| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is yhjL [C]
Identifier: 220917035
GI number: 220917035
Start: 2180180
End: 2182267
Strand: Reverse
Name: yhjL [C]
Synonym: A2cp1_1931
Alternate gene names: 220917035
Gene position: 2182267-2180180 (Counterclockwise)
Preceding gene: 220917036
Following gene: 220917034
Centisome position: 43.39
GC content: 81.37
Gene sequence:
>2088_bases ATGATCCGAGCCCTCCTTGCCGCCGCGCTGGCGGCCGCGATCGCGCTTCCCGCCGCCGCCCGGCCCGCCGGGATCTCGGA GGCCTGGTACCTCGCGCGCGGCCGCGCCAACCTGCGCATCGGCAACTGCGCCGCCGCGGTGGAGGCGTACCGCAAGGCGC TCGCCGAGAACCCGCGCAGCCGCGAGGCGTCGCGCGGCGTGGCGCTCGCGCTGCTCCAGAACGGCGACACCGACCTCGCG GTCGCGGAGCTGGACCGCCACCTGGCGCGGTTCCCCGACGACGCGGAGCTGGCGTTCCGGCAGGCCGGGCTGCTGCAGTG GTCGCGCTACGCCTACCGCTCCAAGGACGCGGTGCGCTACCTGCGCATGGGCCTGGCAGTGCGGGACGATCCCGCCCGGC GGCGCGAGCTGGCGCGGCTGCTGGCGCGCGAGCGCGCCACGCTGGGCGAGGCGCTCGCCGAGTACGACCGGCTGCTCGCG GCCGCCCCGGACGACCGCGCGCTCCGCGACGAGCGGCTGCGGCTGCTGCTCTGGGATCCGGCGAGGCGCGAGGCGGCCGT CGAGGAGCTGCGCCGCCGCCGGCGCGAGGGGCCCGGCGACGCGGCCGCGACGCGCACGCTCGCCGGGCTGCTCGCCGCGG ACGCGCGCACGGCCGGCGAGGCGGTGGGGCTGTACGACGAGCTGCTGGCGCGCCGGCCGGAGGACGCGGAGCTGGCGCTG GGGCGGGCGCGGGCGCTCGCGAAGGCCGGGCGGCGTGCCGAGGCGCGCGATGCCTACGCGCGCGCGATCGCGCTCCGCCC GTCGGCCGAGGCGCGGCTGGAGCGGGCCGAGCTGCTCGCGGCCGACCCGGCCACCCGCGACGAGGCCCGCGCCGAGTACC AGGCGGTGCTGCGGGCCGAGCCGCGCTCGCGGCGCGCGCGCCTCGGGCTGGCGCGCGTGCTCGGCGCCCGCAAGGAGACG AGCGGCGAGGCCATCGCCGCGTACGAGACGGTGCTCGCCTCGGCGCCGCAGGACGCCGAGGCGCACCGCGGCCTGGCGCA GGCGTACGCCTGGAACGGCGACCCCGACCGCGCGCTCGCGCACGGTGACCTCGCCGGCCGCTACGGCCCGGTCCGGCCCG AGCTCGCGGCGCTGGAGCGCGACCTGCGCCGCGGGCGGGAGCCGGCAGCGGGCGGGCTGGCGCGCGCGCTGGCGCAGACG GGCGGAGACTTCGCGATCTCGTCGGCCGGCGCGTTCGCCACCGGCCGCACCGACCCGACGCCGTTCACGACCGGCGCGGT GGAGGCCGGCGCCGCGGCGCACCGCGGCCCGGACGGCGCGCGGGCCGAGGGCGCGCAGGTGCGGGTCACCGGCCGCTGGC GCCCGGACCCGGCCTGGCGCCTCGACGCGGCGGGCGGGTGGGACGGCGCGCGGCGCGCCGGCCAGGGCTTCCAGGGCGCG CTCGGCGTGGAGGGATCGCTGGGGACCGCCACCCTGGCCGCGACCGTCTCGCGCGCGCCGCGCCTCGACTCCTTCCGCGC GTACGCCGGCGAGCTCGTGGACGGGCGCGTGGTCGGCGCCGCCTCCGAGACCGCCGCCGCGGTGCGCGTGGCGCTCGCCG GCCGGGACCTCAGGGGCGAGCTGTCGGCGCGGGCCGGGACCGTCTCCGGCGCGGGCTTGCGCTCCACGTTCCTGGCCGGG GCCGCGGCGCGCGCCGACCGCGTGCTCGCCCGGCCCGGCGGCTTCGAGCTCTCCGCCGGCGGCGCGGTCGAGGCGGTGCA CCACGCCCGCGACCTCTCCGGCGACGGCCCGGTCGCGGATCCGGCCGCGCCGCGCCTGTTCTCGCCCCCGCTGCACGCCA CCGCCTCGCCGCGCCTCACGCTGGCGCGCGGCGACGGCCTGGCCGGGCGCCTCGTCCTCGACGCGGGCCCGGCCGTGCAG CTCACCACCGGCCCGCGCGGCGCGGTCCGCGCGGGCGGCGACGCCCGCGCCGCGGTCTTCCGGCGGCTCGGGCGGATCCA GCTCTCCGCCGAGGCCCGCTACGGCCGGCTCGCCTCGGTGCACACCGCGTTCAGCGGCGCGGTCGGGGCGGAGCTCCTCT TCCCGTGA
Upstream 100 bases:
>100_bases GCGGCTGGGCTTGGCGCTCCAGGCGGAGCCCGTCCCGGGCGCCGAGCCGCATGCCTACCTTGCTGCCTGACGACCTGACG CTCGAGGGGAGTCCCGCCCG
Downstream 100 bases:
>100_bases ACACCGCGCCGCCCCTCCCCGGCCCGGGCTCCGCGCCCTCCGCCGCGCGGCCGGCTCCCGCGCCCGGCGCGCCGGGGCGA GCGCCCCCGCCGTGCGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 695; Mature: 695
Protein sequence:
>695_residues MIRALLAAALAAAIALPAAARPAGISEAWYLARGRANLRIGNCAAAVEAYRKALAENPRSREASRGVALALLQNGDTDLA VAELDRHLARFPDDAELAFRQAGLLQWSRYAYRSKDAVRYLRMGLAVRDDPARRRELARLLARERATLGEALAEYDRLLA AAPDDRALRDERLRLLLWDPARREAAVEELRRRRREGPGDAAATRTLAGLLAADARTAGEAVGLYDELLARRPEDAELAL GRARALAKAGRRAEARDAYARAIALRPSAEARLERAELLAADPATRDEARAEYQAVLRAEPRSRRARLGLARVLGARKET SGEAIAAYETVLASAPQDAEAHRGLAQAYAWNGDPDRALAHGDLAGRYGPVRPELAALERDLRRGREPAAGGLARALAQT GGDFAISSAGAFATGRTDPTPFTTGAVEAGAAAHRGPDGARAEGAQVRVTGRWRPDPAWRLDAAGGWDGARRAGQGFQGA LGVEGSLGTATLAATVSRAPRLDSFRAYAGELVDGRVVGAASETAAAVRVALAGRDLRGELSARAGTVSGAGLRSTFLAG AAARADRVLARPGGFELSAGGAVEAVHHARDLSGDGPVADPAAPRLFSPPLHATASPRLTLARGDGLAGRLVLDAGPAVQ LTTGPRGAVRAGGDARAAVFRRLGRIQLSAEARYGRLASVHTAFSGAVGAELLFP
Sequences:
>Translated_695_residues MIRALLAAALAAAIALPAAARPAGISEAWYLARGRANLRIGNCAAAVEAYRKALAENPRSREASRGVALALLQNGDTDLA VAELDRHLARFPDDAELAFRQAGLLQWSRYAYRSKDAVRYLRMGLAVRDDPARRRELARLLARERATLGEALAEYDRLLA AAPDDRALRDERLRLLLWDPARREAAVEELRRRRREGPGDAAATRTLAGLLAADARTAGEAVGLYDELLARRPEDAELAL GRARALAKAGRRAEARDAYARAIALRPSAEARLERAELLAADPATRDEARAEYQAVLRAEPRSRRARLGLARVLGARKET SGEAIAAYETVLASAPQDAEAHRGLAQAYAWNGDPDRALAHGDLAGRYGPVRPELAALERDLRRGREPAAGGLARALAQT GGDFAISSAGAFATGRTDPTPFTTGAVEAGAAAHRGPDGARAEGAQVRVTGRWRPDPAWRLDAAGGWDGARRAGQGFQGA LGVEGSLGTATLAATVSRAPRLDSFRAYAGELVDGRVVGAASETAAAVRVALAGRDLRGELSARAGTVSGAGLRSTFLAG AAARADRVLARPGGFELSAGGAVEAVHHARDLSGDGPVADPAAPRLFSPPLHATASPRLTLARGDGLAGRLVLDAGPAVQ LTTGPRGAVRAGGDARAAVFRRLGRIQLSAEARYGRLASVHTAFSGAVGAELLFP >Mature_695_residues MIRALLAAALAAAIALPAAARPAGISEAWYLARGRANLRIGNCAAAVEAYRKALAENPRSREASRGVALALLQNGDTDLA VAELDRHLARFPDDAELAFRQAGLLQWSRYAYRSKDAVRYLRMGLAVRDDPARRRELARLLARERATLGEALAEYDRLLA AAPDDRALRDERLRLLLWDPARREAAVEELRRRRREGPGDAAATRTLAGLLAADARTAGEAVGLYDELLARRPEDAELAL GRARALAKAGRRAEARDAYARAIALRPSAEARLERAELLAADPATRDEARAEYQAVLRAEPRSRRARLGLARVLGARKET SGEAIAAYETVLASAPQDAEAHRGLAQAYAWNGDPDRALAHGDLAGRYGPVRPELAALERDLRRGREPAAGGLARALAQT GGDFAISSAGAFATGRTDPTPFTTGAVEAGAAAHRGPDGARAEGAQVRVTGRWRPDPAWRLDAAGGWDGARRAGQGFQGA LGVEGSLGTATLAATVSRAPRLDSFRAYAGELVDGRVVGAASETAAAVRVALAGRDLRGELSARAGTVSGAGLRSTFLAG AAARADRVLARPGGFELSAGGAVEAVHHARDLSGDGPVADPAAPRLFSPPLHATASPRLTLARGDGLAGRLVLDAGPAVQ LTTGPRGAVRAGGDARAAVFRRLGRIQLSAEARYGRLASVHTAFSGAVGAELLFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72922; Mature: 72922
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRALLAAALAAAIALPAAARPAGISEAWYLARGRANLRIGNCAAAVEAYRKALAENPRS CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCEEECHHHHHHHHHHHHHHCCCCC REASRGVALALLQNGDTDLAVAELDRHLARFPDDAELAFRQAGLLQWSRYAYRSKDAVRY HHHHCCEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH LRMGLAVRDDPARRRELARLLARERATLGEALAEYDRLLAAAPDDRALRDERLRLLLWDP HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEECC ARREAAVEELRRRRREGPGDAAATRTLAGLLAADARTAGEAVGLYDELLARRPEDAELAL HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH GRARALAKAGRRAEARDAYARAIALRPSAEARLERAELLAADPATRDEARAEYQAVLRAE HHHHHHHHHCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC PRSRRARLGLARVLGARKETSGEAIAAYETVLASAPQDAEAHRGLAQAYAWNGDPDRALA CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHEE HGDLAGRYGPVRPELAALERDLRRGREPAAGGLARALAQTGGDFAISSAGAFATGRTDPT CCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCEECCCCCCC PFTTGAVEAGAAAHRGPDGARAEGAQVRVTGRWRPDPAWRLDAAGGWDGARRAGQGFQGA CCCCCCCCCCCHHCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCHHHHHCCCCCCCC LGVEGSLGTATLAATVSRAPRLDSFRAYAGELVDGRVVGAASETAAAVRVALAGRDLRGE CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCCCCCH LSARAGTVSGAGLRSTFLAGAAARADRVLARPGGFELSAGGAVEAVHHARDLSGDGPVAD HHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHCCCCCCCCCC PAAPRLFSPPLHATASPRLTLARGDGLAGRLVLDAGPAVQLTTGPRGAVRAGGDARAAVF CCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCEEEEECCCCCCCCCCCCHHHHHH RRLGRIQLSAEARYGRLASVHTAFSGAVGAELLFP HHHCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MIRALLAAALAAAIALPAAARPAGISEAWYLARGRANLRIGNCAAAVEAYRKALAENPRS CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCEEECHHHHHHHHHHHHHHCCCCC REASRGVALALLQNGDTDLAVAELDRHLARFPDDAELAFRQAGLLQWSRYAYRSKDAVRY HHHHCCEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH LRMGLAVRDDPARRRELARLLARERATLGEALAEYDRLLAAAPDDRALRDERLRLLLWDP HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEECC ARREAAVEELRRRRREGPGDAAATRTLAGLLAADARTAGEAVGLYDELLARRPEDAELAL HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH GRARALAKAGRRAEARDAYARAIALRPSAEARLERAELLAADPATRDEARAEYQAVLRAE HHHHHHHHHCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC PRSRRARLGLARVLGARKETSGEAIAAYETVLASAPQDAEAHRGLAQAYAWNGDPDRALA CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHEE HGDLAGRYGPVRPELAALERDLRRGREPAAGGLARALAQTGGDFAISSAGAFATGRTDPT CCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCEECCCCCCC PFTTGAVEAGAAAHRGPDGARAEGAQVRVTGRWRPDPAWRLDAAGGWDGARRAGQGFQGA CCCCCCCCCCCHHCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCHHHHHCCCCCCCC LGVEGSLGTATLAATVSRAPRLDSFRAYAGELVDGRVVGAASETAAAVRVALAGRDLRGE CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCCCCCH LSARAGTVSGAGLRSTFLAGAAARADRVLARPGGFELSAGGAVEAVHHARDLSGDGPVAD HHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHCCCCCCCCCC PAAPRLFSPPLHATASPRLTLARGDGLAGRLVLDAGPAVQLTTGPRGAVRAGGDARAAVF CCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCEEEEECCCCCCCCCCCCHHHHHH RRLGRIQLSAEARYGRLASVHTAFSGAVGAELLFP HHHCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA