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The map label for this gene is yadH [H]

Identifier: 220916000

GI number: 220916000

Start: 1004896

End: 1005657

Strand: Direct

Name: yadH [H]

Synonym: A2cp1_0886

Alternate gene names: 220916000

Gene position: 1004896-1005657 (Clockwise)

Preceding gene: 220915999

Following gene: 220916001

Centisome position: 19.98

GC content: 69.42

Gene sequence:

>762_bases
ATGATCTCCCTGGGACTGCGGACGCTGTTCGCGAAGGAGGTGCGCCGGTTCCTGCGCGTACCGGGGCAGACCCTGCTCTC
GCCGCTCGTGACCACCACGCTCTACTTCGTGGTGTTCGGCTACTCGCTGGGCGCCCGCCTCGCCGACGTCGAGGGCGTGC
CCTACGCGCGCTTCATCGTGCCCGGCCTGGTGACGCTGGGCGTGGTCACGAACGCCTACCTCAACAGCGCCTCGTCGCTG
TTCGTGATGAAGCTGCAGGGCACCATGGTGGACCTGCTCGTCTCGCCGCTCTCCTACGGCGAGGTGCTGGCCGGCTTCAT
GGGCGCGGCGGTGGTGCGCGGCATCCTGGTGGGCGGGGTGATGTGGGTGGTGGCCGGCCTGTTCGGTGGGTTCCAGCTCG
CGCACCCGCTCACGGCGGTGGCGCTGCTGGTGCTCGTCGCGGTCGTGTTCGCCGCGCTCGGCGTCGTCACGGCCATCTGG
GCCAGCACGTTCGAGCAGGTGAACTTCTTCCCGACGTTCTTCATCACGCCGCTCACGTTCCTGGGCGGCGTCTTCTACTC
GATCGAGATGCTCCCGCCGGCGCTCCGGCGGCTCACCGCGCTCAACCCGATCTTCTACATGGTGGACGGGGTGCGGTTCG
GGATGCTCGGGATCTCCGACGCCGCTCCATGGGTGGGGGCGGCGATGCTGGCGCTGCTGGCCGCGATCTCGGTGGGCGGC
GCGTACGCGCTCCTCCGGTCCGGCTACAAGCTGAGGGGCTGA

Upstream 100 bases:

>100_bases
CCGCGGCAGGCCTGGGGGTGAAGGACGTGGAGACCCGGCGCACCACGCTCGAGGACGTGTTCGTCCGGCTCCTGGCCGGT
GGACAGGCGCGGGGGGACCG

Downstream 100 bases:

>100_bases
GCGGGCGGGCCCCCGCCTCCCACCTCCGGTGGACGCCCCATCCGGAGCTTTTCGGGATCGAATTCGGCCCGGCTTGGGTT
TATGCTACGGCGCCCTCAGA

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MISLGLRTLFAKEVRRFLRVPGQTLLSPLVTTTLYFVVFGYSLGARLADVEGVPYARFIVPGLVTLGVVTNAYLNSASSL
FVMKLQGTMVDLLVSPLSYGEVLAGFMGAAVVRGILVGGVMWVVAGLFGGFQLAHPLTAVALLVLVAVVFAALGVVTAIW
ASTFEQVNFFPTFFITPLTFLGGVFYSIEMLPPALRRLTALNPIFYMVDGVRFGMLGISDAAPWVGAAMLALLAAISVGG
AYALLRSGYKLRG

Sequences:

>Translated_253_residues
MISLGLRTLFAKEVRRFLRVPGQTLLSPLVTTTLYFVVFGYSLGARLADVEGVPYARFIVPGLVTLGVVTNAYLNSASSL
FVMKLQGTMVDLLVSPLSYGEVLAGFMGAAVVRGILVGGVMWVVAGLFGGFQLAHPLTAVALLVLVAVVFAALGVVTAIW
ASTFEQVNFFPTFFITPLTFLGGVFYSIEMLPPALRRLTALNPIFYMVDGVRFGMLGISDAAPWVGAAMLALLAAISVGG
AYALLRSGYKLRG
>Mature_253_residues
MISLGLRTLFAKEVRRFLRVPGQTLLSPLVTTTLYFVVFGYSLGARLADVEGVPYARFIVPGLVTLGVVTNAYLNSASSL
FVMKLQGTMVDLLVSPLSYGEVLAGFMGAAVVRGILVGGVMWVVAGLFGGFQLAHPLTAVALLVLVAVVFAALGVVTAIW
ASTFEQVNFFPTFFITPLTFLGGVFYSIEMLPPALRRLTALNPIFYMVDGVRFGMLGISDAAPWVGAAMLALLAAISVGG
AYALLRSGYKLRG

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=218, Percent_Identity=46.3302752293578, Blast_Score=198, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 26882; Mature: 26882

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]