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The map label for this gene is elbB [H]

Identifier: 220917350

GI number: 220917350

Start: 2497896

End: 2498561

Strand: Reverse

Name: elbB [H]

Synonym: A2cp1_2250

Alternate gene names: 220917350

Gene position: 2498561-2497896 (Counterclockwise)

Preceding gene: 220917365

Following gene: 220917349

Centisome position: 49.68

GC content: 73.57

Gene sequence:

>666_bases
ATGGCGAGCCAGAAGCGCGTGGGCGTCGTCCTGTCCGGCTGCGGGTTCCTGGACGGCGCCGAGATCCACGAGGCGGTGTG
CACGCTGCTGTCCCTCGACCGCCGCGGCGTGAAGCTCGTCGCGACCGCGCCGGACGTCGAGCAGCTGCACGTCGTCGATC
ACGTGAAGGGGGCGCCGGCCGACGGCGAGCGGCGCCGCGTGCTGGTGGAGGCGGCCCGCATCGTGCGCGGGCAGATCACG
CCGCTCTCCGCGGTGTCGGGGCGGGACCTCGACGCGCTGGTGTTCCCGGGCGGCTTCGGCGCGGCCAAGAACCTCTGCAG
CTTCGCGGTGGAGGGCCGGGCCATGCGCGTCCTCCCGGAGGTGGAGCGGATCGTGCGCGAGGTGCGCGGCGCCGGCAGGC
CGATGGGCTTCATCTGCATCGCCCCGGTGATCGCGGCGCGCCTGCTCGGGCCCGAGGGGGTCAAGGTCACGATCGGGAAC
GACCGCGACACCGCCGCCGCGATCGAGTCCTGGGGCGCGCGCCACGTGGACTGCAAGGTGGAGGACGCGGTGGTGGACGA
GCGGCTGAAGATCGCCAGCACGCCCGCCTACATGCTCGGCCCCTGGATCGCCCCGGTGGCGACCGGGATCGACAAGCTGG
TCTCGGCGGTGCTGGAGATGGCCTGA

Upstream 100 bases:

>100_bases
GCATCCCATGCGCGGGGCCATTCCCGACCGGCCCGGGACACTGCCCGGGTGCGCGCGGCGGCGGTATCCTGGCCCGTCCC
ACACTCCTCGGAGGCCTCCG

Downstream 100 bases:

>100_bases
CAGCCCCCTCCCGGCGGGAGGAAAGGCCCTGAATTGATGCACGTCAACCGGGGATGCCGGTCAGGGCCCCTCTGCGACAA
TTCTTCCGGACCCCCCTGAA

Product: isoprenoid biosynthesis protein with amidotransferase-like domain

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MASQKRVGVVLSGCGFLDGAEIHEAVCTLLSLDRRGVKLVATAPDVEQLHVVDHVKGAPADGERRRVLVEAARIVRGQIT
PLSAVSGRDLDALVFPGGFGAAKNLCSFAVEGRAMRVLPEVERIVREVRGAGRPMGFICIAPVIAARLLGPEGVKVTIGN
DRDTAAAIESWGARHVDCKVEDAVVDERLKIASTPAYMLGPWIAPVATGIDKLVSAVLEMA

Sequences:

>Translated_221_residues
MASQKRVGVVLSGCGFLDGAEIHEAVCTLLSLDRRGVKLVATAPDVEQLHVVDHVKGAPADGERRRVLVEAARIVRGQIT
PLSAVSGRDLDALVFPGGFGAAKNLCSFAVEGRAMRVLPEVERIVREVRGAGRPMGFICIAPVIAARLLGPEGVKVTIGN
DRDTAAAIESWGARHVDCKVEDAVVDERLKIASTPAYMLGPWIAPVATGIDKLVSAVLEMA
>Mature_220_residues
ASQKRVGVVLSGCGFLDGAEIHEAVCTLLSLDRRGVKLVATAPDVEQLHVVDHVKGAPADGERRRVLVEAARIVRGQITP
LSAVSGRDLDALVFPGGFGAAKNLCSFAVEGRAMRVLPEVERIVREVRGAGRPMGFICIAPVIAARLLGPEGVKVTIGND
RDTAAAIESWGARHVDCKVEDAVVDERLKIASTPAYMLGPWIAPVATGIDKLVSAVLEMA

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=224, Percent_Identity=48.2142857142857, Blast_Score=209, Evalue=1e-54,
Organism=Homo sapiens, GI296531408, Length=224, Percent_Identity=41.9642857142857, Blast_Score=163, Evalue=1e-40,
Organism=Escherichia coli, GI87082228, Length=217, Percent_Identity=51.6129032258064, Blast_Score=213, Evalue=6e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 23348; Mature: 23217

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASQKRVGVVLSGCGFLDGAEIHEAVCTLLSLDRRGVKLVATAPDVEQLHVVDHVKGAPA
CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCC
DGERRRVLVEAARIVRGQITPLSAVSGRDLDALVFPGGFGAAKNLCSFAVEGRAMRVLPE
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHH
VERIVREVRGAGRPMGFICIAPVIAARLLGPEGVKVTIGNDRDTAAAIESWGARHVDCKV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCEECCCCH
EDAVVDERLKIASTPAYMLGPWIAPVATGIDKLVSAVLEMA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASQKRVGVVLSGCGFLDGAEIHEAVCTLLSLDRRGVKLVATAPDVEQLHVVDHVKGAPA
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCC
DGERRRVLVEAARIVRGQITPLSAVSGRDLDALVFPGGFGAAKNLCSFAVEGRAMRVLPE
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHH
VERIVREVRGAGRPMGFICIAPVIAARLLGPEGVKVTIGNDRDTAAAIESWGARHVDCKV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCEECCCCH
EDAVVDERLKIASTPAYMLGPWIAPVATGIDKLVSAVLEMA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]