| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220916410
Identifier: 220916410
GI number: 220916410
Start: 1453358
End: 1454140
Strand: Direct
Name: 220916410
Synonym: A2cp1_1304
Alternate gene names: NA
Gene position: 1453358-1454140 (Clockwise)
Preceding gene: 220916409
Following gene: 220916411
Centisome position: 28.9
GC content: 70.75
Gene sequence:
>783_bases ATGAAGATCAACCGGAGTGACCTGAGCGCTGCCTTCCCGTGGATGGCCGATCCCCGGGTCGCGGCTCGGCTGTCGACGCT GTCCAGGGTCGACGCCAGGGTCGACAAGAAGGCCGAGGTCGTGGACGTCTACCTCTACGACGTCATCGTGACGCCCGAAA TCGAGGCGCTGTTCGGCGTCGGCATCTCCGCCCAGGGCTTCCGCGAGCAGCTCAAGCAGGCCGACGGCGCCCGCCGAGTG AACGTACACATCAACTCCCCGGGCGGCGACGTTGACCAGGGGAAGGCGATGCTCAGCGGCCTCCGGTCGCTGCGCGCGGG TGAGAAGGTGGCCGTGGTCGAGGGCCTGGCGGCCTCCGCCGCGACGGTCGTGGCCATGGGCGCCGACCGCGTCGTGATGG AGCCCGAGGCCGTCTTCATGATCCACGAGGCGAGCGGCGGGATGTGGGGCTCGGCCGCCGACCACGAGAAGTTTGCCGAG ATCCTCCGGATGGACAACGCGGCCGTCCGTGCCCTTTACGCCAAGAAGACGGGCCTCGACGACGGCCGAATCGCGGAGCT GATGGCCGCCCAGGAGCCGGGCGGCACCGTCCCGGGCACGTACATGGACGCGGCCCGTGCCAGGGAGCTCGGCTTCGCGG ATGAGGTCCTCGCCCCACCGACCAAGGAGGCCGCCGCGGCGTTCAGGGCGACCGCCTCCGTCGCCACCCCGAACCAGATC GCCGTGAAGCTGGCCTTCGCCCGCTCACGGCAGCAGCACCCGCCGGCGGACCGCCGCGGCTAA
Upstream 100 bases:
>100_bases AACGACATCGGCCCGGCCGGTGACGTGCACCAGGTCCGCGCCGCGCCGACCTCTCCGCCCGCCGCTGGCGACAGGGCCGA CGGACCGGAGGAGGAGACCG
Downstream 100 bases:
>100_bases CCACAAGCAAGGAGCAGGAAGCATGGACATCATCGCAACGCTCCGCAGCCGCCAGAACGAGATCGAGGCGCGCCTGTCGG AGTTCACAAAGCAGCTCACG
Product: peptidase S14 ClpP
Products: NA
Alternate protein names: ATP-Dependent Clp Protease Proteolytic Subunit; ATP-Dependent Protease; ClpP Protease Family Protein; Protease Subunit Of ATP-Dependent Clp Protease; ATP Dependent Clp Protease; Phage-Related Clp Protease; Clp Protease; Clp-Like Protease; ATP-Dependent Clp Protease Proteolytic Subunit Of Prophage; Protease/Scaffold Protein; Clp Protease-Like Protein; Phage Portal Protein Lambda Family; Protease Subunit Of ATP-Dependent Clp Proteases; Peptidase S; ATP-Dependent Clp Protease Proteolytic Subunit ClpP; Phage Related Protease; Prophage Clp Protease-Like Protein
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MKINRSDLSAAFPWMADPRVAARLSTLSRVDARVDKKAEVVDVYLYDVIVTPEIEALFGVGISAQGFREQLKQADGARRV NVHINSPGGDVDQGKAMLSGLRSLRAGEKVAVVEGLAASAATVVAMGADRVVMEPEAVFMIHEASGGMWGSAADHEKFAE ILRMDNAAVRALYAKKTGLDDGRIAELMAAQEPGGTVPGTYMDAARARELGFADEVLAPPTKEAAAAFRATASVATPNQI AVKLAFARSRQQHPPADRRG
Sequences:
>Translated_260_residues MKINRSDLSAAFPWMADPRVAARLSTLSRVDARVDKKAEVVDVYLYDVIVTPEIEALFGVGISAQGFREQLKQADGARRV NVHINSPGGDVDQGKAMLSGLRSLRAGEKVAVVEGLAASAATVVAMGADRVVMEPEAVFMIHEASGGMWGSAADHEKFAE ILRMDNAAVRALYAKKTGLDDGRIAELMAAQEPGGTVPGTYMDAARARELGFADEVLAPPTKEAAAAFRATASVATPNQI AVKLAFARSRQQHPPADRRG >Mature_260_residues MKINRSDLSAAFPWMADPRVAARLSTLSRVDARVDKKAEVVDVYLYDVIVTPEIEALFGVGISAQGFREQLKQADGARRV NVHINSPGGDVDQGKAMLSGLRSLRAGEKVAVVEGLAASAATVVAMGADRVVMEPEAVFMIHEASGGMWGSAADHEKFAE ILRMDNAAVRALYAKKTGLDDGRIAELMAAQEPGGTVPGTYMDAARARELGFADEVLAPPTKEAAAAFRATASVATPNQI AVKLAFARSRQQHPPADRRG
Specific function: Unknown
COG id: COG0740
COG function: function code OU; Protease subunit of ATP-dependent Clp proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27627; Mature: 27627
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINRSDLSAAFPWMADPRVAARLSTLSRVDARVDKKAEVVDVYLYDVIVTPEIEALFGV CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEEEEEEEEECCCHHHHHCC GISAQGFREQLKQADGARRVNVHINSPGGDVDQGKAMLSGLRSLRAGEKVAVVEGLAASA CCCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHH ATVVAMGADRVVMEPEAVFMIHEASGGMWGSAADHEKFAEILRMDNAAVRALYAKKTGLD HEEEEECCCEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCC DGRIAELMAAQEPGGTVPGTYMDAARARELGFADEVLAPPTKEAAAAFRATASVATPNQI CCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCCCHH AVKLAFARSRQQHPPADRRG EEEEHHHHHHCCCCCCCCCC >Mature Secondary Structure MKINRSDLSAAFPWMADPRVAARLSTLSRVDARVDKKAEVVDVYLYDVIVTPEIEALFGV CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEEEEEEEEECCCHHHHHCC GISAQGFREQLKQADGARRVNVHINSPGGDVDQGKAMLSGLRSLRAGEKVAVVEGLAASA CCCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHH ATVVAMGADRVVMEPEAVFMIHEASGGMWGSAADHEKFAEILRMDNAAVRALYAKKTGLD HEEEEECCCEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCC DGRIAELMAAQEPGGTVPGTYMDAARARELGFADEVLAPPTKEAAAAFRATASVATPNQI CCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCCCHH AVKLAFARSRQQHPPADRRG EEEEHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA