| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220917022
Identifier: 220917022
GI number: 220917022
Start: 2158328
End: 2159506
Strand: Reverse
Name: 220917022
Synonym: A2cp1_1918
Alternate gene names: NA
Gene position: 2159506-2158328 (Counterclockwise)
Preceding gene: 220917034
Following gene: 220917021
Centisome position: 42.94
GC content: 77.61
Gene sequence:
>1179_bases GTGTCCCACCCCGCTCCCCGGCCGCCGGGCCGCCCGGCGTTCCTGCCGGTCGCGCTCGCGATCTCGACGGTGCTGGCGGC GGCCGGTGCGGTGGCGTGGGAGCGCACCCCGGCGCGTCGCGCCCGCGCCGCGGCGGCCCGGGCGGAGCGCGCCGGACCCA GCCCGCACGGCCGTCCCCTGCGCCCGGCACGCCTGCTCTCCCGCGGCGCCCAGGTCGCCGCCAGCCGCCCCGGCGCCGCG GTGCTGGTGGACGGCGTCTATCGCGGCGACGCCTGGTCGGGCGGCTTCCCCACGCCCGCGGCGCCGGCCTGGGTGGCGAT CCGCATCGGCCGCGGCCCGAGCCGCGTGCTCCTCTCCTGGACCTCGTCCCACAACCACGACTACCGCGAGCAGCAGTACG GCGCGCCGGTGGACTACCGCATCGAGACCTCGGCCGACTCGCGGGACGGCCGGGACGGCACCTGGCGCACCGCCGTGGAG GCCCGCGGCAACCCGGTGCGCAGCCGCGCCCACGCGCTCGACTTCACCGGCCAGCGCTGGGTGCGGCTGGTGGTCACGGC CCTGTCACCTCGCGTGAACGAGTGGGGCCTGTTCCTCGACGAGATCGACGTCCACGACCTCTCCGTCGGCGGCGACGACG TCTGGGTGTTCCTCGGCGACAGCATCGGCGCCGGCGTGTTCGACCGCGCCGCGGCGCACCGGCCCAGCTTCGCCGACGCG ATCGCCCGGGCGCACCCCGGCTACCAGCCCGCCATGATCGACGCGGGCTTCTGCCGCGCGCGGACCTGGGAGGTGGCCGA GCGGATCGACGAGGTGCTGGCGCTCAACCCGGACGCGAGGGTGTTCGCGATCGTGCTGGGCGCGAACGACGGGGATCTCC CGCGGCTCCGCGCCGGCCTCGAGCGCATCGTCGAGCGCGTCCGGGCCGCCGGGCGCATCCCGGTGGTCGCCCGGATCCCG TTCCAGACGCGGTACGGGTACGACTGGGTCGCGCAGAAGAACGCGGTGGTGGACGCGGTGGTGGCAGCGCAGGGGCTGCT GCCCGGGCCGGACCTGTACGCGTGGTTCCGCGACCGCCCGGACCGGCTCGCCGACGGGCTCCACCCCGACGCGGAGGGGG CGGTGGCGATGAGCCGGCTGTGGGCGGAGGCGGCGGCGCCGCTGTACCCGCCCCCGTGA
Upstream 100 bases:
>100_bases GCAAGGCGCGAGGGGCGCGCCTGGGCGGCGGGCGTGTACGCCTTGCCGCGGGGCCTGCGTCCGTGGACACCCGCCCCGGC CGGCGCTAGAACGCGCAGTC
Downstream 100 bases:
>100_bases CGAGGCGCCGGGCCGGGACGCGCGGTGGCGGCCGCGGCCGGGGCGTGCTTCACTCGCGCGCGCATGAAGCCCCTGCTCGA CTTCGGCCTGCTCGTCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MSHPAPRPPGRPAFLPVALAISTVLAAAGAVAWERTPARRARAAAARAERAGPSPHGRPLRPARLLSRGAQVAASRPGAA VLVDGVYRGDAWSGGFPTPAAPAWVAIRIGRGPSRVLLSWTSSHNHDYREQQYGAPVDYRIETSADSRDGRDGTWRTAVE ARGNPVRSRAHALDFTGQRWVRLVVTALSPRVNEWGLFLDEIDVHDLSVGGDDVWVFLGDSIGAGVFDRAAAHRPSFADA IARAHPGYQPAMIDAGFCRARTWEVAERIDEVLALNPDARVFAIVLGANDGDLPRLRAGLERIVERVRAAGRIPVVARIP FQTRYGYDWVAQKNAVVDAVVAAQGLLPGPDLYAWFRDRPDRLADGLHPDAEGAVAMSRLWAEAAAPLYPPP
Sequences:
>Translated_392_residues MSHPAPRPPGRPAFLPVALAISTVLAAAGAVAWERTPARRARAAAARAERAGPSPHGRPLRPARLLSRGAQVAASRPGAA VLVDGVYRGDAWSGGFPTPAAPAWVAIRIGRGPSRVLLSWTSSHNHDYREQQYGAPVDYRIETSADSRDGRDGTWRTAVE ARGNPVRSRAHALDFTGQRWVRLVVTALSPRVNEWGLFLDEIDVHDLSVGGDDVWVFLGDSIGAGVFDRAAAHRPSFADA IARAHPGYQPAMIDAGFCRARTWEVAERIDEVLALNPDARVFAIVLGANDGDLPRLRAGLERIVERVRAAGRIPVVARIP FQTRYGYDWVAQKNAVVDAVVAAQGLLPGPDLYAWFRDRPDRLADGLHPDAEGAVAMSRLWAEAAAPLYPPP >Mature_391_residues SHPAPRPPGRPAFLPVALAISTVLAAAGAVAWERTPARRARAAAARAERAGPSPHGRPLRPARLLSRGAQVAASRPGAAV LVDGVYRGDAWSGGFPTPAAPAWVAIRIGRGPSRVLLSWTSSHNHDYREQQYGAPVDYRIETSADSRDGRDGTWRTAVEA RGNPVRSRAHALDFTGQRWVRLVVTALSPRVNEWGLFLDEIDVHDLSVGGDDVWVFLGDSIGAGVFDRAAAHRPSFADAI ARAHPGYQPAMIDAGFCRARTWEVAERIDEVLALNPDARVFAIVLGANDGDLPRLRAGLERIVERVRAAGRIPVVARIPF QTRYGYDWVAQKNAVVDAVVAAQGLLPGPDLYAWFRDRPDRLADGLHPDAEGAVAMSRLWAEAAAPLYPPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42328; Mature: 42197
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHPAPRPPGRPAFLPVALAISTVLAAAGAVAWERTPARRARAAAARAERAGPSPHGRPL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC RPARLLSRGAQVAASRPGAAVLVDGVYRGDAWSGGFPTPAAPAWVAIRIGRGPSRVLLSW CHHHHHHCCHHHHCCCCCCEEEEECEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEE TSSHNHDYREQQYGAPVDYRIETSADSRDGRDGTWRTAVEARGNPVRSRAHALDFTGQRW CCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCEEEHHHCCCCCHHHHHHHCCCCHHHH VRLVVTALSPRVNEWGLFLDEIDVHDLSVGGDDVWVFLGDSIGAGVFDRAAAHRPSFADA HHHHHHHHCCCCCHHCCEEECCCCEEEECCCCEEEEEECCCCCCCHHHHHHHCCCHHHHH IARAHPGYQPAMIDAGFCRARTWEVAERIDEVLALNPDARVFAIVLGANDGDLPRLRAGL HHHCCCCCCCCEECCCHHHCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHH ERIVERVRAAGRIPVVARIPFQTRYGYDWVAQKNAVVDAVVAAQGLLPGPDLYAWFRDRP HHHHHHHHHCCCCCEEEECCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCHHHHHHCCH DRLADGLHPDAEGAVAMSRLWAEAAAPLYPPP HHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SHPAPRPPGRPAFLPVALAISTVLAAAGAVAWERTPARRARAAAARAERAGPSPHGRPL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC RPARLLSRGAQVAASRPGAAVLVDGVYRGDAWSGGFPTPAAPAWVAIRIGRGPSRVLLSW CHHHHHHCCHHHHCCCCCCEEEEECEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEE TSSHNHDYREQQYGAPVDYRIETSADSRDGRDGTWRTAVEARGNPVRSRAHALDFTGQRW CCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCEEEHHHCCCCCHHHHHHHCCCCHHHH VRLVVTALSPRVNEWGLFLDEIDVHDLSVGGDDVWVFLGDSIGAGVFDRAAAHRPSFADA HHHHHHHHCCCCCHHCCEEECCCCEEEECCCCEEEEEECCCCCCCHHHHHHHCCCHHHHH IARAHPGYQPAMIDAGFCRARTWEVAERIDEVLALNPDARVFAIVLGANDGDLPRLRAGL HHHCCCCCCCCEECCCHHHCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHH ERIVERVRAAGRIPVVARIPFQTRYGYDWVAQKNAVVDAVVAAQGLLPGPDLYAWFRDRP HHHHHHHHHCCCCCEEEECCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCHHHHHHCCH DRLADGLHPDAEGAVAMSRLWAEAAAPLYPPP HHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA