| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220916802
Identifier: 220916802
GI number: 220916802
Start: 1890650
End: 1891645
Strand: Reverse
Name: 220916802
Synonym: A2cp1_1697
Alternate gene names: NA
Gene position: 1891645-1890650 (Counterclockwise)
Preceding gene: 220916803
Following gene: 220916801
Centisome position: 37.61
GC content: 72.69
Gene sequence:
>996_bases ATGAGCCCGAATCGCATGCACCGAGCCGCCGCCCGGCTCGCCGTCCCGCTCCTCGCGGCCGCCGCGCTCGCGGCGACCCC GGCCCGCGCCGCCTACCCGGAGCGCCCCATCACCATGATCGTCCCGTTCGCCGCGGGCGGCCCCACCGACGTGGTGGCGC GGATCGTGGCCGAGCACATGTCGCGCACGCTCGGCCAGCAGGTGGTGATCGAGAACGTGGCCGGCGCCGGCGGCACCACC GGCATCCTGCGCGCCTCCCAGGCAGCGCCGGACGGCTACACCATCATGATGGGCCACATGGGCACGCACGGCGCCGCGCC GGCCGTGTACCCGGACCTGAAGTACGATCCGCGCACGGACTTCGCGCCCATCGGGCTCGCCGCCGGCACGCCCATCGTGG TGGTCGCGCGCAAGGACTTCCCGGCCAAGGACTTCAAGGAGTTCGTCGCGAAGGTGAAGGCGGACTCGGAGAAGCTGAAC GAGGCGCACGCCGGCGTCGGCTCGGTCTCGTTCACCACCTGCTCGCTGTTCAACTCGCTGCTCGGCGCGAAGCCGACGCG CGTGGTGTACCGCGGCACCGGGCCCGCGCTGAACGACCTGGTGGCCGGCCAGGTGGACTACATGTGCGACCAGATCGTGA ACCTGGTGCCGCAGATCCAGGCCGGCACCATCAAGGCGTACGCGGTGGCGCTGCCCGAGCGCTCGCCGGCGCTGCCCGAC GTGCCCACCACCAAGGAAGGCGGGCTGCCGGAGTTCCAGGTGACGGCCTGGAACGCGGTGTTCGCGCCCAAGGGGACGCC GCCGGCGGTGGTGAAGCGGCTCTCCCAGGCGCTGCTCGCGTCGCTCGACGACGCGGCCACGCGCAAGCGGCTGCTCGACC TCGGCGGCGACCTCTCCAACACCGCCGCGCGCACGCCGGAGGGGCTGCAGAAGCTGGTCGAGAGCGAGGTGGCGCGCTGG AACAAGGTGCTGAAGGCCACCGGCGCCGCGAAGTGA
Upstream 100 bases:
>100_bases AGCGTCCCATCAGCGCGGCCTTCCTCGCGCTCGCCCTCGTCGTGCTGGTCCTCGCAGTGCTGCCCGCGGTGCGCACGCGC CGCAAGGAGGTGTTCGTCGA
Downstream 100 bases:
>100_bases GCCGCACCGCGGCACCGCCCGCGCGCCCTTCCGGCGCGGGCGGTGCCCGGACGCCCCGCCACCCGTCCGCCTGGGCGCGT TTCGGCACCCGGTTGGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: ORFY [H]
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MSPNRMHRAAARLAVPLLAAAALAATPARAAYPERPITMIVPFAAGGPTDVVARIVAEHMSRTLGQQVVIENVAGAGGTT GILRASQAAPDGYTIMMGHMGTHGAAPAVYPDLKYDPRTDFAPIGLAAGTPIVVVARKDFPAKDFKEFVAKVKADSEKLN EAHAGVGSVSFTTCSLFNSLLGAKPTRVVYRGTGPALNDLVAGQVDYMCDQIVNLVPQIQAGTIKAYAVALPERSPALPD VPTTKEGGLPEFQVTAWNAVFAPKGTPPAVVKRLSQALLASLDDAATRKRLLDLGGDLSNTAARTPEGLQKLVESEVARW NKVLKATGAAK
Sequences:
>Translated_331_residues MSPNRMHRAAARLAVPLLAAAALAATPARAAYPERPITMIVPFAAGGPTDVVARIVAEHMSRTLGQQVVIENVAGAGGTT GILRASQAAPDGYTIMMGHMGTHGAAPAVYPDLKYDPRTDFAPIGLAAGTPIVVVARKDFPAKDFKEFVAKVKADSEKLN EAHAGVGSVSFTTCSLFNSLLGAKPTRVVYRGTGPALNDLVAGQVDYMCDQIVNLVPQIQAGTIKAYAVALPERSPALPD VPTTKEGGLPEFQVTAWNAVFAPKGTPPAVVKRLSQALLASLDDAATRKRLLDLGGDLSNTAARTPEGLQKLVESEVARW NKVLKATGAAK >Mature_330_residues SPNRMHRAAARLAVPLLAAAALAATPARAAYPERPITMIVPFAAGGPTDVVARIVAEHMSRTLGQQVVIENVAGAGGTTG ILRASQAAPDGYTIMMGHMGTHGAAPAVYPDLKYDPRTDFAPIGLAAGTPIVVVARKDFPAKDFKEFVAKVKADSEKLNE AHAGVGSVSFTTCSLFNSLLGAKPTRVVYRGTGPALNDLVAGQVDYMCDQIVNLVPQIQAGTIKAYAVALPERSPALPDV PTTKEGGLPEFQVTAWNAVFAPKGTPPAVVKRLSQALLASLDDAATRKRLLDLGGDLSNTAARTPEGLQKLVESEVARWN KVLKATGAAK
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34591; Mature: 34460
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPNRMHRAAARLAVPLLAAAALAATPARAAYPERPITMIVPFAAGGPTDVVARIVAEHM CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHH SRTLGQQVVIENVAGAGGTTGILRASQAAPDGYTIMMGHMGTHGAAPAVYPDLKYDPRTD HHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC FAPIGLAAGTPIVVVARKDFPAKDFKEFVAKVKADSEKLNEAHAGVGSVSFTTCSLFNSL CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHH LGAKPTRVVYRGTGPALNDLVAGQVDYMCDQIVNLVPQIQAGTIKAYAVALPERSPALPD HCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCC VPTTKEGGLPEFQVTAWNAVFAPKGTPPAVVKRLSQALLASLDDAATRKRLLDLGGDLSN CCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH TAARTPEGLQKLVESEVARWNKVLKATGAAK HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SPNRMHRAAARLAVPLLAAAALAATPARAAYPERPITMIVPFAAGGPTDVVARIVAEHM CCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHH SRTLGQQVVIENVAGAGGTTGILRASQAAPDGYTIMMGHMGTHGAAPAVYPDLKYDPRTD HHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC FAPIGLAAGTPIVVVARKDFPAKDFKEFVAKVKADSEKLNEAHAGVGSVSFTTCSLFNSL CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHH LGAKPTRVVYRGTGPALNDLVAGQVDYMCDQIVNLVPQIQAGTIKAYAVALPERSPALPD HCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCC VPTTKEGGLPEFQVTAWNAVFAPKGTPPAVVKRLSQALLASLDDAATRKRLLDLGGDLSN CCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH TAARTPEGLQKLVESEVARWNKVLKATGAAK HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]