Click here to switch to the map view.

The map label for this gene is yaaH [C]

Identifier: 220915877

GI number: 220915877

Start: 853432

End: 854076

Strand: Direct

Name: yaaH [C]

Synonym: A2cp1_0761

Alternate gene names: 220915877

Gene position: 853432-854076 (Clockwise)

Preceding gene: 220915876

Following gene: 220915881

Centisome position: 16.97

GC content: 65.12

Gene sequence:

>645_bases
ATGAAGGACGTGCAGACGGCGAAGGCGATCCCCCAGATCCCCAGCATCGATCTTGGCCAGGCGGCGGCGCTGGCGGAGAC
GGTCATCAAGGACACCACCGCGAACCCCGCGCCGCTGGGGCTGATGGGCTTCGGGCTCACCACCGTGCTGCTCAACCTGC
ACAACGCCGGCATCATCGGCATCGGCAGCATGATCCTGGCGATGGGCCTGTTCTACGGCGGCCTCGCCCAGATCATCGCC
GGCGTGATGGAGTGGAAGAAGAAGAACACGTTCGGCATGGTGGCGTTCACGTCGTACGGCTTCTTCTGGATCTCGCTGGT
GGCGCTCATCGTCATGCCGCGCTTCGGGATCGCCGACGCCTCGGACAAGAACGCCATGGCCGCCTACCTGTTCATCTGGG
GCCTGTTCTCGATCGTGCTCTTCATCGCGACGCTCAAGATGAACCGCACCATCATGCTGGTCTTCTTCGCGCTGGTGGTG
CTGTTCATCCTGCTCGGCCTGGGCGACGCGACCGGCAACGCCACCATCACCCGCATCGCCGGGTACGAGGGCATCGCCTG
CGGCCTGGGCGCCATCTACCTGGGCGCGGCGCAGATCCTGAACGAGGTCTACGGGCGGAAGGTGCTGCCCATCGGCGAGC
TGTAG

Upstream 100 bases:

>100_bases
CATGTCAGGTGGATTGCGCATAAAAGTGCGTCCGCCGTTCAAATCATTGCGCAACACGTGCTATGGGCTCCGGAACCCAC
CCGATCCCGGAGGCGACGGA

Downstream 100 bases:

>100_bases
CCAGGGCCACGCCCCCGAGACGCGAGAACGGCAGGTCCCGCGCGCGGGGCCTGCCGTCTCTCGTTCCGGCGCGGGCCGCC
GGACGCGCTACAGCGCCGAC

Product: GPR1/FUN34/yaaH family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MKDVQTAKAIPQIPSIDLGQAAALAETVIKDTTANPAPLGLMGFGLTTVLLNLHNAGIIGIGSMILAMGLFYGGLAQIIA
GVMEWKKKNTFGMVAFTSYGFFWISLVALIVMPRFGIADASDKNAMAAYLFIWGLFSIVLFIATLKMNRTIMLVFFALVV
LFILLGLGDATGNATITRIAGYEGIACGLGAIYLGAAQILNEVYGRKVLPIGEL

Sequences:

>Translated_214_residues
MKDVQTAKAIPQIPSIDLGQAAALAETVIKDTTANPAPLGLMGFGLTTVLLNLHNAGIIGIGSMILAMGLFYGGLAQIIA
GVMEWKKKNTFGMVAFTSYGFFWISLVALIVMPRFGIADASDKNAMAAYLFIWGLFSIVLFIATLKMNRTIMLVFFALVV
LFILLGLGDATGNATITRIAGYEGIACGLGAIYLGAAQILNEVYGRKVLPIGEL
>Mature_214_residues
MKDVQTAKAIPQIPSIDLGQAAALAETVIKDTTANPAPLGLMGFGLTTVLLNLHNAGIIGIGSMILAMGLFYGGLAQIIA
GVMEWKKKNTFGMVAFTSYGFFWISLVALIVMPRFGIADASDKNAMAAYLFIWGLFSIVLFIATLKMNRTIMLVFFALVV
LFILLGLGDATGNATITRIAGYEGIACGLGAIYLGAAQILNEVYGRKVLPIGEL

Specific function: Unknown

COG id: COG1584

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GPR1/FUN34/yaaH family [H]

Homologues:

Organism=Escherichia coli, GI1786191, Length=180, Percent_Identity=56.6666666666667, Blast_Score=214, Evalue=4e-57,
Organism=Saccharomyces cerevisiae, GI6324329, Length=174, Percent_Identity=43.1034482758621, Blast_Score=111, Evalue=8e-26,
Organism=Saccharomyces cerevisiae, GI6319855, Length=121, Percent_Identity=44.6280991735537, Blast_Score=91, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6320592, Length=185, Percent_Identity=28.6486486486486, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000791 [H]

Pfam domain/function: PF01184 Grp1_Fun34_YaaH [H]

EC number: NA

Molecular weight: Translated: 22699; Mature: 22699

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS00850 GLY_RADICAL_1 ; PS01114 GPR1_FUN34_YAAH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDVQTAKAIPQIPSIDLGQAAALAETVIKDTTANPAPLGLMGFGLTTVLLNLHNAGIIG
CCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHH
IGSMILAMGLFYGGLAQIIAGVMEWKKKNTFGMVAFTSYGFFWISLVALIVMPRFGIADA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCC
SDKNAMAAYLFIWGLFSIVLFIATLKMNRTIMLVFFALVVLFILLGLGDATGNATITRIA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
GYEGIACGLGAIYLGAAQILNEVYGRKVLPIGEL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKDVQTAKAIPQIPSIDLGQAAALAETVIKDTTANPAPLGLMGFGLTTVLLNLHNAGIIG
CCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHH
IGSMILAMGLFYGGLAQIIAGVMEWKKKNTFGMVAFTSYGFFWISLVALIVMPRFGIADA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCC
SDKNAMAAYLFIWGLFSIVLFIATLKMNRTIMLVFFALVVLFILLGLGDATGNATITRIA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
GYEGIACGLGAIYLGAAQILNEVYGRKVLPIGEL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]