| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220916083
Identifier: 220916083
GI number: 220916083
Start: 1093061
End: 1093582
Strand: Reverse
Name: 220916083
Synonym: A2cp1_0970
Alternate gene names: NA
Gene position: 1093582-1093061 (Counterclockwise)
Preceding gene: 220916084
Following gene: 220916082
Centisome position: 21.74
GC content: 72.22
Gene sequence:
>522_bases ATGACGACCGCTGATGTCCGACGCGGAGGGACGCCCGTCTATCTCACGCTGCGAATGAAGCCGCCCTGGGTCTTCATCGA CGAGATCCGCCGGTTCGTCGAGTCGTTCTGCGCGTGCGCCGGGACCACCGACAACCGCGAGGCGCAGCTCGCCCTGGCGG TGCACGAGCTGATGCAGAACGCCGTGCCCAACTCGCACGACGACGACGTCGAGCTCACGCTCGAGGTCGAGCCCGAGGCC GACCGCGTGGCCGTGGCGGTGACCAACCGCTGCACCGAGGCCGAGTACCACGCGCTCGAGGAGCGGGTCGCGCGCATGAA CGGCGAGCCCGACGCCCTCCGCCACTACCTGCAGGCGATGCACGACACGCCCACGGCGCAGCGCGGAGGGCTCGGCCTCG CCCGCGTCCGCTTCGAGGCGCAGCTCGAGCTGTCCGTGAGCCGCGCCGGCGGGCGCATGACCGTCCACGCGTCGGGGCGG CTCCGCCCCGCCCCGCTCCAGACCTCCGGAGGTTCCCGATGA
Upstream 100 bases:
>100_bases GCATCCGCGCCGCAGGCGCTCGGGACCGTGTTCTCGGCGGTCGAGGCGTTCGCCGCCTCGCAGGAAGACGACATGACAAC CGTGGTGCTGAGGCGCAAGA
Downstream 100 bases:
>100_bases CCGTACCGTTCCAGCCCGGCGGCCGCGCCACGCCGTTCCAGGTGTCCGAGGAGAAGTACTCCGCCAGCGTGGCCAGCGAG CCGCTCGGGACCCGGGTGCT
Product: anti-sigma regulatory factor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MTTADVRRGGTPVYLTLRMKPPWVFIDEIRRFVESFCACAGTTDNREAQLALAVHELMQNAVPNSHDDDVELTLEVEPEA DRVAVAVTNRCTEAEYHALEERVARMNGEPDALRHYLQAMHDTPTAQRGGLGLARVRFEAQLELSVSRAGGRMTVHASGR LRPAPLQTSGGSR
Sequences:
>Translated_173_residues MTTADVRRGGTPVYLTLRMKPPWVFIDEIRRFVESFCACAGTTDNREAQLALAVHELMQNAVPNSHDDDVELTLEVEPEA DRVAVAVTNRCTEAEYHALEERVARMNGEPDALRHYLQAMHDTPTAQRGGLGLARVRFEAQLELSVSRAGGRMTVHASGR LRPAPLQTSGGSR >Mature_172_residues TTADVRRGGTPVYLTLRMKPPWVFIDEIRRFVESFCACAGTTDNREAQLALAVHELMQNAVPNSHDDDVELTLEVEPEAD RVAVAVTNRCTEAEYHALEERVARMNGEPDALRHYLQAMHDTPTAQRGGLGLARVRFEAQLELSVSRAGGRMTVHASGRL RPAPLQTSGGSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19109; Mature: 18978
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTADVRRGGTPVYLTLRMKPPWVFIDEIRRFVESFCACAGTTDNREAQLALAVHELMQN CCCCCCCCCCCCEEEEEEECCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH AVPNSHDDDVELTLEVEPEADRVAVAVTNRCTEAEYHALEERVARMNGEPDALRHYLQAM HCCCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH HDTPTAQRGGLGLARVRFEAQLELSVSRAGGRMTVHASGRLRPAPLQTSGGSR HCCCCCCCCCCCEEEEEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure TTADVRRGGTPVYLTLRMKPPWVFIDEIRRFVESFCACAGTTDNREAQLALAVHELMQN CCCCCCCCCCCEEEEEEECCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH AVPNSHDDDVELTLEVEPEADRVAVAVTNRCTEAEYHALEERVARMNGEPDALRHYLQAM HCCCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH HDTPTAQRGGLGLARVRFEAQLELSVSRAGGRMTVHASGRLRPAPLQTSGGSR HCCCCCCCCCCCEEEEEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA