| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220916893
Identifier: 220916893
GI number: 220916893
Start: 1998985
End: 2000217
Strand: Reverse
Name: 220916893
Synonym: A2cp1_1789
Alternate gene names: NA
Gene position: 2000217-1998985 (Counterclockwise)
Preceding gene: 220916894
Following gene: 220916892
Centisome position: 39.77
GC content: 72.26
Gene sequence:
>1233_bases ATGACCGCGGGTCCCGGGCTCGTCGGCCTGCAGGTCCGGCCCGGCCACCCGGACTTCCTCGACCTGCCATGGGATCTCCC GCTCTCCCGCTGGGGCGAGCGCTGCGCGCGCATCGTGGAGGTGACGCGCGGCGTCTCGCGGCACGACGTGCTGTTCCTCC AGTACGATCGGGCGCTGTACGTCGTGAAGGAGCTGCCGCCGGCGCTGGGCGAGCGGGAGTACGGCGCGCTGCGCTGGCTC GAGGACCGCGAGCTCCCGGCGGTCGTCGCCGCGGGACACGCCCACGTTCGCACCGGCGAGGGCGACGCGAGCGTGCTCAT CACGCGGTTCCTCGACCGGTCGTTGCCCTTTCGCACCCTGTTCGAGAACGCCGGCCTGGAAACGTACCGGGCGCGCCTGC TCGACGCGATCGCCGGGCTGCTGGTGCGGCTCCACCTCGGCGGCTTCTACTGGGGCGACTGCTCGCTCTCGAACACGCTG TTCCGCAGGGACGCGGGCGAGCTGCGCGCGTACCTCGTCGATGCCGAGACGGCGGAGATGCACGACCCCCTCTCCGACGG CCAGCGGCGGCACGACATCGAGATCCTGGAGGAGAACGTCACCGGCGACCTCCTCGACGTCGCCGCCATGCTGGGGGTGG CTCCGCCGCCCTGGCTGTACGAGACCGGCGCCGCGCTGCGCGCTCGCTACGAGCAGCTGTGGGGCGAGATCACGCGCGAG GAGCTCATCTCCGCCGGCGAGAGCTGGCGCATCCACGAGCGCATCCGTTCGCTCAATGCGCTGGGGTTCACCGTGGGAGA GGTGAAGCTGGAGCCGACCGGCGACGGCAGCCGCCTCCGAATGCGGGCGGTGGTGACCGACCGCGATTACCACCGCGACC TCCTGCACGCGCTCACCGGGCTCGTGGCGGAGGACCGGCAAGCCGCGCTGATGGTGAACGAGATCCAGGAGCTGCGCGCC ACGCTGGTGCGGCGCGAGAACCGGAGCGTCGCGCTCGCGGTCGCCGCGTACCGCTGGCTCAACGAGCGCTGGCTGCCGGC GATCCGCAAGCTCGCACCGCGCCCCGGCAGCGATCCCGCTGAGCTGTACTGCCAGCTGCTGGAGCACAAGTGGTACCTGT CCGAGCGCGCCCGCCGCGACGTCGGCTTCGACGCCGCCCTGGAGGATTGGCTGCGGCGCTTCCCGCCGCCCGCGGCTCGC CCTCCTTCTCCTCCTCCTCCCGACCCAGAGTAG
Upstream 100 bases:
>100_bases GCCGCCGGCACGCGGTCGCGACCCCCACGAACGCATTCCTGGGCCAGGCCATCGCGGCGCTCGACGCGATCGCGGCCGCG CGCGGGGCCGGGGGCGTCGC
Downstream 100 bases:
>100_bases TTTTTCTCGGACGCAGGTCCGTCGCGCGGACCGTTCACCGCGCCGAAAGGCGCGTCAGGACGTGGCTTGGACGTGGCACG CCCGGTGCCATGGGCGACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MTAGPGLVGLQVRPGHPDFLDLPWDLPLSRWGERCARIVEVTRGVSRHDVLFLQYDRALYVVKELPPALGEREYGALRWL EDRELPAVVAAGHAHVRTGEGDASVLITRFLDRSLPFRTLFENAGLETYRARLLDAIAGLLVRLHLGGFYWGDCSLSNTL FRRDAGELRAYLVDAETAEMHDPLSDGQRRHDIEILEENVTGDLLDVAAMLGVAPPPWLYETGAALRARYEQLWGEITRE ELISAGESWRIHERIRSLNALGFTVGEVKLEPTGDGSRLRMRAVVTDRDYHRDLLHALTGLVAEDRQAALMVNEIQELRA TLVRRENRSVALAVAAYRWLNERWLPAIRKLAPRPGSDPAELYCQLLEHKWYLSERARRDVGFDAALEDWLRRFPPPAAR PPSPPPPDPE
Sequences:
>Translated_410_residues MTAGPGLVGLQVRPGHPDFLDLPWDLPLSRWGERCARIVEVTRGVSRHDVLFLQYDRALYVVKELPPALGEREYGALRWL EDRELPAVVAAGHAHVRTGEGDASVLITRFLDRSLPFRTLFENAGLETYRARLLDAIAGLLVRLHLGGFYWGDCSLSNTL FRRDAGELRAYLVDAETAEMHDPLSDGQRRHDIEILEENVTGDLLDVAAMLGVAPPPWLYETGAALRARYEQLWGEITRE ELISAGESWRIHERIRSLNALGFTVGEVKLEPTGDGSRLRMRAVVTDRDYHRDLLHALTGLVAEDRQAALMVNEIQELRA TLVRRENRSVALAVAAYRWLNERWLPAIRKLAPRPGSDPAELYCQLLEHKWYLSERARRDVGFDAALEDWLRRFPPPAAR PPSPPPPDPE >Mature_409_residues TAGPGLVGLQVRPGHPDFLDLPWDLPLSRWGERCARIVEVTRGVSRHDVLFLQYDRALYVVKELPPALGEREYGALRWLE DRELPAVVAAGHAHVRTGEGDASVLITRFLDRSLPFRTLFENAGLETYRARLLDAIAGLLVRLHLGGFYWGDCSLSNTLF RRDAGELRAYLVDAETAEMHDPLSDGQRRHDIEILEENVTGDLLDVAAMLGVAPPPWLYETGAALRARYEQLWGEITREE LISAGESWRIHERIRSLNALGFTVGEVKLEPTGDGSRLRMRAVVTDRDYHRDLLHALTGLVAEDRQAALMVNEIQELRAT LVRRENRSVALAVAAYRWLNERWLPAIRKLAPRPGSDPAELYCQLLEHKWYLSERARRDVGFDAALEDWLRRFPPPAARP PSPPPPDPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46382; Mature: 46251
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGPGLVGLQVRPGHPDFLDLPWDLPLSRWGERCARIVEVTRGVSRHDVLFLQYDRALY CCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHCEEEEEECCHHH VVKELPPALGEREYGALRWLEDRELPAVVAAGHAHVRTGEGDASVLITRFLDRSLPFRTL HHHHCCHHCCCCCCCHHEECCCCCCCEEEECCCCEEECCCCCHHHHHHHHHHCCCCHHHH FENAGLETYRARLLDAIAGLLVRLHLGGFYWGDCSLSNTLFRRDAGELRAYLVDAETAEM HHHCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHCCHHHHHEEEECCCHHHH HDPLSDGQRRHDIEILEENVTGDLLDVAAMLGVAPPPWLYETGAALRARYEQLWGEITRE CCCHHCCCHHCCHHHHHHCCCHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHH ELISAGESWRIHERIRSLNALGFTVGEVKLEPTGDGSRLRMRAVVTDRDYHRDLLHALTG HHHCCCCCCCHHHHHHHHHHHCEEEEEEEEECCCCCCEEEEEEEECCCHHHHHHHHHHHH LVAEDRQAALMVNEIQELRATLVRRENRSVALAVAAYRWLNERWLPAIRKLAPRPGSDPA HHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHH ELYCQLLEHKWYLSERARRDVGFDAALEDWLRRFPPPAARPPSPPPPDPE HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TAGPGLVGLQVRPGHPDFLDLPWDLPLSRWGERCARIVEVTRGVSRHDVLFLQYDRALY CCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHCEEEEEECCHHH VVKELPPALGEREYGALRWLEDRELPAVVAAGHAHVRTGEGDASVLITRFLDRSLPFRTL HHHHCCHHCCCCCCCHHEECCCCCCCEEEECCCCEEECCCCCHHHHHHHHHHCCCCHHHH FENAGLETYRARLLDAIAGLLVRLHLGGFYWGDCSLSNTLFRRDAGELRAYLVDAETAEM HHHCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHCCHHHHHEEEECCCHHHH HDPLSDGQRRHDIEILEENVTGDLLDVAAMLGVAPPPWLYETGAALRARYEQLWGEITRE CCCHHCCCHHCCHHHHHHCCCHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHH ELISAGESWRIHERIRSLNALGFTVGEVKLEPTGDGSRLRMRAVVTDRDYHRDLLHALTG HHHCCCCCCCHHHHHHHHHHHCEEEEEEEEECCCCCCEEEEEEEECCCHHHHHHHHHHHH LVAEDRQAALMVNEIQELRATLVRRENRSVALAVAAYRWLNERWLPAIRKLAPRPGSDPA HHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHH ELYCQLLEHKWYLSERARRDVGFDAALEDWLRRFPPPAARPPSPPPPDPE HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA