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The map label for this gene is yfiK [H]

Identifier: 220916020

GI number: 220916020

Start: 1025761

End: 1026387

Strand: Direct

Name: yfiK [H]

Synonym: A2cp1_0906

Alternate gene names: 220916020

Gene position: 1025761-1026387 (Clockwise)

Preceding gene: 220916016

Following gene: 220916021

Centisome position: 20.4

GC content: 82.3

Gene sequence:

>627_bases
ATGGAGCCGCTCCGGGTGCTGGTGGTCTCGGCCGATCCGCTGGCGCGGGCCGGCCTCGCCGCGCTGCTCGGCCTGAGCCC
GGAGCTCCGGCTCGCGGGCGAGGCGGAGCCGGCGCGCGCGCCGGCCGCGGCGCGCGAGGTGGACGCGGCGCTCTGGGACC
TGGGCGCGCCCGCCGCCGCCCGCGGCGCGGCGGACGCGGGCGGGGCCGAGGCGCTCGCGGCGCTCGCGGCGGGGCTGCCC
GCGGTCGCGCTGGTGGCCGGGGAGGCGCAGGCGGGCGAGGCGCTCCGGGCCGGCGCGCGGGGCGTGCTCCAGCGCGGCGC
CGGGGCGGAGGCGATCGCCGCGGCGCTGCGCGCGGCGGTCAGCGGGCTGACCGCGCTCGATCCCGAGCTCGCGGCGACGC
TGCTCCGGGCGCCCGCCGCCGAGGCGGGCGGCCCGCTCACGCCGCGCGAGCGCGAGGTGCTGGCGCTCGTGGCGGAGGGG
CTCGGCAACAAGGCCATCGCCGGGCGACTCGGCATCTCCGAGCACACCGCCAAGTTCCACGTGAACGCGATCCTCGGGAA
GCTCGGCGCCGGCTCGCGCGCCGAGGCCATCGTGCGCGCGGCGCGGCTCGGGCTGGTGGTGCTGTGA

Upstream 100 bases:

>100_bases
ATGGGCAGGTCGCGCCCGGCGCGCGGGGAGGTGCGCGCGCCGCAGGGGGCGCCGGTTGCGGGACCGGGCCGGTCCGGTCG
AGGGCGGTTAGATCCGCGGG

Downstream 100 bases:

>100_bases
CGTCGCCTGGGCGCGGTGGCGTCGGGGCGGCGCGGCAGGGCGCCGCTGCCCCGCGCGGGCGTGGCGCGCGTCCGGGCGGC
GGGCGATCGGCAGGTGCGGG

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MEPLRVLVVSADPLARAGLAALLGLSPELRLAGEAEPARAPAAAREVDAALWDLGAPAAARGAADAGGAEALAALAAGLP
AVALVAGEAQAGEALRAGARGVLQRGAGAEAIAAALRAAVSGLTALDPELAATLLRAPAAEAGGPLTPREREVLALVAEG
LGNKAIAGRLGISEHTAKFHVNAILGKLGAGSRAEAIVRAARLGLVVL

Sequences:

>Translated_208_residues
MEPLRVLVVSADPLARAGLAALLGLSPELRLAGEAEPARAPAAAREVDAALWDLGAPAAARGAADAGGAEALAALAAGLP
AVALVAGEAQAGEALRAGARGVLQRGAGAEAIAAALRAAVSGLTALDPELAATLLRAPAAEAGGPLTPREREVLALVAEG
LGNKAIAGRLGISEHTAKFHVNAILGKLGAGSRAEAIVRAARLGLVVL
>Mature_208_residues
MEPLRVLVVSADPLARAGLAALLGLSPELRLAGEAEPARAPAAAREVDAALWDLGAPAAARGAADAGGAEALAALAAGLP
AVALVAGEAQAGEALRAGARGVLQRGAGAEAIAAALRAAVSGLTALDPELAATLLRAPAAEAGGPLTPREREVLALVAEG
LGNKAIAGRLGISEHTAKFHVNAILGKLGAGSRAEAIVRAARLGLVVL

Specific function: Member of the two-component regulatory system yfiJ/yfiK [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790102, Length=197, Percent_Identity=31.4720812182741, Blast_Score=81, Evalue=4e-17,
Organism=Escherichia coli, GI1787473, Length=211, Percent_Identity=34.5971563981043, Blast_Score=77, Evalue=6e-16,
Organism=Escherichia coli, GI1788521, Length=208, Percent_Identity=30.2884615384615, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 20281; Mature: 20281

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPLRVLVVSADPLARAGLAALLGLSPELRLAGEAEPARAPAAAREVDAALWDLGAPAAA
CCCEEEEEECCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCHHH
RGAADAGGAEALAALAAGLPAVALVAGEAQAGEALRAGARGVLQRGAGAEAIAAALRAAV
CCCCCCCHHHHHHHHHHCCCCEEHEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SGLTALDPELAATLLRAPAAEAGGPLTPREREVLALVAEGLGNKAIAGRLGISEHTAKFH
HCCHHCCHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHH
VNAILGKLGAGSRAEAIVRAARLGLVVL
HHHHHHHCCCCHHHHHHHHHHHHCCEEC
>Mature Secondary Structure
MEPLRVLVVSADPLARAGLAALLGLSPELRLAGEAEPARAPAAAREVDAALWDLGAPAAA
CCCEEEEEECCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCHHH
RGAADAGGAEALAALAAGLPAVALVAGEAQAGEALRAGARGVLQRGAGAEAIAAALRAAV
CCCCCCCHHHHHHHHHHCCCCEEHEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SGLTALDPELAATLLRAPAAEAGGPLTPREREVLALVAEGLGNKAIAGRLGISEHTAKFH
HCCHHCCHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHH
VNAILGKLGAGSRAEAIVRAARLGLVVL
HHHHHHHCCCCHHHHHHHHHHHHCCEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]