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The map label for this gene is yfbG [C]

Identifier: 220917112

GI number: 220917112

Start: 2262954

End: 2263892

Strand: Direct

Name: yfbG [C]

Synonym: A2cp1_2009

Alternate gene names: 220917112

Gene position: 2262954-2263892 (Clockwise)

Preceding gene: 220917111

Following gene: 220917113

Centisome position: 45.0

GC content: 71.78

Gene sequence:

>939_bases
ATGAGCGAACAGCGAGCGGTCATCCTCGGCGCGGCCGGGTTCATCGGCAGCCACCTCACGGATCGTTTCCTCGCGGAGGG
GTGGCGCGTCACCGGCGTCGACAACCTCATCACGGGTACGCTGCGCAACCTCGAGCACCTCGGCCGGGAGCCGCGCTTCG
ACTTCCTCCAGGCCGACGTCTGCGCGCCGCTCGCCATCTCGGGCCGGGTGGACGCGGTGCTGGACTTCGCCTCCCCGGCG
TCGCCGGTGGACTACCTCCGGCATCCGTTCGAGACGCTCCACGTCGGCTCGGTCGGGGTCGAGAACGCGCTCGAGCTGGC
GCGCCGCAGCGGCGCCCCGTTCGTGCTCTCGTCCACCTCCGAGGTGTACGGTGACCCGCTCGAGCACCCGCAGCGCGAGA
GCTACTGGGGGAACGTGAACCCGGTCGGCCCGCGCGCGGTGTACGACGAGGCCAAGCGCTTCGCCGAGGCCATCACCGTC
GCGTACCGCCGCTACCGCGAGGTGCAGGTCCGCATCGCGCGCATCTTCAACACCTACGGGCCGCGCATGCGGCTCGACGA
CGGCCGGGTGGTGCCGACGTTCGTGGCGCAGGCGCTCCGCGGCGAGCCCATCACCGTGTTCGGCGACGGCTCGCAGACGC
GCAGCTTCTGCTACGTGGACGACAACGTGGAGGCGATCTGGCGGCTGCTCCACGGCGACTGCCAGGACCCGGTGAACGTG
GGCGACGACCACGAGATGACCGTGCTCGAGTTCGCGCAGGCCGTGCAGCGGCTGGTGGGTCGAACGGTGCCCATCGAGCA
CCGGCCGCTCCCGCAGGACGACCCGCGGGTGCGGCGCCCCGATCTCACGCGGGCGAGGGAGCGGCTCGGCTGGGCGCCGC
GGATCGGGTTCGAGGAAGGGATGCGCCGGACCATCGACTGGTTCCGCGCGCACGTCTGA

Upstream 100 bases:

>100_bases
GCAGGGCATCGACCTCGTGCTGGAGAAGTACCGCGGGGCCCTGCCCGGCCAGCTGACGCTCGAGGACGTGGGCGAGGCGA
AGAAATAGATTGCGAGCGGC

Downstream 100 bases:

>100_bases
CCGGCGAGGGCGGGGGACACACCATGGGCAAGCGCATCCTCATCACCGGCGGGGCCGGGTTCATCGGCTCCACCATCGCA
GACCTGTTCGTGCAGGCGGG

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MSEQRAVILGAAGFIGSHLTDRFLAEGWRVTGVDNLITGTLRNLEHLGREPRFDFLQADVCAPLAISGRVDAVLDFASPA
SPVDYLRHPFETLHVGSVGVENALELARRSGAPFVLSSTSEVYGDPLEHPQRESYWGNVNPVGPRAVYDEAKRFAEAITV
AYRRYREVQVRIARIFNTYGPRMRLDDGRVVPTFVAQALRGEPITVFGDGSQTRSFCYVDDNVEAIWRLLHGDCQDPVNV
GDDHEMTVLEFAQAVQRLVGRTVPIEHRPLPQDDPRVRRPDLTRARERLGWAPRIGFEEGMRRTIDWFRAHV

Sequences:

>Translated_312_residues
MSEQRAVILGAAGFIGSHLTDRFLAEGWRVTGVDNLITGTLRNLEHLGREPRFDFLQADVCAPLAISGRVDAVLDFASPA
SPVDYLRHPFETLHVGSVGVENALELARRSGAPFVLSSTSEVYGDPLEHPQRESYWGNVNPVGPRAVYDEAKRFAEAITV
AYRRYREVQVRIARIFNTYGPRMRLDDGRVVPTFVAQALRGEPITVFGDGSQTRSFCYVDDNVEAIWRLLHGDCQDPVNV
GDDHEMTVLEFAQAVQRLVGRTVPIEHRPLPQDDPRVRRPDLTRARERLGWAPRIGFEEGMRRTIDWFRAHV
>Mature_311_residues
SEQRAVILGAAGFIGSHLTDRFLAEGWRVTGVDNLITGTLRNLEHLGREPRFDFLQADVCAPLAISGRVDAVLDFASPAS
PVDYLRHPFETLHVGSVGVENALELARRSGAPFVLSSTSEVYGDPLEHPQRESYWGNVNPVGPRAVYDEAKRFAEAITVA
YRRYREVQVRIARIFNTYGPRMRLDDGRVVPTFVAQALRGEPITVFGDGSQTRSFCYVDDNVEAIWRLLHGDCQDPVNVG
DDHEMTVLEFAQAVQRLVGRTVPIEHRPLPQDDPRVRRPDLTRARERLGWAPRIGFEEGMRRTIDWFRAHV

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI42516563, Length=309, Percent_Identity=50.1618122977346, Blast_Score=329, Evalue=2e-90,
Organism=Homo sapiens, GI7657641, Length=324, Percent_Identity=28.3950617283951, Blast_Score=129, Evalue=3e-30,
Organism=Homo sapiens, GI4504031, Length=343, Percent_Identity=24.4897959183673, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI1788589, Length=341, Percent_Identity=27.8592375366569, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI48994969, Length=339, Percent_Identity=27.4336283185841, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI1788353, Length=340, Percent_Identity=24.7058823529412, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI1786974, Length=336, Percent_Identity=24.4047619047619, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788366, Length=348, Percent_Identity=23.2758620689655, Blast_Score=69, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17539532, Length=312, Percent_Identity=46.474358974359, Blast_Score=311, Evalue=3e-85,
Organism=Caenorhabditis elegans, GI17568069, Length=330, Percent_Identity=29.6969696969697, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI115532424, Length=326, Percent_Identity=28.8343558282209, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17507723, Length=339, Percent_Identity=25.0737463126844, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI21356223, Length=307, Percent_Identity=49.5114006514658, Blast_Score=316, Evalue=1e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 35171; Mature: 35040

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQRAVILGAAGFIGSHLTDRFLAEGWRVTGVDNLITGTLRNLEHLGREPRFDFLQADV
CCCCCEEEEECHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHH
CAPLAISGRVDAVLDFASPASPVDYLRHPFETLHVGSVGVENALELARRSGAPFVLSSTS
CCCEEECCCHHHHEECCCCCCHHHHHHCCHHHEECCCCCHHHHHHHHHHCCCCEEEECCH
EVYGDPLEHPQRESYWGNVNPVGPRAVYDEAKRFAEAITVAYRRYREVQVRIARIFNTYG
HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PRMRLDDGRVVPTFVAQALRGEPITVFGDGSQTRSFCYVDDNVEAIWRLLHGDCQDPVNV
CCEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHCCCCCCCCC
GDDHEMTVLEFAQAVQRLVGRTVPIEHRPLPQDDPRVRRPDLTRARERLGWAPRIGFEEG
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHH
MRRTIDWFRAHV
HHHHHHHHHHCC
>Mature Secondary Structure 
SEQRAVILGAAGFIGSHLTDRFLAEGWRVTGVDNLITGTLRNLEHLGREPRFDFLQADV
CCCCEEEEECHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHH
CAPLAISGRVDAVLDFASPASPVDYLRHPFETLHVGSVGVENALELARRSGAPFVLSSTS
CCCEEECCCHHHHEECCCCCCHHHHHHCCHHHEECCCCCHHHHHHHHHHCCCCEEEECCH
EVYGDPLEHPQRESYWGNVNPVGPRAVYDEAKRFAEAITVAYRRYREVQVRIARIFNTYG
HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PRMRLDDGRVVPTFVAQALRGEPITVFGDGSQTRSFCYVDDNVEAIWRLLHGDCQDPVNV
CCEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHCCCCCCCCC
GDDHEMTVLEFAQAVQRLVGRTVPIEHRPLPQDDPRVRRPDLTRARERLGWAPRIGFEEG
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHH
MRRTIDWFRAHV
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]