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The map label for this gene is ydaM [H]

Identifier: 220917221

GI number: 220917221

Start: 2367371

End: 2368579

Strand: Direct

Name: ydaM [H]

Synonym: A2cp1_2119

Alternate gene names: 220917221

Gene position: 2367371-2368579 (Clockwise)

Preceding gene: 220917220

Following gene: 220917222

Centisome position: 47.07

GC content: 75.27

Gene sequence:

>1209_bases
ATGGAAGCGATCTTCTGGCTCGCGCTCGCCCTCGTCGCGTTCAGCTACGTCGGGTACCCGCTCGTGCTCGCCGTCTGGGA
CGGGGCGCGCGAGGCCCTCGCCGCCGTCCGCTTCGTGTCCGGCGGCGACGACCGCCGGGGGCGCGCCGCCGAGGGCTGGC
CCTCGGTGACGCTGCTGTTCTCGGCCTTCGACGAGGAGGCCTGGATCCGGCGCAAGATCGAGAACTGCCTCGCCCTCGAC
TACCCGCCGGACCGCCTCGAGATCGTGGTCGGCTGCGACGGCTGCACCGACCGCACCGCCCAGATCGCGCGCGAGGTGGG
CGGCGCGCGGGTGAAGGTGCACGCGCTCACGCCCCGCGCCGGGAAGGCGAGCGTCCTCTCGCGCCTCGTGCCGCAGGCGC
GCGGCGACCTGGTGGTGCTCACCGACGCGAACGTAATGCTGGAGCGGGGCGCGCTGCGCGCGCTGGCGCGGCGCTTCCGC
GAGCCGGGCGTGGGCGCGGTGGTGGGGCGGCTGCGGCTCTTCAACCCGACCCGCCGCGAGTTCGAGGAGAGCCTGTACTG
GAAGTACGAGACCGCCATCAAGTTCTACGAGGGCAAGCACGGCTGCGTGCTGGGCGCGAACGGCGGCATCTACGCCATCC
GCCGCATCCTGTTCTCGCCGCTCGCGCCCGACACCATCGTGGACGACTTCGTCATCCCGGTGCGGATCGCGGCCCGTGGG
TGGGAGGTGCCGTTCGAGCCGGAGGCGGTCGCGTTCGAGGAGACCACCGAGGACGCCGGGCACGAGTTCGGGCGGCGCGC
GCGCATCGGCGCGGGCAACTGGCAGGCGCTGGCGCGCGTGCCGGAGCTGCTCGACCCGCGCACCGGCTTCCTGTGCTTCG
CGTTCGTCTCGCACAAGCTGCTGCGGTGGTCCGCGCCGTTCCTGCTCGCCGCGGCGGCGGTGGCGAACGGCCTGCTCGCC
GCCGCGCCCGGCGCGTGGGGCTACCGGGCGCTGCTGCTCGCCCAGGCCGCGTTCTACGGGCTCGCGCTGGCGGGCCGGCA
CGGCGCGGCCGGCCTGCGGGGGCCGGTGCGCCGGCTCGCCTCGCTGGCGCACTACTTCGTCGCCATGAACGCCGCGCTGG
CGGTGGGGCTGTGGCGGTTCCTGCGCCGCAGCCAGCGCGCCGCCTGGCAGCGCACCGAGCGCGCCGGCCCGAGCATCCCG
GCCGCCTGA

Upstream 100 bases:

>100_bases
CCGCCCGGCACCGTCCCCGGAGCCGGTGGAGTTCGGCGGGGGCCACTAGCCCCGAGAGGCGGCCGATGGCTGGCGCGCGG
GTTGCTCGCCCGCTGCCGCC

Downstream 100 bases:

>100_bases
CGGCCGGGCGCGGTCGGGTCGTCCTCTGCTCGGGCTCGAGGGGCGCTCGGCGAGTCGTCGGCGGTCCGGCTCGCCCCAAG
GCCATCCCGCCTCGACGCGC

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MEAIFWLALALVAFSYVGYPLVLAVWDGAREALAAVRFVSGGDDRRGRAAEGWPSVTLLFSAFDEEAWIRRKIENCLALD
YPPDRLEIVVGCDGCTDRTAQIAREVGGARVKVHALTPRAGKASVLSRLVPQARGDLVVLTDANVMLERGALRALARRFR
EPGVGAVVGRLRLFNPTRREFEESLYWKYETAIKFYEGKHGCVLGANGGIYAIRRILFSPLAPDTIVDDFVIPVRIAARG
WEVPFEPEAVAFEETTEDAGHEFGRRARIGAGNWQALARVPELLDPRTGFLCFAFVSHKLLRWSAPFLLAAAAVANGLLA
AAPGAWGYRALLLAQAAFYGLALAGRHGAAGLRGPVRRLASLAHYFVAMNAALAVGLWRFLRRSQRAAWQRTERAGPSIP
AA

Sequences:

>Translated_402_residues
MEAIFWLALALVAFSYVGYPLVLAVWDGAREALAAVRFVSGGDDRRGRAAEGWPSVTLLFSAFDEEAWIRRKIENCLALD
YPPDRLEIVVGCDGCTDRTAQIAREVGGARVKVHALTPRAGKASVLSRLVPQARGDLVVLTDANVMLERGALRALARRFR
EPGVGAVVGRLRLFNPTRREFEESLYWKYETAIKFYEGKHGCVLGANGGIYAIRRILFSPLAPDTIVDDFVIPVRIAARG
WEVPFEPEAVAFEETTEDAGHEFGRRARIGAGNWQALARVPELLDPRTGFLCFAFVSHKLLRWSAPFLLAAAAVANGLLA
AAPGAWGYRALLLAQAAFYGLALAGRHGAAGLRGPVRRLASLAHYFVAMNAALAVGLWRFLRRSQRAAWQRTERAGPSIP
AA
>Mature_402_residues
MEAIFWLALALVAFSYVGYPLVLAVWDGAREALAAVRFVSGGDDRRGRAAEGWPSVTLLFSAFDEEAWIRRKIENCLALD
YPPDRLEIVVGCDGCTDRTAQIAREVGGARVKVHALTPRAGKASVLSRLVPQARGDLVVLTDANVMLERGALRALARRFR
EPGVGAVVGRLRLFNPTRREFEESLYWKYETAIKFYEGKHGCVLGANGGIYAIRRILFSPLAPDTIVDDFVIPVRIAARG
WEVPFEPEAVAFEETTEDAGHEFGRRARIGAGNWQALARVPELLDPRTGFLCFAFVSHKLLRWSAPFLLAAAAVANGLLA
AAPGAWGYRALLLAQAAFYGLALAGRHGAAGLRGPVRRLASLAHYFVAMNAALAVGLWRFLRRSQRAAWQRTERAGPSIP
AA

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=227, Percent_Identity=25.5506607929515, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 43948; Mature: 43948

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAIFWLALALVAFSYVGYPLVLAVWDGAREALAAVRFVSGGDDRRGRAAEGWPSVTLLF
CHHHHHHHHHHHHHHHHCHHEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
SAFDEEAWIRRKIENCLALDYPPDRLEIVVGCDGCTDRTAQIAREVGGARVKVHALTPRA
HHHCHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCC
GKASVLSRLVPQARGDLVVLTDANVMLERGALRALARRFREPGVGAVVGRLRLFNPTRRE
CHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHH
FEESLYWKYETAIKFYEGKHGCVLGANGGIYAIRRILFSPLAPDTIVDDFVIPVRIAARG
HHHHHHEEHHHHEEEECCCCCEEEECCCHHHHHHHHHHCCCCCCHHHHCCCEEEEEEECC
WEVPFEPEAVAFEETTEDAGHEFGRRARIGAGNWQALARVPELLDPRTGFLCFAFVSHKL
CCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
LRWSAPFLLAAAAVANGLLAAAPGAWGYRALLLAQAAFYGLALAGRHGAAGLRGPVRRLA
HHHCCHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
SLAHYFVAMNAALAVGLWRFLRRSQRAAWQRTERAGPSIPAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MEAIFWLALALVAFSYVGYPLVLAVWDGAREALAAVRFVSGGDDRRGRAAEGWPSVTLLF
CHHHHHHHHHHHHHHHHCHHEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
SAFDEEAWIRRKIENCLALDYPPDRLEIVVGCDGCTDRTAQIAREVGGARVKVHALTPRA
HHHCHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCC
GKASVLSRLVPQARGDLVVLTDANVMLERGALRALARRFREPGVGAVVGRLRLFNPTRRE
CHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHH
FEESLYWKYETAIKFYEGKHGCVLGANGGIYAIRRILFSPLAPDTIVDDFVIPVRIAARG
HHHHHHEEHHHHEEEECCCCCEEEECCCHHHHHHHHHHCCCCCCHHHHCCCEEEEEEECC
WEVPFEPEAVAFEETTEDAGHEFGRRARIGAGNWQALARVPELLDPRTGFLCFAFVSHKL
CCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
LRWSAPFLLAAAAVANGLLAAAPGAWGYRALLLAQAAFYGLALAGRHGAAGLRGPVRRLA
HHHCCHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
SLAHYFVAMNAALAVGLWRFLRRSQRAAWQRTERAGPSIPAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]