| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is 220916963
Identifier: 220916963
GI number: 220916963
Start: 2081083
End: 2082264
Strand: Reverse
Name: 220916963
Synonym: A2cp1_1859
Alternate gene names: NA
Gene position: 2082264-2081083 (Counterclockwise)
Preceding gene: 220916964
Following gene: 220916962
Centisome position: 41.4
GC content: 73.94
Gene sequence:
>1182_bases ATGATCGACACCGTCATACGGCTCGCGTGCGCCGCCGCGCTCGCGGCCTCCGCGCCGGCCCTCGCGGCCGAGCCGGCCAC CGCACCCGAGAAGCCCTCGGTCGCGCTCCACGGGTTCGTGTCCGCCACCGTGTTCGTGCAGGACGCGACCACCGGTCCCT GGAATGGCCAGGGCTCCCTGTTCACCGTGACCGAGCCGCGCACCGACGAGACGTTCCTCGGCGGCGACCTGCGCCAGACC CGGCTCCAGCTCGCCGCCACGGGGCCCGCCATCCTCTCCGGCCGCGCCACGCCGCGCGCGCTGGTCGAGGCCGACTTCTT CGGCGGCAACACCGGCGGCGCGTTCGGCGACGAGTCGGTGGGGCCGCGGCTGCGCCTCGCCTACGCCGAGCTGGTGCTGG GCAACACCACCTTCCAGGTGGGCCAGAACCACGGGCTCATCTTCGCCATGGCGCCGGTGAGCCTCGCGCACGTCGCGTTC CCCGCCAGCTACGCGGCGGGCGGCATCGGCTGGCGCTTCCCCGGCGTGATGGTGTTCCACCGCATCCCGCTCGCCGGCGC CCACGTCCTCGAGCTGGCGGTGAGCGCCACCCGCGGCTCCTGGAGCGACGCGGACGCCGACCTGCCGCTGGGCGTCTCCT ACGGCGAGGCGTCCTCGATCCCGCAGGTCGAGGCGCGCGCCATGCTGAGCGGCAAGCCCGCCGACGGCGTCGCCTACTCC GCGTTCCTGGTCGGCCACTACGATCGCAAGGACCTGACCGGCGTGGGCGCCACCGCCCCGGAGGACGGCGTGGACGGCTG GGCCGCCGAGCTGGGCGGCAAGGTGACCGCGGGCCGGCTCCAGCTCGCCGCGAACGGCTGGACGGGCCAGGCGGTCGGCC AGCTCTTCGGCGCCATCGTGCAGTTCGGGGACATCCAGGGCTGGGGTGCCTGGGCGCAGGCGGGATGGTCGTTCACCGAC ACCGTCTCCGCCCACCTGTTCGCCGGCATGGACGATCCGGACGACGCCGACGTCCGCGAGGCCGGCGCCACGCGCCTCCG CAACGTGTCGGTCGGCGCGCTGACCAAGTACTGCGAGGGGCCCTACACCCTCGGCCTGGAGTACTACCGGTACGAGACCC GGACCATCACCGGAACCCGCACCGCCGACCAGGGGTCCCTGACCGCGATGTACTCCTTCTGA
Upstream 100 bases:
>100_bases TCGGAGAACTACTGCCTCAACTGCCACCCCAAGTTCGAGATGAAGAAGCTGCCGGGCGCGGAGCGTTGACGCCCGGTCAC GCAGCACCGGAGGAGACACC
Downstream 100 bases:
>100_bases CCAGCGGTGAACCCCTCGCAGCCCCGGGCCCCCGGCCGCGTCCCGCTCGCGGCCGGGGGCCCACTCGTCCGGGCGCGTCC GCCCCGCGAAGCAGCCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MIDTVIRLACAAALAASAPALAAEPATAPEKPSVALHGFVSATVFVQDATTGPWNGQGSLFTVTEPRTDETFLGGDLRQT RLQLAATGPAILSGRATPRALVEADFFGGNTGGAFGDESVGPRLRLAYAELVLGNTTFQVGQNHGLIFAMAPVSLAHVAF PASYAAGGIGWRFPGVMVFHRIPLAGAHVLELAVSATRGSWSDADADLPLGVSYGEASSIPQVEARAMLSGKPADGVAYS AFLVGHYDRKDLTGVGATAPEDGVDGWAAELGGKVTAGRLQLAANGWTGQAVGQLFGAIVQFGDIQGWGAWAQAGWSFTD TVSAHLFAGMDDPDDADVREAGATRLRNVSVGALTKYCEGPYTLGLEYYRYETRTITGTRTADQGSLTAMYSF
Sequences:
>Translated_393_residues MIDTVIRLACAAALAASAPALAAEPATAPEKPSVALHGFVSATVFVQDATTGPWNGQGSLFTVTEPRTDETFLGGDLRQT RLQLAATGPAILSGRATPRALVEADFFGGNTGGAFGDESVGPRLRLAYAELVLGNTTFQVGQNHGLIFAMAPVSLAHVAF PASYAAGGIGWRFPGVMVFHRIPLAGAHVLELAVSATRGSWSDADADLPLGVSYGEASSIPQVEARAMLSGKPADGVAYS AFLVGHYDRKDLTGVGATAPEDGVDGWAAELGGKVTAGRLQLAANGWTGQAVGQLFGAIVQFGDIQGWGAWAQAGWSFTD TVSAHLFAGMDDPDDADVREAGATRLRNVSVGALTKYCEGPYTLGLEYYRYETRTITGTRTADQGSLTAMYSF >Mature_393_residues MIDTVIRLACAAALAASAPALAAEPATAPEKPSVALHGFVSATVFVQDATTGPWNGQGSLFTVTEPRTDETFLGGDLRQT RLQLAATGPAILSGRATPRALVEADFFGGNTGGAFGDESVGPRLRLAYAELVLGNTTFQVGQNHGLIFAMAPVSLAHVAF PASYAAGGIGWRFPGVMVFHRIPLAGAHVLELAVSATRGSWSDADADLPLGVSYGEASSIPQVEARAMLSGKPADGVAYS AFLVGHYDRKDLTGVGATAPEDGVDGWAAELGGKVTAGRLQLAANGWTGQAVGQLFGAIVQFGDIQGWGAWAQAGWSFTD TVSAHLFAGMDDPDDADVREAGATRLRNVSVGALTKYCEGPYTLGLEYYRYETRTITGTRTADQGSLTAMYSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40852; Mature: 40852
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDTVIRLACAAALAASAPALAAEPATAPEKPSVALHGFVSATVFVQDATTGPWNGQGSL CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCE FTVTEPRTDETFLGGDLRQTRLQLAATGPAILSGRATPRALVEADFFGGNTGGAFGDESV EEEECCCCCCEECCCCHHHHEEEEEECCCHHCCCCCCCHHEEEEECCCCCCCCCCCCCCC GPRLRLAYAELVLGNTTFQVGQNHGLIFAMAPVSLAHVAFPASYAAGGIGWRFPGVMVFH CCEEEEEEEHHHCCCCEEEECCCCCEEEEECCHHHHHHHCCHHHCCCCCCCCCCCEEEEE RIPLAGAHVLELAVSATRGSWSDADADLPLGVSYGEASSIPQVEARAMLSGKPADGVAYS ECCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHCCCCCCCCEEE AFLVGHYDRKDLTGVGATAPEDGVDGWAAELGGKVTAGRLQLAANGWTGQAVGQLFGAIV EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEECEEEEEECCCCHHHHHHHHHHHH QFGDIQGWGAWAQAGWSFTDTVSAHLFAGMDDPDDADVREAGATRLRNVSVGALTKYCEG HHCCCCCCCHHHHCCCCCHHHCEEHEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCC PYTLGLEYYRYETRTITGTRTADQGSLTAMYSF CEEECEEEEEEEEEEEECCCCCCCCCEEEEEEC >Mature Secondary Structure MIDTVIRLACAAALAASAPALAAEPATAPEKPSVALHGFVSATVFVQDATTGPWNGQGSL CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCE FTVTEPRTDETFLGGDLRQTRLQLAATGPAILSGRATPRALVEADFFGGNTGGAFGDESV EEEECCCCCCEECCCCHHHHEEEEEECCCHHCCCCCCCHHEEEEECCCCCCCCCCCCCCC GPRLRLAYAELVLGNTTFQVGQNHGLIFAMAPVSLAHVAFPASYAAGGIGWRFPGVMVFH CCEEEEEEEHHHCCCCEEEECCCCCEEEEECCHHHHHHHCCHHHCCCCCCCCCCCEEEEE RIPLAGAHVLELAVSATRGSWSDADADLPLGVSYGEASSIPQVEARAMLSGKPADGVAYS ECCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHCCCCCCCCEEE AFLVGHYDRKDLTGVGATAPEDGVDGWAAELGGKVTAGRLQLAANGWTGQAVGQLFGAIV EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEECEEEEEECCCCHHHHHHHHHHHH QFGDIQGWGAWAQAGWSFTDTVSAHLFAGMDDPDDADVREAGATRLRNVSVGALTKYCEG HHCCCCCCCHHHHCCCCCHHHCEEHEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCC PYTLGLEYYRYETRTITGTRTADQGSLTAMYSF CEEECEEEEEEEEEEEECCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA