| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220916268
Identifier: 220916268
GI number: 220916268
Start: 1301167
End: 1301949
Strand: Reverse
Name: 220916268
Synonym: A2cp1_1161
Alternate gene names: NA
Gene position: 1301949-1301167 (Counterclockwise)
Preceding gene: 220916270
Following gene: 220916258
Centisome position: 25.89
GC content: 63.35
Gene sequence:
>783_bases ATGGGGACTCCCGAGTTCGACGACCGGTTTGTTCGCCACTACCTCAGGCACGTCGTCGCGCTCAACGTCGAGTGCGACAT GCCGGACGGCACGCGCGGAAGGGATGTATACTCCTGCTTCGTGCTCGAGATGTGGGGAGAGTGGTTCCTCGCGACCTCGG GGCACGGGTTGGAGAAGTTGCGCTCCGGCCTACCCAGGCTTCCGAACGTCGCTTGCAGTCTCTTCGACGCATGGCATCCC GGAGCGAGCCGGTTTCCGATCCCGTTCCCCCTGCTCGATGCCAGGACCTTCGCCGTAGACTTCGACGGGCTCGATCTCGG GCTTATCCTCCTCGACGAGCTGTTCCGACGCGGGCTCCAGGCGAACGGGATCGTGCCCTTCGTCGAGAGTACTTGGCGAA AGCCTCCAGCGAACATGCGGCTCCACGCCGTCATCGGGTTCCCCGAGCAATTCATCACACGCGGGCCCGACGCAACGGCC GTGCTCCCGACGTTCGTCTACATGAACGCAGTTGAAGCCCCGCCGGTTATGGCAAAGGCGTTCCCCCGCTTCTACGGCAA GCTCCCCCCGCAGTTGGTGAATCCCCATACCGGCGCGACGCTCACCGACATGGATGGGTTCAGTGGATCCCCGATCATCG GCTTCAATGTGAAGGACGACGGCCAGGTCTCTTACTTTCTCGTCGCGATTCAGAGCGGGTGGCGCTCCGACCTGTGCGTC GTTGCAGGCCCACTCCTGCCCGCGATCGCGGACTGGCTTGCGAAGCAGATCGAGCAGGTGTAA
Upstream 100 bases:
>100_bases TCCATGCCGGAACGTTACCAGAAGGCCCCCACGCGCCAGCCCGGCGCAGTAGCATCCCCAACGCGTCGCCTCCTCGGCGA TGGCCGCGCAGGAGGCGATG
Downstream 100 bases:
>100_bases CCGTTCGACGCCGCGTCGTTGCAGCCGCTGACCCCCATCCTTCGGCCAACCGGACGTCACCGACCACGGCAGGCCAAGAA GCTGGTCGACGAAGCCGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MGTPEFDDRFVRHYLRHVVALNVECDMPDGTRGRDVYSCFVLEMWGEWFLATSGHGLEKLRSGLPRLPNVACSLFDAWHP GASRFPIPFPLLDARTFAVDFDGLDLGLILLDELFRRGLQANGIVPFVESTWRKPPANMRLHAVIGFPEQFITRGPDATA VLPTFVYMNAVEAPPVMAKAFPRFYGKLPPQLVNPHTGATLTDMDGFSGSPIIGFNVKDDGQVSYFLVAIQSGWRSDLCV VAGPLLPAIADWLAKQIEQV
Sequences:
>Translated_260_residues MGTPEFDDRFVRHYLRHVVALNVECDMPDGTRGRDVYSCFVLEMWGEWFLATSGHGLEKLRSGLPRLPNVACSLFDAWHP GASRFPIPFPLLDARTFAVDFDGLDLGLILLDELFRRGLQANGIVPFVESTWRKPPANMRLHAVIGFPEQFITRGPDATA VLPTFVYMNAVEAPPVMAKAFPRFYGKLPPQLVNPHTGATLTDMDGFSGSPIIGFNVKDDGQVSYFLVAIQSGWRSDLCV VAGPLLPAIADWLAKQIEQV >Mature_259_residues GTPEFDDRFVRHYLRHVVALNVECDMPDGTRGRDVYSCFVLEMWGEWFLATSGHGLEKLRSGLPRLPNVACSLFDAWHPG ASRFPIPFPLLDARTFAVDFDGLDLGLILLDELFRRGLQANGIVPFVESTWRKPPANMRLHAVIGFPEQFITRGPDATAV LPTFVYMNAVEAPPVMAKAFPRFYGKLPPQLVNPHTGATLTDMDGFSGSPIIGFNVKDDGQVSYFLVAIQSGWRSDLCVV AGPLLPAIADWLAKQIEQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28832; Mature: 28700
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTPEFDDRFVRHYLRHVVALNVECDMPDGTRGRDVYSCFVLEMWGEWFLATSGHGLEKL CCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHEEEECCCCCHHHH RSGLPRLPNVACSLFDAWHPGASRFPIPFPLLDARTFAVDFDGLDLGLILLDELFRRGLQ HCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCC ANGIVPFVESTWRKPPANMRLHAVIGFPEQFITRGPDATAVLPTFVYMNAVEAPPVMAKA CCCCCCCHHHHCCCCCCCCEEEEEECCCHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHH FPRFYGKLPPQLVNPHTGATLTDMDGFSGSPIIGFNVKDDGQVSYFLVAIQSGWRSDLCV HHHHHCCCCHHHCCCCCCCEEEECCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCHHH VAGPLLPAIADWLAKQIEQV HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GTPEFDDRFVRHYLRHVVALNVECDMPDGTRGRDVYSCFVLEMWGEWFLATSGHGLEKL CCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHEEEECCCCCHHHH RSGLPRLPNVACSLFDAWHPGASRFPIPFPLLDARTFAVDFDGLDLGLILLDELFRRGLQ HCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCC ANGIVPFVESTWRKPPANMRLHAVIGFPEQFITRGPDATAVLPTFVYMNAVEAPPVMAKA CCCCCCCHHHHCCCCCCCCEEEEEECCCHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHH FPRFYGKLPPQLVNPHTGATLTDMDGFSGSPIIGFNVKDDGQVSYFLVAIQSGWRSDLCV HHHHHCCCCHHHCCCCCCCEEEECCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCHHH VAGPLLPAIADWLAKQIEQV HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA