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The map label for this gene is yrbE [C]

Identifier: 220917185

GI number: 220917185

Start: 2323617

End: 2324372

Strand: Direct

Name: yrbE [C]

Synonym: A2cp1_2082

Alternate gene names: 220917185

Gene position: 2323617-2324372 (Clockwise)

Preceding gene: 220917183

Following gene: 220917186

Centisome position: 46.2

GC content: 70.37

Gene sequence:

>756_bases
ATGCTCTCCCGCCTCAGGGACGCCTTCGAGGACTTCGGCCGGATGATCCTGTTCGCCGGCGAGATCGTCGCCTGGGCGTT
CCGGCCGCCGTTCCGGCCCGACCAGATCCTGGCGCAGATGGCCTTCATCGGGGCCGGCTCCGCCTTCATCGTGGGGGTGA
CCGGCACGTTCGCCGGGATGGTGTTCGGCCTCCAGATGAACTACGCGCTCCGCCAGTTCGCCGCCGAGGGCTACACCGGC
GGCTCGACGGCGTTCGCGCTGGCGCGGGAGCTCTCGCCGGTGTTCACCGCGCTCATGGTGACGGGCCGCGCCGGCAGCGC
CATCACCACCGAGCTCGGCACCATGCGCGTCACCGAGCAGATCGACGCGATGGAGACCATGGCGGTCTCGCCCATCCAGT
ACCTGGTGGTCCCGCGGGTGGTCGCGTCCATCCTGATGTTCCCGGTGCTGACCATGCTGTTCAACGCGCTCGGGTACGGC
GGCGCGTACGTGATGGGCGTGTTCGTCTCCGGGATCCCGGAGGGCCCGTTCATCCAGCACACCCGGGAGTTCCTGGGGCC
GAACGACATCTTCCACGGGCTCGGGAAGGCGGTGCTGTTCGGCTACATCGTGGCGGTGATCACCACCTGGCGCGGCTACG
CCGCGAGCGGCGGGGCGCGCGGGGTGGGAGAGGGGACCACGCGCGCGGTGGTGGCCAGCTCGGTCGCGATCCTGGTCGCC
GACTACGCCGGGACCGTCCTGAGCGTGGGGACCTGA

Upstream 100 bases:

>100_bases
TAGCCGCGACCCCGCGCGGCGCCTCACGAATCGGCGCCGCACGCGACCGGGCTGCGCGAAAGCGGGCACGGCGGTCGCTG
CCGTGCGAGAATGCGCCCGC

Downstream 100 bases:

>100_bases
GCGTGATCGAGGTCCGCGATCTCTGGAAGTCCTTCGGGACGAACCAGGTGCTGAAGGGCATCACGCTCGACGTGCCGAAG
GGCAACACGTACGTGGTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MLSRLRDAFEDFGRMILFAGEIVAWAFRPPFRPDQILAQMAFIGAGSAFIVGVTGTFAGMVFGLQMNYALRQFAAEGYTG
GSTAFALARELSPVFTALMVTGRAGSAITTELGTMRVTEQIDAMETMAVSPIQYLVVPRVVASILMFPVLTMLFNALGYG
GAYVMGVFVSGIPEGPFIQHTREFLGPNDIFHGLGKAVLFGYIVAVITTWRGYAASGGARGVGEGTTRAVVASSVAILVA
DYAGTVLSVGT

Sequences:

>Translated_251_residues
MLSRLRDAFEDFGRMILFAGEIVAWAFRPPFRPDQILAQMAFIGAGSAFIVGVTGTFAGMVFGLQMNYALRQFAAEGYTG
GSTAFALARELSPVFTALMVTGRAGSAITTELGTMRVTEQIDAMETMAVSPIQYLVVPRVVASILMFPVLTMLFNALGYG
GAYVMGVFVSGIPEGPFIQHTREFLGPNDIFHGLGKAVLFGYIVAVITTWRGYAASGGARGVGEGTTRAVVASSVAILVA
DYAGTVLSVGT
>Mature_251_residues
MLSRLRDAFEDFGRMILFAGEIVAWAFRPPFRPDQILAQMAFIGAGSAFIVGVTGTFAGMVFGLQMNYALRQFAAEGYTG
GSTAFALARELSPVFTALMVTGRAGSAITTELGTMRVTEQIDAMETMAVSPIQYLVVPRVVASILMFPVLTMLFNALGYG
GAYVMGVFVSGIPEGPFIQHTREFLGPNDIFHGLGKAVLFGYIVAVITTWRGYAASGGARGVGEGTTRAVVASSVAILVA
DYAGTVLSVGT

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=229, Percent_Identity=39.3013100436681, Blast_Score=144, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 26523; Mature: 26523

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRLRDAFEDFGRMILFAGEIVAWAFRPPFRPDQILAQMAFIGAGSAFIVGVTGTFAGM
CHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHHH
VFGLQMNYALRQFAAEGYTGGSTAFALARELSPVFTALMVTGRAGSAITTELGTMRVTEQ
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
IDAMETMAVSPIQYLVVPRVVASILMFPVLTMLFNALGYGGAYVMGVFVSGIPEGPFIQH
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHH
TREFLGPNDIFHGLGKAVLFGYIVAVITTWRGYAASGGARGVGEGTTRAVVASSVAILVA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
DYAGTVLSVGT
HHCCCEEECCC
>Mature Secondary Structure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HHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA