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The map label for this gene is ythA [H]

Identifier: 220916110

GI number: 220916110

Start: 1121400

End: 1122746

Strand: Direct

Name: ythA [H]

Synonym: A2cp1_0997

Alternate gene names: 220916110

Gene position: 1121400-1122746 (Clockwise)

Preceding gene: 220916108

Following gene: 220916111

Centisome position: 22.3

GC content: 73.72

Gene sequence:

>1347_bases
GTGACCGACCTCCTCGCCGCCCGCGCGCTCTTCGGCGTCTCGCTCGCCTTCCACATCGTCTTCGCCGCCGTCGGCGTGGC
CATGCCGCTGTTCATGGTCCTGGCCGAATGGCGCTGGCGCCGCACCGGCTCGGAGGTGCACCTGGAGCTGGCGCGCCGGT
GGGCGAAGGGCACCGCCATCCTGTTCGCGGTGGGCGCCGTCTCCGGCACGGTCATCTCGTTCGAGCTGGGGCTGCTCTGG
CCGCGCTTCATGCAGTTCGCGGGTCCCATCATCGGCATGCCGTTCTCGCTGGAGGGCTTCGCGTTCTTCGCGGAGGCGAT
CTTCCTCGGCATCTACCTGTACGGCTGGGGCCGCGTCGGCCCGCGCCTGCACCTCGCCGCCGGGTGGGTGGTCGCGGCGA
GCGGCGCCACCTCCGCGTTCTTCGTGACGCTCGCGAACGTCTGGATGAACGTGCCGGCCGGCTTCGAGCTGGGCGCCGGC
GGGGTGGCGGCCGGCGCCGCCGCCATCGACCCGTTCGTCGCGATGTTCCCGCCCGGCTGGCAGCACCAGGTCATCCACGT
CCTCATCTCGTGCTACGCGGCGACCGGCTTCGCGGTGGCGGGCATCCACGCGTTCATGCTCCTGCGCGAGCGGGACAACC
CGTTCCACCGCGCCGCGCTCCGCATCGCGTTCGGCGTGGGCGCGCTCGCGGCGCTGCTGCAGCCGCTCTCGGGCGACTTC
TCCGCGCGCCAGATCGCGACCACGCAGCCGGTGAAGCTCGCCGCGCTGGAGGGTCACTTCCGGACCGAGCGCGGCGCGCC
GCTGCGCATCGGCGGCATCCCCGACGAGGAGCGGCGCGAGACGCGCTACGCGCTGGAGATCCCGTACGGCCTCTCGCTGC
TCGCGTTCCACGACCCGCAGGCCGAGGTGCGCGGCCTGGAGGCGTTCCCGCGCGACCGCTGGCCCAACACGCTGCTCGTG
CACCTCGCCTTCCAGGTGATGGTCGGGCTGGGCTCGATCATGGCGCTGCTCGCCGCGGCCTGGGCGGTGCGCCGGGTGCG
CCGCCGCGAGCCGGGGCGCTGGCTGCTGCGGGCGCTGGTCGTGGCGTCCCCGTTCGGCTTCGTGGCGCTCGAGGCGGGCT
GGCTCGTGACGGAGTGGGGCCGCCAGCCGTTCACGGTGTGGGGCGTGCTGCGCACCGCCGACTCGGTGACGCCGGTGACG
AACCTCGCGATCCCGTTCATCGGCTTCATGGTGCTCTACGTGTTCCTCGCCGTGGTGGTGGTGGCGCTGCTCTGGCGCCA
GATCGCGAAGAGCCCGCGCGCCGTCGCCCTCGGCCCCGGCGCCGGCACCGCGGAGGTGCGGCCGTGA

Upstream 100 bases:

>100_bases
GCGTGCACCGGAAACCGCGGCGCGCCGGGCGCAAGCGACACGCTGCCGCACCCGGAGAGGCCGGGCGAACAGCCGTCCGG
GTGGGCAAGTATCGGCCGCC

Downstream 100 bases:

>100_bases
CGCCGGCCGACCTGCTGGGCGGGGTGATCCTCGTCGCCGCGGTCCTGTACGCGCTGCTCGGCGGGGCGGACTTCGGCGCC
GGCATCTGGGACCTGCTCGC

Product: cytochrome bd ubiquinol oxidase subunit I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MTDLLAARALFGVSLAFHIVFAAVGVAMPLFMVLAEWRWRRTGSEVHLELARRWAKGTAILFAVGAVSGTVISFELGLLW
PRFMQFAGPIIGMPFSLEGFAFFAEAIFLGIYLYGWGRVGPRLHLAAGWVVAASGATSAFFVTLANVWMNVPAGFELGAG
GVAAGAAAIDPFVAMFPPGWQHQVIHVLISCYAATGFAVAGIHAFMLLRERDNPFHRAALRIAFGVGALAALLQPLSGDF
SARQIATTQPVKLAALEGHFRTERGAPLRIGGIPDEERRETRYALEIPYGLSLLAFHDPQAEVRGLEAFPRDRWPNTLLV
HLAFQVMVGLGSIMALLAAAWAVRRVRRREPGRWLLRALVVASPFGFVALEAGWLVTEWGRQPFTVWGVLRTADSVTPVT
NLAIPFIGFMVLYVFLAVVVVALLWRQIAKSPRAVALGPGAGTAEVRP

Sequences:

>Translated_448_residues
MTDLLAARALFGVSLAFHIVFAAVGVAMPLFMVLAEWRWRRTGSEVHLELARRWAKGTAILFAVGAVSGTVISFELGLLW
PRFMQFAGPIIGMPFSLEGFAFFAEAIFLGIYLYGWGRVGPRLHLAAGWVVAASGATSAFFVTLANVWMNVPAGFELGAG
GVAAGAAAIDPFVAMFPPGWQHQVIHVLISCYAATGFAVAGIHAFMLLRERDNPFHRAALRIAFGVGALAALLQPLSGDF
SARQIATTQPVKLAALEGHFRTERGAPLRIGGIPDEERRETRYALEIPYGLSLLAFHDPQAEVRGLEAFPRDRWPNTLLV
HLAFQVMVGLGSIMALLAAAWAVRRVRRREPGRWLLRALVVASPFGFVALEAGWLVTEWGRQPFTVWGVLRTADSVTPVT
NLAIPFIGFMVLYVFLAVVVVALLWRQIAKSPRAVALGPGAGTAEVRP
>Mature_447_residues
TDLLAARALFGVSLAFHIVFAAVGVAMPLFMVLAEWRWRRTGSEVHLELARRWAKGTAILFAVGAVSGTVISFELGLLWP
RFMQFAGPIIGMPFSLEGFAFFAEAIFLGIYLYGWGRVGPRLHLAAGWVVAASGATSAFFVTLANVWMNVPAGFELGAGG
VAAGAAAIDPFVAMFPPGWQHQVIHVLISCYAATGFAVAGIHAFMLLRERDNPFHRAALRIAFGVGALAALLQPLSGDFS
ARQIATTQPVKLAALEGHFRTERGAPLRIGGIPDEERRETRYALEIPYGLSLLAFHDPQAEVRGLEAFPRDRWPNTLLVH
LAFQVMVGLGSIMALLAAAWAVRRVRRREPGRWLLRALVVASPFGFVALEAGWLVTEWGRQPFTVWGVLRTADSVTPVTN
LAIPFIGFMVLYVFLAVVVVALLWRQIAKSPRAVALGPGAGTAEVRP

Specific function: Probable cytochrome [H]

COG id: COG1271

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome ubiquinol oxidase subunit 1 family [H]

Homologues:

Organism=Escherichia coli, GI87081779, Length=310, Percent_Identity=28.7096774193548, Blast_Score=155, Evalue=4e-39,
Organism=Escherichia coli, GI1787212, Length=313, Percent_Identity=30.3514376996805, Blast_Score=153, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002585 [H]

Pfam domain/function: PF01654 Bac_Ubq_Cox [H]

EC number: 1.10.3.-

Molecular weight: Translated: 48602; Mature: 48470

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLLAARALFGVSLAFHIVFAAVGVAMPLFMVLAEWRWRRTGSEVHLELARRWAKGTAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEE
LFAVGAVSGTVISFELGLLWPRFMQFAGPIIGMPFSLEGFAFFAEAIFLGIYLYGWGRVG
EEEECCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
PRLHLAAGWVVAASGATSAFFVTLANVWMNVPAGFELGAGGVAAGAAAIDPFVAMFPPGW
CEEEEEECEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHCCHHHHCCCCC
QHQVIHVLISCYAATGFAVAGIHAFMLLRERDNPFHRAALRIAFGVGALAALLQPLSGDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
SARQIATTQPVKLAALEGHFRTERGAPLRIGGIPDEERRETRYALEIPYGLSLLAFHDPQ
CCCEECCCCCEEEEEECCCCCCCCCCCEEECCCCCHHHHCCEEEEECCCCCEEEEECCCH
AEVRGLEAFPRDRWPNTLLVHLAFQVMVGLGSIMALLAAAWAVRRVRRREPGRWLLRALV
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VASPFGFVALEAGWLVTEWGRQPFTVWGVLRTADSVTPVTNLAIPFIGFMVLYVFLAVVV
HHCCCCCEEEECCEEEECCCCCCEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VALLWRQIAKSPRAVALGPGAGTAEVRP
HHHHHHHHHCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure 
TDLLAARALFGVSLAFHIVFAAVGVAMPLFMVLAEWRWRRTGSEVHLELARRWAKGTAI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEE
LFAVGAVSGTVISFELGLLWPRFMQFAGPIIGMPFSLEGFAFFAEAIFLGIYLYGWGRVG
EEEECCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
PRLHLAAGWVVAASGATSAFFVTLANVWMNVPAGFELGAGGVAAGAAAIDPFVAMFPPGW
CEEEEEECEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHCCHHHHCCCCC
QHQVIHVLISCYAATGFAVAGIHAFMLLRERDNPFHRAALRIAFGVGALAALLQPLSGDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
SARQIATTQPVKLAALEGHFRTERGAPLRIGGIPDEERRETRYALEIPYGLSLLAFHDPQ
CCCEECCCCCEEEEEECCCCCCCCCCCEEECCCCCHHHHCCEEEEECCCCCEEEEECCCH
AEVRGLEAFPRDRWPNTLLVHLAFQVMVGLGSIMALLAAAWAVRRVRRREPGRWLLRALV
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VASPFGFVALEAGWLVTEWGRQPFTVWGVLRTADSVTPVTNLAIPFIGFMVLYVFLAVVV
HHCCCCCEEEECCEEEECCCCCCEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VALLWRQIAKSPRAVALGPGAGTAEVRP
HHHHHHHHHCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]