Click here to switch to the map view.

The map label for this gene is 220917246

Identifier: 220917246

GI number: 220917246

Start: 2386425

End: 2386643

Strand: Reverse

Name: 220917246

Synonym: A2cp1_2144

Alternate gene names: NA

Gene position: 2386643-2386425 (Counterclockwise)

Preceding gene: 220917247

Following gene: 220917245

Centisome position: 47.45

GC content: 76.26

Gene sequence:

>219_bases
ATGACGCCGGAGCCCGGGACGAAGGGCCCGCTGCTGCCGATGGCCGCCGTCGCCCGCCGCCTCGGCGTGTCGAAGAAGAC
CGTGGCGCGCCGGATCCGCGCCGGCGAGCTGCTCGGCGGGCAGCGCGTCGGGGGGAAGGTCTGCCTACCCGAGGCCGAGG
TGCTCGCGTACCTGCGCCGCGAGCGGGAGCGATCGCTGTCGCTGGTGAGGGCCGCGTAG

Upstream 100 bases:

>100_bases
TCACCGCAGAGGCCCTGCGGCGCGCCGCCGAGGCGGAGACTGCCCGGCCGGACAAGTCGGCGGTGCTGCGCGAGATCCTC
GACGGCTGGATGGGGCGCCG

Downstream 100 bases:

>100_bases
GAAGCGGGGGCGCGCCGCCTGCCAGCGGCCGCCCCCGTGATCGACCGGCGTGGGAGGGCCGAGCCGATGCGGAAGACGGT
AGCATCACGATCGGACGCCC

Product: excisionase family DNA binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MTPEPGTKGPLLPMAAVARRLGVSKKTVARRIRAGELLGGQRVGGKVCLPEAEVLAYLRRERERSLSLVRAA

Sequences:

>Translated_72_residues
MTPEPGTKGPLLPMAAVARRLGVSKKTVARRIRAGELLGGQRVGGKVCLPEAEVLAYLRRERERSLSLVRAA
>Mature_71_residues
TPEPGTKGPLLPMAAVARRLGVSKKTVARRIRAGELLGGQRVGGKVCLPEAEVLAYLRRERERSLSLVRAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7765; Mature: 7634

Theoretical pI: Translated: 11.92; Mature: 11.92

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPEPGTKGPLLPMAAVARRLGVSKKTVARRIRAGELLGGQRVGGKVCLPEAEVLAYLRR
CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHH
ERERSLSLVRAA
HHHHHHHHHHCC
>Mature Secondary Structure 
TPEPGTKGPLLPMAAVARRLGVSKKTVARRIRAGELLGGQRVGGKVCLPEAEVLAYLRR
CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHH
ERERSLSLVRAA
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA