRASSVAAKPLPRVPTKIVIDNHSARAHSVVDVFTADRVGLLHTVARTFFEL GVSVDLARIATEGHRAADAFYVRTSDGRPLEGEQAGRVVAALEAALARAD >Mature_929_residues TPPALDALINLPVAAPFEFEAKLAELPQVTGDPKAAFAELRRYVEDVHRAGASGHTVVRLQSAAMDRVVGALWDRALAEA GQAHAPSPVSLVALGGYGRRELAPFSDVDLLVLHAPGKPDAFVKTAAERLVYALWDLRLEVGYAVRDLKTCDQLASEDHT ARTALLDLRWLGGDRDLYRELEREELHGLSTAKVEKFLQDKLDEMRGRRERFGDSLYLLEPNVKESEGGLRDLQSALWLA RVRFKVAGITELLSRALLPERDIREMRRARDFLWRVRNEMHYLAGRKWDQLTFDVQPQVAQAMGYRDREGASGVEEFMRH YYLAAKAVLVACDAIVDRCLETQTATGWRMVPPPAATIGAERPVPVLQGQPTRAADRFLPGGELKVFRGRLTVSDKDVLR RSPAALVRLFAAADREQLDLYPYARDLAAQVAEELPPEGAADPELNQELLACFTRAGTRGRFLTQMHELGVLPKVLPEFA RITARRQIDVYHVYTVDVHTLFAVRRLFALRCGDVKEPVLGELMQAQARPLALYLGTLFHDIGKGAGKDHSVRGAEIAAE ACVRMGVDPDDAGDIEWLVLKHLRMSAIAQRRDLSDPDLIHAFAEEVGTLDRLEKLYLLTYADMATVGPRTWTEWKARLL LELYGKTREVLQRGERRPEPGTAEAAGRTRVVAALAASPRHGSEAEQRRFVAAMPARYFLTAAPGEAPHHLRLLQLGRDR VLAGALRHRRDLGLTELALTARDRPGLLAIVAGVLAAHRIDIQHAEVFSSSPDPAAAGWLAGRALDVFELRGPDDGPVEP ARWRAARRDLVRVLAGEEPLAALMTRRLRASSVAAKPLPRVPTKIVIDNHSARAHSVVDVFTADRVGLLHTVARTFFELG VSVDLARIATEGHRAADAFYVRTSDGRPLEGEQAGRVVAALEAALARAD
Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein [H]
COG id: COG2844
COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glnD family [H]
Homologues:
Organism=Escherichia coli, GI1786363, Length=913, Percent_Identity=30.6681270536692, Blast_Score=344, Evalue=1e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR010043 - InterPro: IPR003607 - InterPro: IPR002934 - InterPro: IPR013546 [H]
Pfam domain/function: PF01842 ACT; PF08335 GlnD_UR_UTase; PF01909 NTP_transf_2 [H]
EC number: =2.7.7.59 [H]
Molecular weight: Translated: 102844; Mature: 102713
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPALDALINLPVAAPFEFEAKLAELPQVTGDPKAAFAELRRYVEDVHRAGASGHTVVR CCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEE LQSAAMDRVVGALWDRALAEAGQAHAPSPVSLVALGGYGRRELAPFSDVDLLVLHAPGKP EHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCC DAFVKTAAERLVYALWDLRLEVGYAVRDLKTCDQLASEDHTARTALLDLRWLGGDRDLYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHH ELEREELHGLSTAKVEKFLQDKLDEMRGRRERFGDSLYLLEPNVKESEGGLRDLQSALWL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHH ARVRFKVAGITELLSRALLPERDIREMRRARDFLWRVRNEMHYLAGRKWDQLTFDVQPQV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHH AQAMGYRDREGASGVEEFMRHYYLAAKAVLVACDAIVDRCLETQTATGWRMVPPPAATIG HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHCC AERPVPVLQGQPTRAADRFLPGGELKVFRGRLTVSDKDVLRRSPAALVRLFAAADREQLD CCCCCCCCCCCCCHHHHHCCCCCCEEEEEEEEEECHHHHHHCCHHHHHHHHHHCCCCCCC LYPYARDLAAQVAEELPPEGAADPELNQELLACFTRAGTRGRFLTQMHELGVLPKVLPEF CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHH ARITARRQIDVYHVYTVDVHTLFAVRRLFALRCGDVKEPVLGELMQAQARPLALYLGTLF HHHHHHCEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHH HDIGKGAGKDHSVRGAEIAAEACVRMGVDPDDAGDIEWLVLKHLRMSAIAQRRDLSDPDL HHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH IHAFAEEVGTLDRLEKLYLLTYADMATVGPRTWTEWKARLLLELYGKTREVLQRGERRPE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC PGTAEAAGRTRVVAALAASPRHGSEAEQRRFVAAMPARYFLTAAPGEAPHHLRLLQLGRD CCCCHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHEEEECCCCCCHHHHHHHHCHH RVLAGALRHRRDLGLTELALTARDRPGLLAIVAGVLAAHRIDIQHAEVFSSSPDPAAAGW HHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHH LAGRALDVFELRGPDDGPVEPARWRAARRDLVRVLAGEEPLAALMTRRLRASSVAAKPLP HHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC RVPTKIVIDNHSARAHSVVDVFTADRVGLLHTVARTFFELGVSVDLARIATEGHRAADAF CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEE YVRTSDGRPLEGEQAGRVVAALEAALARAD EEECCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TPPALDALINLPVAAPFEFEAKLAELPQVTGDPKAAFAELRRYVEDVHRAGASGHTVVR CCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEE LQSAAMDRVVGALWDRALAEAGQAHAPSPVSLVALGGYGRRELAPFSDVDLLVLHAPGKP EHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCC DAFVKTAAERLVYALWDLRLEVGYAVRDLKTCDQLASEDHTARTALLDLRWLGGDRDLYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHH ELEREELHGLSTAKVEKFLQDKLDEMRGRRERFGDSLYLLEPNVKESEGGLRDLQSALWL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHH ARVRFKVAGITELLSRALLPERDIREMRRARDFLWRVRNEMHYLAGRKWDQLTFDVQPQV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHH AQAMGYRDREGASGVEEFMRHYYLAAKAVLVACDAIVDRCLETQTATGWRMVPPPAATIG HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHCC AERPVPVLQGQPTRAADRFLPGGELKVFRGRLTVSDKDVLRRSPAALVRLFAAADREQLD CCCCCCCCCCCCCHHHHHCCCCCCEEEEEEEEEECHHHHHHCCHHHHHHHHHHCCCCCCC LYPYARDLAAQVAEELPPEGAADPELNQELLACFTRAGTRGRFLTQMHELGVLPKVLPEF CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHH ARITARRQIDVYHVYTVDVHTLFAVRRLFALRCGDVKEPVLGELMQAQARPLALYLGTLF HHHHHHCEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHH HDIGKGAGKDHSVRGAEIAAEACVRMGVDPDDAGDIEWLVLKHLRMSAIAQRRDLSDPDL HHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH IHAFAEEVGTLDRLEKLYLLTYADMATVGPRTWTEWKARLLLELYGKTREVLQRGERRPE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC PGTAEAAGRTRVVAALAASPRHGSEAEQRRFVAAMPARYFLTAAPGEAPHHLRLLQLGRD CCCCHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHEEEECCCCCCHHHHHHHHCHH RVLAGALRHRRDLGLTELALTARDRPGLLAIVAGVLAAHRIDIQHAEVFSSSPDPAAAGW HHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHH LAGRALDVFELRGPDDGPVEPARWRAARRDLVRVLAGEEPLAALMTRRLRASSVAAKPLP HHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC RVPTKIVIDNHSARAHSVVDVFTADRVGLLHTVARTFFELGVSVDLARIATEGHRAADAF CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEE YVRTSDGRPLEGEQAGRVVAALEAALARAD EEECCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA