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The map label for this gene is ydaM [H]

Identifier: 220916605

GI number: 220916605

Start: 1678593

End: 1679891

Strand: Direct

Name: ydaM [H]

Synonym: A2cp1_1499

Alternate gene names: 220916605

Gene position: 1678593-1679891 (Clockwise)

Preceding gene: 220916604

Following gene: 220916606

Centisome position: 33.38

GC content: 79.21

Gene sequence:

>1299_bases
ATGGTGCAGGCGGTGGCGGCGGTGTTCGAGTGGGGCCTGTTCGCCCTCATGGCGTACACGTTCGCGGTGGCGCTGGCGGG
GTTCCTCCCGCGTCGCGCCCTCGCGCCCGCGCCGCCGCGCCACCGCTTCCTGGTGCTCGTCCCGGCCCACGACGAGGCCG
CGGTGGTGGCGCACGCGGTGCGGGCGGCGCTCCGGCAGGACCACCCCCGGCCGCTGTTCCGGGTGGTGGTGGTGGCGGAC
AACTGCTCCGACGACACCGCCGCCCGGGCCCGCGCGGCCGGCGCGGACGCGGTGCTGGAGCGGCACGACCCGCGCCACCT
CGGCAAGGGCCACGCGCTCGCCTGGGCCCGCGAGCGCGCGCTGGCCCTGTTCCCGGCCGACGCGGTGTGCGTGTTCGACG
CCGACAACGTCATGGCCCCCGGCTTCCTCTCGGCCATGGACGCCCGCCTCTCGGCCGGTGCCCGCGTCCTGCAGGGCTCC
ATCGAGGCGAAGAACCCGGACGACAGCTGGGTCACGCAGGCGAGCGCGCTCCAGCACGCGGTCGCGGCGCGCCTGTTCGA
GCGCTCGCGCGCGCGGCTCGGCTTCTCCGCCCTCCTGAACGGCACCGGCTACTGCGTGCGCACCGAGGTGCTGCGCGCCT
GGCCCCCGGATCCCGCCTGTCTCACCGACGATCGCGAGCTGCAGCTCCGGCTGCTCCGCGCCGGCGTCCGGGTGGAGTGG
GCGCCGGAGGCCGTCACCTACGACGAGAAGCCGGCCACGCTCGCCGCCTCGTGGCGCCAGCGCGTCCGCTGGGCGCGCGG
GCACCTCGACGTCGCCCGCCGGCACACGCTCCCGCTGCTCTGGCGCGCGCTCCGGCACCGCGACCTGGCCGCGCTGGACG
GCGCGGTGGCCTGCCTGCAGCCGTCGCGATCGGCGGTGGCGCTGCTCGCCGGCGCGGTGTTCGCGGCGCGGCTCGGGGGC
GCGGCGCTGGGCCACCCCGCGGGCGCCCCGCACGTCCCGCTCGCCGCGTGGCTGCCGCTGCTCGCGTGCCCGGTGGCGTT
CCCGGTGGCGGCGCTCGCCGCGGAGCGCGTGCCGGCGCGGGTGGCGCTCCGCTACGGGTACACGCTGCTCCTGCAGGCCG
CCTGGGCGCCCCTGCTGGTGGCCGGCCTGCTGCGCCGGCGGGACCGGCGCTGGGGCGCGACGCGCCACACCCGGAGCATC
TCGGTCGAGGCGCGGCTCGCGGCGGGCAACGTCGCCGCGTCGCCCGGCCCCGGCGGTGCGGCGTCGCGGCCGCGGCGGGG
CGGGGAGAGCGTGGCGTGA

Upstream 100 bases:

>100_bases
CTTGTCGCGCGCCGGGGGTGCACGCAGATCCTCCGCGAGACGGCGGCGCCGATGCGGTGAGGGGGGCGCGCGGGCGCGGG
ACGCCGTCCGGGGAGCGCGG

Downstream 100 bases:

>100_bases
GCCCTCACGGTGCGTCCGCGCGCCCCGGCCCGCGTCGCGGCGAGGGCAGCGCCCCGCGCCCGGGCTTCCGGGCGGGCGCC
CGCGTCGCGACGTTGGTGGG

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MVQAVAAVFEWGLFALMAYTFAVALAGFLPRRALAPAPPRHRFLVLVPAHDEAAVVAHAVRAALRQDHPRPLFRVVVVAD
NCSDDTAARARAAGADAVLERHDPRHLGKGHALAWARERALALFPADAVCVFDADNVMAPGFLSAMDARLSAGARVLQGS
IEAKNPDDSWVTQASALQHAVAARLFERSRARLGFSALLNGTGYCVRTEVLRAWPPDPACLTDDRELQLRLLRAGVRVEW
APEAVTYDEKPATLAASWRQRVRWARGHLDVARRHTLPLLWRALRHRDLAALDGAVACLQPSRSAVALLAGAVFAARLGG
AALGHPAGAPHVPLAAWLPLLACPVAFPVAALAAERVPARVALRYGYTLLLQAAWAPLLVAGLLRRRDRRWGATRHTRSI
SVEARLAAGNVAASPGPGGAASRPRRGGESVA

Sequences:

>Translated_432_residues
MVQAVAAVFEWGLFALMAYTFAVALAGFLPRRALAPAPPRHRFLVLVPAHDEAAVVAHAVRAALRQDHPRPLFRVVVVAD
NCSDDTAARARAAGADAVLERHDPRHLGKGHALAWARERALALFPADAVCVFDADNVMAPGFLSAMDARLSAGARVLQGS
IEAKNPDDSWVTQASALQHAVAARLFERSRARLGFSALLNGTGYCVRTEVLRAWPPDPACLTDDRELQLRLLRAGVRVEW
APEAVTYDEKPATLAASWRQRVRWARGHLDVARRHTLPLLWRALRHRDLAALDGAVACLQPSRSAVALLAGAVFAARLGG
AALGHPAGAPHVPLAAWLPLLACPVAFPVAALAAERVPARVALRYGYTLLLQAAWAPLLVAGLLRRRDRRWGATRHTRSI
SVEARLAAGNVAASPGPGGAASRPRRGGESVA
>Mature_432_residues
MVQAVAAVFEWGLFALMAYTFAVALAGFLPRRALAPAPPRHRFLVLVPAHDEAAVVAHAVRAALRQDHPRPLFRVVVVAD
NCSDDTAARARAAGADAVLERHDPRHLGKGHALAWARERALALFPADAVCVFDADNVMAPGFLSAMDARLSAGARVLQGS
IEAKNPDDSWVTQASALQHAVAARLFERSRARLGFSALLNGTGYCVRTEVLRAWPPDPACLTDDRELQLRLLRAGVRVEW
APEAVTYDEKPATLAASWRQRVRWARGHLDVARRHTLPLLWRALRHRDLAALDGAVACLQPSRSAVALLAGAVFAARLGG
AALGHPAGAPHVPLAAWLPLLACPVAFPVAALAAERVPARVALRYGYTLLLQAAWAPLLVAGLLRRRDRRWGATRHTRSI
SVEARLAAGNVAASPGPGGAASRPRRGGESVA

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 46247; Mature: 46247

Theoretical pI: Translated: 11.51; Mature: 11.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQAVAAVFEWGLFALMAYTFAVALAGFLPRRALAPAPPRHRFLVLVPAHDEAAVVAHAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHH
RAALRQDHPRPLFRVVVVADNCSDDTAARARAAGADAVLERHDPRHLGKGHALAWARERA
HHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHCCHHHHHHCCCCHHCCCCCHHHHHHHCE
LALFPADAVCVFDADNVMAPGFLSAMDARLSAGARVLQGSIEAKNPDDSWVTQASALQHA
EEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHHH
VAARLFERSRARLGFSALLNGTGYCVRTEVLRAWPPDPACLTDDRELQLRLLRAGVRVEW
HHHHHHHHHHHHCCHHHHHCCCCCEEEHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEE
APEAVTYDEKPATLAASWRQRVRWARGHLDVARRHTLPLLWRALRHRDLAALDGAVACLQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHCCC
PSRSAVALLAGAVFAARLGGAALGHPAGAPHVPLAAWLPLLACPVAFPVAALAAERVPAR
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH
VALRYGYTLLLQAAWAPLLVAGLLRRRDRRWGATRHTRSISVEARLAAGNVAASPGPGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCC
ASRPRRGGESVA
CCCCCCCCCCCC
>Mature Secondary Structure
MVQAVAAVFEWGLFALMAYTFAVALAGFLPRRALAPAPPRHRFLVLVPAHDEAAVVAHAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHH
RAALRQDHPRPLFRVVVVADNCSDDTAARARAAGADAVLERHDPRHLGKGHALAWARERA
HHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHCCHHHHHHCCCCHHCCCCCHHHHHHHCE
LALFPADAVCVFDADNVMAPGFLSAMDARLSAGARVLQGSIEAKNPDDSWVTQASALQHA
EEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHHH
VAARLFERSRARLGFSALLNGTGYCVRTEVLRAWPPDPACLTDDRELQLRLLRAGVRVEW
HHHHHHHHHHHHCCHHHHHCCCCCEEEHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEE
APEAVTYDEKPATLAASWRQRVRWARGHLDVARRHTLPLLWRALRHRDLAALDGAVACLQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHCCC
PSRSAVALLAGAVFAARLGGAALGHPAGAPHVPLAAWLPLLACPVAFPVAALAAERVPAR
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH
VALRYGYTLLLQAAWAPLLVAGLLRRRDRRWGATRHTRSISVEARLAAGNVAASPGPGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCC
ASRPRRGGESVA
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]