| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220916842
Identifier: 220916842
GI number: 220916842
Start: 1940418
End: 1941401
Strand: Reverse
Name: 220916842
Synonym: A2cp1_1738
Alternate gene names: NA
Gene position: 1941401-1940418 (Counterclockwise)
Preceding gene: 220916843
Following gene: 220916841
Centisome position: 38.6
GC content: 79.37
Gene sequence:
>984_bases GTGCGCTTCGCCTCGCTGATCGCGGCCGTGGCGCTGCTGGTGGCCTGCGGGGATCGCCGGCCGCCGCGGACGCGCCTGGT CCTCGCCTCCGTGCGGCAGCCCGCCACCGCGCTCCCGCTCGTGGCCGCCGCCAGCGGCTGCTTCGCCGCCGAGGGGCTGG ACGTCGAGGAGCGGTCCTTCGACCTGGGGCGCGACGCGCTCGCGCTGCTCCGCGCCGGCGGCGCCGACGTGGCGGTCGCG TTCGAGACGCCGGTGCTCCAGGCCGCCCACGCCGACGGCAGGCTCCGCGCGCTCACCGCCCTGCACACCTCGACCCGCAA CACGCGCCTGGTGGTGCGCGCCGCGAGCGGGATCCGCGGCTTCTCCGACCTGGGCGGGCGCCGGATCGGCCTCGCGCCCG GCACGAACGCCGACTTCTTCGCCGGCCTGGCGCTCCGCCTGGGCGGCGTCCCGCGCGATCGGGTGGCGCTCGTGCCCGGC GCGCCGGCCGAGTCGATCGAGGCGCTCGCCGCGGGCGCGCTCGACGCCGCGGTCCTCTCCGACCCGCCCGCGCAGGAGGC CGAGCGCCGCCTCGGACCCGACGCGCAGGTGTTCCAGACCGACCTCTACGTCGAGGTCTCGCTCCTCGTCACCCGCGACG ACGTGCTGGCGGCCCGGCCCGCGGCGCTGCGGGCGCTGCTGCGGGGCCTGACGTGCGGCGAGCGGCGCGTCCGCGCCGAC CGCGAGGGGGCGCGGGCGCTGATCCGCGGCCGCTTCCCGGAGACCGGCGACGCCGCGCTCGCCGCGCAGCTGGAGCGGGT GCGCTGGGGGATCGGCCTCGACAACGTGCTCCTGGACGTGCTGCGCCGCGAGCGCGACGCGCTCACCGCCGCGGGCGCGC TGCGCGGCGACGCGCCCGACCTGCACCAGCTCGTCGCGCCCGCCCTGCTCGAGCAGGTGGCGCCCGAGGCGGTCATGCTG CTCCCCGGGGACGCGCGATGGTGA
Upstream 100 bases:
>100_bases CCGCGGGCGCCAGCGGCGCGATGCCACGGGCGGCGGATCACCGCTCCCCCGGACCCCCGGCGTGGTACACAGGCCGGGGC GGACCTGAGCGGAGGAGCGC
Downstream 100 bases:
>100_bases CCGTCGGCCGGCGGCTGCTCGTGCCCACCACGCTGCTCGCCGCCGTGGCCTGCGCGGCGCTGGCCTACGCGGCGTGGTCG TCCGCGCAGCAGGCGCGCAC
Product: NMT1/THI5 like domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MRFASLIAAVALLVACGDRRPPRTRLVLASVRQPATALPLVAAASGCFAAEGLDVEERSFDLGRDALALLRAGGADVAVA FETPVLQAAHADGRLRALTALHTSTRNTRLVVRAASGIRGFSDLGGRRIGLAPGTNADFFAGLALRLGGVPRDRVALVPG APAESIEALAAGALDAAVLSDPPAQEAERRLGPDAQVFQTDLYVEVSLLVTRDDVLAARPAALRALLRGLTCGERRVRAD REGARALIRGRFPETGDAALAAQLERVRWGIGLDNVLLDVLRRERDALTAAGALRGDAPDLHQLVAPALLEQVAPEAVML LPGDARW
Sequences:
>Translated_327_residues MRFASLIAAVALLVACGDRRPPRTRLVLASVRQPATALPLVAAASGCFAAEGLDVEERSFDLGRDALALLRAGGADVAVA FETPVLQAAHADGRLRALTALHTSTRNTRLVVRAASGIRGFSDLGGRRIGLAPGTNADFFAGLALRLGGVPRDRVALVPG APAESIEALAAGALDAAVLSDPPAQEAERRLGPDAQVFQTDLYVEVSLLVTRDDVLAARPAALRALLRGLTCGERRVRAD REGARALIRGRFPETGDAALAAQLERVRWGIGLDNVLLDVLRRERDALTAAGALRGDAPDLHQLVAPALLEQVAPEAVML LPGDARW >Mature_327_residues MRFASLIAAVALLVACGDRRPPRTRLVLASVRQPATALPLVAAASGCFAAEGLDVEERSFDLGRDALALLRAGGADVAVA FETPVLQAAHADGRLRALTALHTSTRNTRLVVRAASGIRGFSDLGGRRIGLAPGTNADFFAGLALRLGGVPRDRVALVPG APAESIEALAAGALDAAVLSDPPAQEAERRLGPDAQVFQTDLYVEVSLLVTRDDVLAARPAALRALLRGLTCGERRVRAD REGARALIRGRFPETGDAALAAQLERVRWGIGLDNVLLDVLRRERDALTAAGALRGDAPDLHQLVAPALLEQVAPEAVML LPGDARW
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34340; Mature: 34340
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFASLIAAVALLVACGDRRPPRTRLVLASVRQPATALPLVAAASGCFAAEGLDVEERSF CCHHHHHHHHHHHHHHCCCCCCHHHEEEHHHCCCCHHHHHHHHHCCCHHHCCCCHHHHHH DLGRDALALLRAGGADVAVAFETPVLQAAHADGRLRALTALHTSTRNTRLVVRAASGIRG HCCHHHHHHHHCCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCC FSDLGGRRIGLAPGTNADFFAGLALRLGGVPRDRVALVPGAPAESIEALAAGALDAAVLS HHHCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHC DPPAQEAERRLGPDAQVFQTDLYVEVSLLVTRDDVLAARPAALRALLRGLTCGERRVRAD CCCHHHHHHHCCCCHHHEEEEEEEEEEEEEECCHHHHCCHHHHHHHHHHCCCCHHHHHCC REGARALIRGRFPETGDAALAAQLERVRWGIGLDNVLLDVLRRERDALTAAGALRGDAPD HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH LHQLVAPALLEQVAPEAVMLLPGDARW HHHHHHHHHHHHHCCCEEEEECCCCCC >Mature Secondary Structure MRFASLIAAVALLVACGDRRPPRTRLVLASVRQPATALPLVAAASGCFAAEGLDVEERSF CCHHHHHHHHHHHHHHCCCCCCHHHEEEHHHCCCCHHHHHHHHHCCCHHHCCCCHHHHHH DLGRDALALLRAGGADVAVAFETPVLQAAHADGRLRALTALHTSTRNTRLVVRAASGIRG HCCHHHHHHHHCCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCC FSDLGGRRIGLAPGTNADFFAGLALRLGGVPRDRVALVPGAPAESIEALAAGALDAAVLS HHHCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHC DPPAQEAERRLGPDAQVFQTDLYVEVSLLVTRDDVLAARPAALRALLRGLTCGERRVRAD CCCHHHHHHHCCCCHHHEEEEEEEEEEEEEECCHHHHCCHHHHHHHHHHCCCCHHHHHCC REGARALIRGRFPETGDAALAAQLERVRWGIGLDNVLLDVLRRERDALTAAGALRGDAPD HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH LHQLVAPALLEQVAPEAVMLLPGDARW HHHHHHHHHHHHHCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA