| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is yhfW [C]
Identifier: 220916583
GI number: 220916583
Start: 1648306
End: 1649322
Strand: Direct
Name: yhfW [C]
Synonym: A2cp1_1477
Alternate gene names: 220916583
Gene position: 1648306-1649322 (Clockwise)
Preceding gene: 220916578
Following gene: 220916588
Centisome position: 32.77
GC content: 79.35
Gene sequence:
>1017_bases GTGGGGCGCGGGGTGGCGCGTTATGATCCCGGGGTGACGACGCTGTTCGTGTTCGTGGACGGGGTGGGCGCCGGCGACCG CGACCCGGCGACGAATCCGCTCGCCCGCGGGGACTTCCTGCTCTCGCGCTTCGCGGACGGCGGCGGCGCGCCCCTGCCGC GCGGCGGCCGGGCGGCGCTGGCCGACGCCTGCCTGGGCGTGGCGGGCCGGCCGCAGTCGGCCACCGGCCAGGCCACCCTG CTCACCGGCGAGAACGCGCCGGCGCACCTCGGCCGCCACCTGCTCGGCTTCCCCAACGCGCCGCTGCGGGCGCTGCTCCA GGAGCGATCGCTGTTCCGCGCGCTCGCGGCCGCGGGGCGCCGCGGCGCGTTCGCGAACGCGTACCCCGTCGCCTACCTCC GCGCGCTCGGCCACGCGGCCGACGGCGCGCCCGAGCCCGCCCTGGCGGGCTCCCGCCGCCGGGCCCGCGCCGCCGCGACC ACGGTGGCCTACGCGGCGGGCGGCGGCCGGTTCCGGACGCTGGAGGACGCGCGCCGCGGGGAGGGGCTCACCCACGATCT CACCGGGGAGCGCGCGCGCGGCCTCGGGGTGTCGCTGCCCCGGCGCGCGCCGGAGGAGGCGGCGGAGATCCTGCTGCGCC TCGCTGCCGGCCACGATCTCGCGCTGTTCGAGTTCTTCGAGACCGACGAGGCGGGCCACGCCCGCTCGATGGAGCGCGCG CTGGACGCGCTCGGGCGGCTGGACGCGTTCCTGCGGGCGCTGGTGGACGGGCTCGGGCCGGAGGACGCGCTGGTGGTGAC GAGCGACCACGGCAACCTGGAGGACCTCTCGCTGCGCAACCACACCCTGGCGCCGGTACCGCTGCTCGGCTTCGGGCGCG CCGCCGCGGAGGTGGAGCAGGTGAGGGACCTCACCGGCGTGGCGCCGCTGCTGCTCCGGCTGGCGGGCGCGGACGCCCCC GCGGGCGGTCAGCCGCGGCGGACCACGCTCGCCACCAGCCAGAGCCGGTCGCCGTAG
Upstream 100 bases:
>100_bases GGGCATGGTGCGCGCGCTCGGGGGTCCGGAAGGCGGCCGGAGGATAGCGCCGGAGCGACTCCGCGTCTCGGGGGGCGGCG GGGCGTCCGGAGCGCGGCGG
Downstream 100 bases:
>100_bases GCCCGCTCCGCGCACATCCACACCCGCGCCGGCTCGCCGCCGACCTCCAGCGCGGCCCCGGACTCCGGGCCCCAGATCCA CTCGCGCGCCTCGCCGCCGC
Product: metalloenzyme domain-containing protein
Products: NA
Alternate protein names: Metallo Domain Protein; Metallo; Metallo Superfamily Protein
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MGRGVARYDPGVTTLFVFVDGVGAGDRDPATNPLARGDFLLSRFADGGGAPLPRGGRAALADACLGVAGRPQSATGQATL LTGENAPAHLGRHLLGFPNAPLRALLQERSLFRALAAAGRRGAFANAYPVAYLRALGHAADGAPEPALAGSRRRARAAAT TVAYAAGGGRFRTLEDARRGEGLTHDLTGERARGLGVSLPRRAPEEAAEILLRLAAGHDLALFEFFETDEAGHARSMERA LDALGRLDAFLRALVDGLGPEDALVVTSDHGNLEDLSLRNHTLAPVPLLGFGRAAAEVEQVRDLTGVAPLLLRLAGADAP AGGQPRRTTLATSQSRSP
Sequences:
>Translated_338_residues MGRGVARYDPGVTTLFVFVDGVGAGDRDPATNPLARGDFLLSRFADGGGAPLPRGGRAALADACLGVAGRPQSATGQATL LTGENAPAHLGRHLLGFPNAPLRALLQERSLFRALAAAGRRGAFANAYPVAYLRALGHAADGAPEPALAGSRRRARAAAT TVAYAAGGGRFRTLEDARRGEGLTHDLTGERARGLGVSLPRRAPEEAAEILLRLAAGHDLALFEFFETDEAGHARSMERA LDALGRLDAFLRALVDGLGPEDALVVTSDHGNLEDLSLRNHTLAPVPLLGFGRAAAEVEQVRDLTGVAPLLLRLAGADAP AGGQPRRTTLATSQSRSP >Mature_337_residues GRGVARYDPGVTTLFVFVDGVGAGDRDPATNPLARGDFLLSRFADGGGAPLPRGGRAALADACLGVAGRPQSATGQATLL TGENAPAHLGRHLLGFPNAPLRALLQERSLFRALAAAGRRGAFANAYPVAYLRALGHAADGAPEPALAGSRRRARAAATT VAYAAGGGRFRTLEDARRGEGLTHDLTGERARGLGVSLPRRAPEEAAEILLRLAAGHDLALFEFFETDEAGHARSMERAL DALGRLDAFLRALVDGLGPEDALVVTSDHGNLEDLSLRNHTLAPVPLLGFGRAAAEVEQVRDLTGVAPLLLRLAGADAPA GGQPRRTTLATSQSRSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35081; Mature: 34950
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: PS00104 EPSP_SYNTHASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRGVARYDPGVTTLFVFVDGVGAGDRDPATNPLARGDFLLSRFADGGGAPLPRGGRAAL CCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHH ADACLGVAGRPQSATGQATLLTGENAPAHLGRHLLGFPNAPLRALLQERSLFRALAAAGR HHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC RGAFANAYPVAYLRALGHAADGAPEPALAGSRRRARAAATTVAYAAGGGRFRTLEDARRG CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCHHHHHHC EGLTHDLTGERARGLGVSLPRRAPEEAAEILLRLAAGHDLALFEFFETDEAGHARSMERA CCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHCCCCCHHHHHHHH LDALGRLDAFLRALVDGLGPEDALVVTSDHGNLEDLSLRNHTLAPVPLLGFGRAAAEVEQ HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHH VRDLTGVAPLLLRLAGADAPAGGQPRRTTLATSQSRSP HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCC >Mature Secondary Structure GRGVARYDPGVTTLFVFVDGVGAGDRDPATNPLARGDFLLSRFADGGGAPLPRGGRAAL CCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHH ADACLGVAGRPQSATGQATLLTGENAPAHLGRHLLGFPNAPLRALLQERSLFRALAAAGR HHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC RGAFANAYPVAYLRALGHAADGAPEPALAGSRRRARAAATTVAYAAGGGRFRTLEDARRG CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCHHHHHHC EGLTHDLTGERARGLGVSLPRRAPEEAAEILLRLAAGHDLALFEFFETDEAGHARSMERA CCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHCCCCCHHHHHHHH LDALGRLDAFLRALVDGLGPEDALVVTSDHGNLEDLSLRNHTLAPVPLLGFGRAAAEVEQ HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHH VRDLTGVAPLLLRLAGADAPAGGQPRRTTLATSQSRSP HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA