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The map label for this gene is ybbK [C]

Identifier: 220916045

GI number: 220916045

Start: 1049981

End: 1050991

Strand: Direct

Name: ybbK [C]

Synonym: A2cp1_0932

Alternate gene names: 220916045

Gene position: 1049981-1050991 (Clockwise)

Preceding gene: 220916044

Following gene: 220916046

Centisome position: 20.88

GC content: 69.73

Gene sequence:

>1011_bases
ATGGAGCCGATGAGCGCCGGGCTGATGATCGCGATCGTGGTCGCGGCCTTCGCCGTGTTCGTGGTGGTGAAGACCGCGGT
GGTGGTGCCGCAGCAGAACGCGTTCGTGGTGGAGCGGCTGGGCCGGTTCCACAGCGTGCTCGACGCCGGCTTCCACGTGC
TGCTGCCGTTCGCGGACGTCATCCGCTACCGGCACACGCTGAAGGAGCAGGCGGTCGACATCCCCGAGCAGATCTGCATC
ACCAAGGACAACGTGCAGGTGGCGGTGGACGGCATCCTCTACCTGAAGGTGCTCGACGCCCAGCGCGCGTCCTATGGCAT
CGCGGACTACTACTACGCCATCAGCCAGCTGGCGCAGACCGCGCTCCGCTCCGAGATCGGCAAGATCGACCTCGACCGGA
CGTTCGAGGAGCGCTCGCACATCAACGCCATGGTCGTCACGGAGCTCGACAAGGCCACCGGGCCCTGGGGCGTGAAGGTG
CTGCGCTACGAGATCAAGAACATCACCCCGCCGCAGGACGTGCTCGCCGCCATGGAGAAGCAGATGCGCGCCGAGCGCGA
GAAGCGCGCGGTGGTGCTCACCTCCGAGGGCGAGCGCGACGCCGCCATCAACAACGCGGAGGGCAAGAAGCAGCAGGTCA
TCAAGGAGTCCGAGGCCTCGCGCCAGCAGCAGATCAACGAGGCCGAGGGTCAGGCCCAGGCCATCCTCGCGGTCGCGCAC
GCCACCGCCGAGGGCCTGCGCAAGGTGGCGGAGGCGATCTCCGGGCCGGGCGGCGTGGAGGCGGTCCAGCTCCGCGTGGC
CGAGCAGTACGTGGAGCAGTTCGGCCAGCTCGCGAAGGTGAACAACACGGTGATCCTGCCGGCCACGCTCTCCGACGTGG
GTTCGATGGTGGCGGCGGCCATGAACGTGCTGAAGACCGCGCGCGCCGAGGAGCCGGTGCGCAGCGCCGCCATGGCCCCG
CCGCGCATGGGGGCCGCCGTGCCGCCGCGCCCCCCGCTGCCGCGGCCCTGA

Upstream 100 bases:

>100_bases
GCGCTCCGGGCCGGCCAGCGCTGCCGGGTGGAGCGGGTCGAGGGCGTGCTGCTGTGGGTCCGCGCCGCCTGACGGCGCGC
ACGAGGTCCAGGAGGACGGG

Downstream 100 bases:

>100_bases
GAAGCCGCCCGCCCCGCCGCCGGCGGGGTGGGCGCCGCGACGGAGCGTGCCGGGGCTCGCCGGCGTCCCCATCCTCTCCA
GCGAGGAGGGACACGCATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MEPMSAGLMIAIVVAAFAVFVVVKTAVVVPQQNAFVVERLGRFHSVLDAGFHVLLPFADVIRYRHTLKEQAVDIPEQICI
TKDNVQVAVDGILYLKVLDAQRASYGIADYYYAISQLAQTALRSEIGKIDLDRTFEERSHINAMVVTELDKATGPWGVKV
LRYEIKNITPPQDVLAAMEKQMRAEREKRAVVLTSEGERDAAINNAEGKKQQVIKESEASRQQQINEAEGQAQAILAVAH
ATAEGLRKVAEAISGPGGVEAVQLRVAEQYVEQFGQLAKVNNTVILPATLSDVGSMVAAAMNVLKTARAEEPVRSAAMAP
PRMGAAVPPRPPLPRP

Sequences:

>Translated_336_residues
MEPMSAGLMIAIVVAAFAVFVVVKTAVVVPQQNAFVVERLGRFHSVLDAGFHVLLPFADVIRYRHTLKEQAVDIPEQICI
TKDNVQVAVDGILYLKVLDAQRASYGIADYYYAISQLAQTALRSEIGKIDLDRTFEERSHINAMVVTELDKATGPWGVKV
LRYEIKNITPPQDVLAAMEKQMRAEREKRAVVLTSEGERDAAINNAEGKKQQVIKESEASRQQQINEAEGQAQAILAVAH
ATAEGLRKVAEAISGPGGVEAVQLRVAEQYVEQFGQLAKVNNTVILPATLSDVGSMVAAAMNVLKTARAEEPVRSAAMAP
PRMGAAVPPRPPLPRP
>Mature_336_residues
MEPMSAGLMIAIVVAAFAVFVVVKTAVVVPQQNAFVVERLGRFHSVLDAGFHVLLPFADVIRYRHTLKEQAVDIPEQICI
TKDNVQVAVDGILYLKVLDAQRASYGIADYYYAISQLAQTALRSEIGKIDLDRTFEERSHINAMVVTELDKATGPWGVKV
LRYEIKNITPPQDVLAAMEKQMRAEREKRAVVLTSEGERDAAINNAEGKKQQVIKESEASRQQQINEAEGQAQAILAVAH
ATAEGLRKVAEAISGPGGVEAVQLRVAEQYVEQFGQLAKVNNTVILPATLSDVGSMVAAAMNVLKTARAEEPVRSAAMAP
PRMGAAVPPRPPLPRP

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=277, Percent_Identity=51.6245487364621, Blast_Score=274, Evalue=8e-74,
Organism=Homo sapiens, GI38016911, Length=217, Percent_Identity=31.3364055299539, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI221316744, Length=201, Percent_Identity=31.8407960199005, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI21686995, Length=201, Percent_Identity=31.8407960199005, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI7657615, Length=184, Percent_Identity=26.0869565217391, Blast_Score=66, Evalue=5e-11,
Organism=Escherichia coli, GI1786697, Length=303, Percent_Identity=35.973597359736, Blast_Score=201, Evalue=6e-53,
Organism=Caenorhabditis elegans, GI32564147, Length=281, Percent_Identity=49.4661921708185, Blast_Score=280, Evalue=1e-75,
Organism=Caenorhabditis elegans, GI17569493, Length=182, Percent_Identity=31.8681318681319, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI193209764, Length=188, Percent_Identity=31.9148936170213, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17569497, Length=188, Percent_Identity=32.9787234042553, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI71989955, Length=188, Percent_Identity=31.9148936170213, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71989948, Length=188, Percent_Identity=31.9148936170213, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI193210507, Length=198, Percent_Identity=33.3333333333333, Blast_Score=85, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17570161, Length=198, Percent_Identity=33.3333333333333, Blast_Score=85, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI25153583, Length=223, Percent_Identity=31.8385650224215, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71987621, Length=223, Percent_Identity=31.8385650224215, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71987612, Length=223, Percent_Identity=31.8385650224215, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI32566490, Length=198, Percent_Identity=31.8181818181818, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17569499, Length=203, Percent_Identity=30.0492610837438, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17570459, Length=202, Percent_Identity=29.7029702970297, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45550506, Length=277, Percent_Identity=50.5415162454874, Blast_Score=273, Evalue=1e-73,
Organism=Drosophila melanogaster, GI45556022, Length=198, Percent_Identity=33.8383838383838, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24657857, Length=215, Percent_Identity=33.953488372093, Blast_Score=91, Evalue=8e-19,
Organism=Drosophila melanogaster, GI18860517, Length=217, Percent_Identity=32.258064516129, Blast_Score=91, Evalue=8e-19,
Organism=Drosophila melanogaster, GI281365664, Length=219, Percent_Identity=34.2465753424658, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI62484448, Length=215, Percent_Identity=33.953488372093, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI62484274, Length=215, Percent_Identity=33.953488372093, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI21356845, Length=191, Percent_Identity=25.6544502617801, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI281361631, Length=203, Percent_Identity=24.6305418719212, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI28573263, Length=196, Percent_Identity=29.0816326530612, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI281361633, Length=203, Percent_Identity=24.6305418719212, Blast_Score=72, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 36524; Mature: 36524

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPMSAGLMIAIVVAAFAVFVVVKTAVVVPQQNAFVVERLGRFHSVLDAGFHVLLPFADV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH
IRYRHTLKEQAVDIPEQICITKDNVQVAVDGILYLKVLDAQRASYGIADYYYAISQLAQT
HHHHHHHHHHHHCCCHHHEEECCCCEEEEHHHHEEHHHHHHHHHCCHHHHHHHHHHHHHH
ALRSEIGKIDLDRTFEERSHINAMVVTELDKATGPWGVKVLRYEIKNITPPQDVLAAMEK
HHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH
QMRAEREKRAVVLTSEGERDAAINNAEGKKQQVIKESEASRQQQINEAEGQAQAILAVAH
HHHHHHHHCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ATAEGLRKVAEAISGPGGVEAVQLRVAEQYVEQFGQLAKVNNTVILPATLSDVGSMVAAA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHH
MNVLKTARAEEPVRSAAMAPPRMGAAVPPRPPLPRP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEPMSAGLMIAIVVAAFAVFVVVKTAVVVPQQNAFVVERLGRFHSVLDAGFHVLLPFADV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH
IRYRHTLKEQAVDIPEQICITKDNVQVAVDGILYLKVLDAQRASYGIADYYYAISQLAQT
HHHHHHHHHHHHCCCHHHEEECCCCEEEEHHHHEEHHHHHHHHHCCHHHHHHHHHHHHHH
ALRSEIGKIDLDRTFEERSHINAMVVTELDKATGPWGVKVLRYEIKNITPPQDVLAAMEK
HHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH
QMRAEREKRAVVLTSEGERDAAINNAEGKKQQVIKESEASRQQQINEAEGQAQAILAVAH
HHHHHHHHCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ATAEGLRKVAEAISGPGGVEAVQLRVAEQYVEQFGQLAKVNNTVILPATLSDVGSMVAAA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHH
MNVLKTARAEEPVRSAAMAPPRMGAAVPPRPPLPRP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]