| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is map [C]
Identifier: 220917289
GI number: 220917289
Start: 2427769
End: 2428566
Strand: Reverse
Name: map [C]
Synonym: A2cp1_2188
Alternate gene names: 220917289
Gene position: 2428566-2427769 (Counterclockwise)
Preceding gene: 220917293
Following gene: 220917288
Centisome position: 48.29
GC content: 74.44
Gene sequence:
>798_bases ATGGCAATCCCATTGCTGGGCGAGCAGGCGATCGAGCGGACGCGGCATGCGGGCAGGGCCGCGGCGGCGACGCTGGCGCA CGTGGCCGAGCGGCTCGCGGCGGGCGTCTCCACGGCCGACATCGACGCCTGGGTGCGCGAGGACACCGCGCGGCGGGGCG GCCATCCGAGCCAGCTCGGCTTCCACGGCTTTCCTGCGGCGGTCTGCACGAGCCGGAACGACGTCGTCTGCCACGGCGTC CCGCGCGCCGAGGAGCGGCTGCGCCCCGGCGACATCGTGAACGTGGACGTGACCACGCGCCTCGACGGCTTCCACGGGGA CACCTCGGCGACGTTCTGCATCGGCGAGGTCTCCGCGGAGGCGCGGCACGTCGTCGAGGTCGCCCGCCGCTGCCGCGAGG CCGGGGTGGCGGTCGTGCGCCACGGCGTCCGGCTCGGCGACGTGGGCGCGGCCATCGAGGAGGTCGCGCGCGCCGGCGGC TGCAGCGTGGTGCGCGAGTACGGCGGTCACGGCATCGGCAAGGCGATGCACGGCCCGCCGCTCGTGATGCACGTCGGCCC GAGGGGACAGGGCGTGAAGCTGAAGGCCGGGATGGCCATCACCGTCGAGCCGATGGTGAACCTCGGCCGACCGGAGGTGA AGCTGCTCGCCGACGGGTGGACGGTGGTCACGGCGGACGGGAGCCTCTCGGCGCAGTTCGAGCACACGGTGGTAGTGACG CGCGACGGGTGCGAGGTGATGACCGGATGCGCCGGACGTGCAGCTCTGGCGCCCGCCGCGTCCGGGCTGAGCGCTTGA
Upstream 100 bases:
>100_bases GTGCGTGTCAGGTCCCGGAGGACCACGGCCCTCGGCGGAAGCACGGGCCGATGCCGAGACGGCATTGGACCCCTCCGGCG GCTCGCGGGACCTTGCCGGC
Downstream 100 bases:
>100_bases CCGAGCGTCATCCCGCCGCCGCCGTTCGGGCCACCCCTCACGACCGCGCCCTCGCCTCGTTCGCGGCACCGCGGCCCGCG CGCACCGCGCGAGACTGGCG
Product: methionine aminopeptidase, type I
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MAIPLLGEQAIERTRHAGRAAAATLAHVAERLAAGVSTADIDAWVREDTARRGGHPSQLGFHGFPAAVCTSRNDVVCHGV PRAEERLRPGDIVNVDVTTRLDGFHGDTSATFCIGEVSAEARHVVEVARRCREAGVAVVRHGVRLGDVGAAIEEVARAGG CSVVREYGGHGIGKAMHGPPLVMHVGPRGQGVKLKAGMAITVEPMVNLGRPEVKLLADGWTVVTADGSLSAQFEHTVVVT RDGCEVMTGCAGRAALAPAASGLSA
Sequences:
>Translated_265_residues MAIPLLGEQAIERTRHAGRAAAATLAHVAERLAAGVSTADIDAWVREDTARRGGHPSQLGFHGFPAAVCTSRNDVVCHGV PRAEERLRPGDIVNVDVTTRLDGFHGDTSATFCIGEVSAEARHVVEVARRCREAGVAVVRHGVRLGDVGAAIEEVARAGG CSVVREYGGHGIGKAMHGPPLVMHVGPRGQGVKLKAGMAITVEPMVNLGRPEVKLLADGWTVVTADGSLSAQFEHTVVVT RDGCEVMTGCAGRAALAPAASGLSA >Mature_264_residues AIPLLGEQAIERTRHAGRAAAATLAHVAERLAAGVSTADIDAWVREDTARRGGHPSQLGFHGFPAAVCTSRNDVVCHGVP RAEERLRPGDIVNVDVTTRLDGFHGDTSATFCIGEVSAEARHVVEVARRCREAGVAVVRHGVRLGDVGAAIEEVARAGGC SVVREYGGHGIGKAMHGPPLVMHVGPRGQGVKLKAGMAITVEPMVNLGRPEVKLLADGWTVVTADGSLSAQFEHTVVVTR DGCEVMTGCAGRAALAPAASGLSA
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI40385867, Length=253, Percent_Identity=39.5256916996047, Blast_Score=200, Evalue=1e-51, Organism=Homo sapiens, GI164420681, Length=246, Percent_Identity=42.2764227642276, Blast_Score=191, Evalue=5e-49, Organism=Escherichia coli, GI1786364, Length=249, Percent_Identity=44.9799196787149, Blast_Score=225, Evalue=2e-60, Organism=Caenorhabditis elegans, GI71996291, Length=247, Percent_Identity=40.4858299595142, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6323273, Length=248, Percent_Identity=39.5161290322581, Blast_Score=196, Evalue=2e-51, Organism=Drosophila melanogaster, GI24583427, Length=238, Percent_Identity=37.8151260504202, Blast_Score=188, Evalue=3e-48, Organism=Drosophila melanogaster, GI21355531, Length=246, Percent_Identity=38.2113821138211, Blast_Score=183, Evalue=1e-46,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 27462; Mature: 27330
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: PS00680 MAP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIPLLGEQAIERTRHAGRAAAATLAHVAERLAAGVSTADIDAWVREDTARRGGHPSQLG CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC FHGFPAAVCTSRNDVVCHGVPRAEERLRPGDIVNVDVTTRLDGFHGDTSATFCIGEVSAE CCCCCHHHCCCCCCEEEECCCCHHHHCCCCCEEEEEEEEEECCCCCCCCCEEEEECCCHH ARHVVEVARRCREAGVAVVRHGVRLGDVGAAIEEVARAGGCSVVREYGGHGIGKAMHGPP HHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCE LVMHVGPRGQGVKLKAGMAITVEPMVNLGRPEVKLLADGWTVVTADGSLSAQFEHTVVVT EEEEECCCCCCEEEECCEEEEECHHHCCCCCCEEEEECCEEEEEECCCCEEEEEEEEEEE RDGCEVMTGCAGRAALAPAASGLSA ECCCHHHHCCCCCHHHCCCCCCCCC >Mature Secondary Structure AIPLLGEQAIERTRHAGRAAAATLAHVAERLAAGVSTADIDAWVREDTARRGGHPSQLG CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC FHGFPAAVCTSRNDVVCHGVPRAEERLRPGDIVNVDVTTRLDGFHGDTSATFCIGEVSAE CCCCCHHHCCCCCCEEEECCCCHHHHCCCCCEEEEEEEEEECCCCCCCCCEEEEECCCHH ARHVVEVARRCREAGVAVVRHGVRLGDVGAAIEEVARAGGCSVVREYGGHGIGKAMHGPP HHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCE LVMHVGPRGQGVKLKAGMAITVEPMVNLGRPEVKLLADGWTVVTADGSLSAQFEHTVVVT EEEEECCCCCCEEEECCEEEEECHHHCCCCCCEEEEECCEEEEEECCCCEEEEEEEEEEE RDGCEVMTGCAGRAALAPAASGLSA ECCCHHHHCCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]