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The map label for this gene is ctaC [H]

Identifier: 220915969

GI number: 220915969

Start: 959695

End: 960747

Strand: Direct

Name: ctaC [H]

Synonym: A2cp1_0855

Alternate gene names: 220915969

Gene position: 959695-960747 (Clockwise)

Preceding gene: 220915968

Following gene: 220915970

Centisome position: 19.08

GC content: 68.76

Gene sequence:

>1053_bases
ATGAACGACCTCCTGCGAAGAATGCTGTTCCTCCCGGACCAGGCGAGCGACTACGCGCGCCAGGTGGACGGGCTCCACTA
CTTCGTCATCATCACCACCATGCTCGCGGCGGCGGGCGTGTTCGCCACCGCGATCTACTTCTTCGTGCGGTACCGGCGCC
GGGCGGACACCGACGTCACCCCGCGCGTCGAGCCGAAGGCCATCCACGAGGTCATCTTCGTGGGGCTGCCGCTGGCGTTC
TTCCTGGTGTGGTTCGCGATCGGCTTCCCGCAGTTCGCGAAGCTGCAGACGCCGCCCAAGGACGCGATGGACGTCTACGT
CCAGGGCAAGAAGTGGATGTGGAAGTTCGCGTACCCGGGCGGCCCGAACTCGGTGGACGTGCTGCGCGTCCCCGCCGGCC
GGCCGGTGCGGCTGCTCATCACCTCGCGCGACGTGATCCACTCGTTCTACGTGCCGGCGCTCCGGGTGAAGCAGGACGCG
CTCCCGGGCCGCTACACGCAGACGTGGTTCAACGCCGACCGGCCGGGCCGCTACGAGATCTTCTGCGCCGAGTACTGCGG
CCTCGCGCACTCCGGGATGATCGGCGAGCTGGTGGTGATGCCGGCGGAGGAGTTCGATCAGTGGCTCGCCACGCAGGGGC
GCGGGGTGGCGGGGTCGCAGGACGGCACGCCCGTCCCCGGCGAGCCGGTGCGCCCGGCCTCCAACGTCATCGAGGAGGGG
CGGCGGCTGGCCAGCGAGCAGGGCTGCCTGAAGTGCCACTCGGTGGACGGCACGCGGCACATCGGGCCGACCTGGGTGGA
CCTCTACGAGCGGAACGAGAAGCTCCAGAGCGGGAAGAGCGTGCAGGCCGACGAGGGGTATCTCACCAAGTCGATGATGG
ATCCCGCCGCGGACATCGTGGCGGGCTACCAGAACGTGATGCCGACCTACCAGGGCAAGCTCGCACCGCCCGAGGCGGCG
GCCATCGTCGAGTTCATCAAGTCCTTGAAGACCCCGGCGGTCCAGAGCGGTCCGTCGGAGGGCCCGGTCTATGAGTCCAT
CCCACGCAAGTGA

Upstream 100 bases:

>100_bases
GCATCGTGCGCGCCGGCGCGGCCGTGGTGCTGGTGGCCCTCACCGGCCTGATCGCCGCGCTGGTCTGGCGCGAGCGGCGG
GCCAAGGCGAGGCAGACGGC

Downstream 100 bases:

>100_bases
CGTTCCCGTGTACAACCCGCGGAACTACCTCAACTCGCCCGCGACCGGCCTGAAGTCCTGGATGCTGACCCAGGACCACA
AGCGGATCGGGGTGATGTTC

Product: cytochrome c oxidase, subunit II

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II; Oxidase aa(3) subunit 2 [H]

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MNDLLRRMLFLPDQASDYARQVDGLHYFVIITTMLAAAGVFATAIYFFVRYRRRADTDVTPRVEPKAIHEVIFVGLPLAF
FLVWFAIGFPQFAKLQTPPKDAMDVYVQGKKWMWKFAYPGGPNSVDVLRVPAGRPVRLLITSRDVIHSFYVPALRVKQDA
LPGRYTQTWFNADRPGRYEIFCAEYCGLAHSGMIGELVVMPAEEFDQWLATQGRGVAGSQDGTPVPGEPVRPASNVIEEG
RRLASEQGCLKCHSVDGTRHIGPTWVDLYERNEKLQSGKSVQADEGYLTKSMMDPAADIVAGYQNVMPTYQGKLAPPEAA
AIVEFIKSLKTPAVQSGPSEGPVYESIPRK

Sequences:

>Translated_350_residues
MNDLLRRMLFLPDQASDYARQVDGLHYFVIITTMLAAAGVFATAIYFFVRYRRRADTDVTPRVEPKAIHEVIFVGLPLAF
FLVWFAIGFPQFAKLQTPPKDAMDVYVQGKKWMWKFAYPGGPNSVDVLRVPAGRPVRLLITSRDVIHSFYVPALRVKQDA
LPGRYTQTWFNADRPGRYEIFCAEYCGLAHSGMIGELVVMPAEEFDQWLATQGRGVAGSQDGTPVPGEPVRPASNVIEEG
RRLASEQGCLKCHSVDGTRHIGPTWVDLYERNEKLQSGKSVQADEGYLTKSMMDPAADIVAGYQNVMPTYQGKLAPPEAA
AIVEFIKSLKTPAVQSGPSEGPVYESIPRK
>Mature_350_residues
MNDLLRRMLFLPDQASDYARQVDGLHYFVIITTMLAAAGVFATAIYFFVRYRRRADTDVTPRVEPKAIHEVIFVGLPLAF
FLVWFAIGFPQFAKLQTPPKDAMDVYVQGKKWMWKFAYPGGPNSVDVLRVPAGRPVRLLITSRDVIHSFYVPALRVKQDA
LPGRYTQTWFNADRPGRYEIFCAEYCGLAHSGMIGELVVMPAEEFDQWLATQGRGVAGSQDGTPVPGEPVRPASNVIEEG
RRLASEQGCLKCHSVDGTRHIGPTWVDLYERNEKLQSGKSVQADEGYLTKSMMDPAADIVAGYQNVMPTYQGKLAPPEAA
AIVEFIKSLKTPAVQSGPSEGPVYESIPRK

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Homo sapiens, GI251831110, Length=121, Percent_Identity=37.1900826446281, Blast_Score=80, Evalue=2e-15,
Organism=Escherichia coli, GI1786635, Length=195, Percent_Identity=28.2051282051282, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR014222
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2; PF02790 COX2_TM; PF00034 Cytochrom_C [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 38949; Mature: 38949

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS00078 COX2 ; PS50857 COX2_CUA ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDLLRRMLFLPDQASDYARQVDGLHYFVIITTMLAAAGVFATAIYFFVRYRRRADTDVT
CHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PRVEPKAIHEVIFVGLPLAFFLVWFAIGFPQFAKLQTPPKDAMDVYVQGKKWMWKFAYPG
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHEEEECCCEEEEEEECCC
GPNSVDVLRVPAGRPVRLLITSRDVIHSFYVPALRVKQDALPGRYTQTWFNADRPGRYEI
CCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEE
FCAEYCGLAHSGMIGELVVMPAEEFDQWLATQGRGVAGSQDGTPVPGEPVRPASNVIEEG
EHHHHCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
RRLASEQGCLKCHSVDGTRHIGPTWVDLYERNEKLQSGKSVQADEGYLTKSMMDPAADIV
HHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCHHHHHH
AGYQNVMPTYQGKLAPPEAAAIVEFIKSLKTPAVQSGPSEGPVYESIPRK
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNDLLRRMLFLPDQASDYARQVDGLHYFVIITTMLAAAGVFATAIYFFVRYRRRADTDVT
CHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PRVEPKAIHEVIFVGLPLAFFLVWFAIGFPQFAKLQTPPKDAMDVYVQGKKWMWKFAYPG
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHEEEECCCEEEEEEECCC
GPNSVDVLRVPAGRPVRLLITSRDVIHSFYVPALRVKQDALPGRYTQTWFNADRPGRYEI
CCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEE
FCAEYCGLAHSGMIGELVVMPAEEFDQWLATQGRGVAGSQDGTPVPGEPVRPASNVIEEG
EHHHHCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
RRLASEQGCLKCHSVDGTRHIGPTWVDLYERNEKLQSGKSVQADEGYLTKSMMDPAADIV
HHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCHHHHHH
AGYQNVMPTYQGKLAPPEAAAIVEFIKSLKTPAVQSGPSEGPVYESIPRK
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7678007 [H]