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The map label for this gene is yjbQ [C]

Identifier: 220916096

GI number: 220916096

Start: 1110362

End: 1110781

Strand: Reverse

Name: yjbQ [C]

Synonym: A2cp1_0983

Alternate gene names: 220916096

Gene position: 1110781-1110362 (Counterclockwise)

Preceding gene: 220916097

Following gene: 220916095

Centisome position: 22.09

GC content: 75.71

Gene sequence:

>420_bases
ATGTGCCCGATGCGCCTTCCCGATCTCGAGGTCGAGACCCACGCCGCGCGCGAGCTGGTGGAGATCACCGCCGAGGTGCG
CCGCGCCGTCGCCGCCGCCGGCCTGCGCGAGGGGCTGCTGCTCGTCTACTGCCCGCACACCACCGCCGGGATCACCATCC
AGGAGAACGCCGACCCCGACGTGCGGCGCGACCTCCTGCTCGCGCTCGAGAACGCGATCCCGGACGCGCCGGCGCGCGGG
CGCTACCGGCACGCGGAGGGCAACAGCCCCGCGCACGCGATGGCCTCGCTGCTCGGGTCCTCCGCCACGGTGATCGTGCG
CGACGGCGCGCCGCTGCTCGGCACCTGGCAGGGCGTGTTCCTGTGCGAGCTCGACGGCCCGCGCCGGCGCACGGTGCACC
TGCAGGCGGTGGCCCCGTGA

Upstream 100 bases:

>100_bases
GCCTGGCCCGGATGGCAGACCGGCTGTGACGCTCGCGGCTGCGCCCCTGCGGGCGCGCGGCGCGCGGCGGCGGTTCCCGA
TTCCAGATCGGCCGTCTAGT

Downstream 100 bases:

>100_bases
TGCGCCGCCTCGCCGTCTGCGCGCTGGCGCTGTCGGCGGCCTGCGCGGGCGCGCGGCGCGCGCCGCCGTCGGCCGCGCAG
GTCGCGTTCGCGCCGGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MCPMRLPDLEVETHAARELVEITAEVRRAVAAAGLREGLLLVYCPHTTAGITIQENADPDVRRDLLLALENAIPDAPARG
RYRHAEGNSPAHAMASLLGSSATVIVRDGAPLLGTWQGVFLCELDGPRRRTVHLQAVAP

Sequences:

>Translated_139_residues
MCPMRLPDLEVETHAARELVEITAEVRRAVAAAGLREGLLLVYCPHTTAGITIQENADPDVRRDLLLALENAIPDAPARG
RYRHAEGNSPAHAMASLLGSSATVIVRDGAPLLGTWQGVFLCELDGPRRRTVHLQAVAP
>Mature_139_residues
MCPMRLPDLEVETHAARELVEITAEVRRAVAAAGLREGLLLVYCPHTTAGITIQENADPDVRRDLLLALENAIPDAPARG
RYRHAEGNSPAHAMASLLGSSATVIVRDGAPLLGTWQGVFLCELDGPRRRTVHLQAVAP

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=100, Percent_Identity=39, Blast_Score=65, Evalue=1e-12,
Organism=Drosophila melanogaster, GI221476594, Length=106, Percent_Identity=41.5094339622642, Blast_Score=74, Evalue=3e-14,
Organism=Drosophila melanogaster, GI221476589, Length=106, Percent_Identity=41.5094339622642, Blast_Score=74, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 14961; Mature: 14961

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCPMRLPDLEVETHAARELVEITAEVRRAVAAAGLREGLLLVYCPHTTAGITIQENADPD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCH
VRRDLLLALENAIPDAPARGRYRHAEGNSPAHAMASLLGSSATVIVRDGAPLLGTWQGVF
HHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCEEEEECCCCCEECCCEEE
LCELDGPRRRTVHLQAVAP
EEECCCCCCEEEEEEEECC
>Mature Secondary Structure
MCPMRLPDLEVETHAARELVEITAEVRRAVAAAGLREGLLLVYCPHTTAGITIQENADPD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCH
VRRDLLLALENAIPDAPARGRYRHAEGNSPAHAMASLLGSSATVIVRDGAPLLGTWQGVF
HHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCEEEEECCCCCEECCCEEE
LCELDGPRRRTVHLQAVAP
EEECCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]