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The map label for this gene is rbn [C]

Identifier: 220915850

GI number: 220915850

Start: 827907

End: 829226

Strand: Direct

Name: rbn [C]

Synonym: A2cp1_0733

Alternate gene names: 220915850

Gene position: 827907-829226 (Clockwise)

Preceding gene: 220915849

Following gene: 220915851

Centisome position: 16.46

GC content: 72.5

Gene sequence:

>1320_bases
GTGCCGGCGCGCCTCGACCAGGGCTCGGGGGTGGCGAAGGTGGAGCGCGAGCTCCGCTTCGCCAGCACCGCGCTCCGGCT
GGCGCTGCGCGTGGTGGAGGGCGAGACCGTGCGCCTGCGCGCGATGGCCCTCACCTACATCTCGCTGTTCGCGCTGGTGC
CGGCGCTGGTGGTGGCGTTCTCGGTGGTGCAGGCGTTCACCGGGATGGACGCCATCTCCAGCCGCGTCCACGACTTCCTC
ATCCAGAACCTGGCGGTGGGCGCCCGCTCGTCCATCGAGCCGTACCTGGACCGCTTCATCCGCAACGCGCACGCGACCAG
CGCGGGCGTGGTGGGCGGCGCGCTCCTGGTCTGGTCGGCGGTGACGCTGTTCACCAACGTGGACCACGCGGTGAACGACG
TCTGGGGCATCCGCCGCCGGCGCAGCATCACGCAGCAGGCGGTGACGTACTGGGTCGGGCTCACGCTCGGCCCGCTCCTG
CTGGCGGCCTCGACCACGCTCGGCGCGTACACGCAGACGCTGCTCGCGAACACCGGCGTGCGCGCGCTGGTGATGCTGAG
CGGCACGCTGCTCAACTGCGCGTTCTTCGCGACGCTCTACCAGATCGTCCCGAACACGCGCGTGAAGCTCCGCGCCGCGG
TGGTGGGCGGCGTCGCGGCGGGCGTGGCCTGGGACGTCGCGAAGTGGGGCTACGCGTTCGTGGTCGCGCGCATCTTCAAG
TACCACGCGATCTACGGCTCGGTGGCGGCGGTCCCGATCTTCCTGTTCTGGCTGTTCGTGTCCTGGACGATCGTGCTGTT
CGGGGCCCGGCTCGCGTACGTGGTGCAGTACGCGCGGACGCTCATGTCCCCGGCGCCGCGCGCGGACTCCGCCATCGCGC
GCGAGATCCTGGCCGGCCGGACCCTGCTCCTGGTCGCGCAGGCGTTCGACCGCGGAGAGGACGCGCCGGATCCCGGCGAC
GTGGCCGCCCGGCTCGGTGCGACCCCCGAGGAGGCGAGCGAGGCTCTGGCCGCCCTCCGGCAGAGGGCGATCGTGGTGTC
GCTGGCCGATGGGGGCCTGGTGCCCGCCCGCCCGCTGGAGAAGATCACGCTCCTGGACGTGAGGCAGGCGGTGTCCGGGC
GGGAGGTGCGTCCGGACCAGCGCGGCATCCTATCGGAAATATTGACGGATCTCGAAGCGAAGGCCGCCGGGCAGCTCGAC
GCGATCACGTTCCGGGAGCTGTGCGACCGGGAGCGCGCCCGCGAGGCCGGCCCTCGTGCCCCGGGAACGGGTGCCCCTGA
AGAGGTGGATCCGACCGCCGCAGGCCCGGCACGCGCGTGA

Upstream 100 bases:

>100_bases
GGAGCGCGGCGACCGCGGCGGCGAGCGTCCCGAGGGCGGCGAGCCGCGCGCGGCGCCCGAGGCCCCGGCCCAGGGCGGCG
AGAAGGCCTGAGGCGGGGCC

Downstream 100 bases:

>100_bases
GCGTGCGCGGATCCCCAGGTCGGGGTCCCGCCCACCCAGACGCGCATGCCCGTGGAACCCTTGCTGATTTCGGAGCCTTC
GGCTAGGCTCTCCCCATCCC

Product: ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 438

Protein sequence:

>439_residues
MPARLDQGSGVAKVERELRFASTALRLALRVVEGETVRLRAMALTYISLFALVPALVVAFSVVQAFTGMDAISSRVHDFL
IQNLAVGARSSIEPYLDRFIRNAHATSAGVVGGALLVWSAVTLFTNVDHAVNDVWGIRRRRSITQQAVTYWVGLTLGPLL
LAASTTLGAYTQTLLANTGVRALVMLSGTLLNCAFFATLYQIVPNTRVKLRAAVVGGVAAGVAWDVAKWGYAFVVARIFK
YHAIYGSVAAVPIFLFWLFVSWTIVLFGARLAYVVQYARTLMSPAPRADSAIAREILAGRTLLLVAQAFDRGEDAPDPGD
VAARLGATPEEASEALAALRQRAIVVSLADGGLVPARPLEKITLLDVRQAVSGREVRPDQRGILSEILTDLEAKAAGQLD
AITFRELCDRERAREAGPRAPGTGAPEEVDPTAAGPARA

Sequences:

>Translated_439_residues
MPARLDQGSGVAKVERELRFASTALRLALRVVEGETVRLRAMALTYISLFALVPALVVAFSVVQAFTGMDAISSRVHDFL
IQNLAVGARSSIEPYLDRFIRNAHATSAGVVGGALLVWSAVTLFTNVDHAVNDVWGIRRRRSITQQAVTYWVGLTLGPLL
LAASTTLGAYTQTLLANTGVRALVMLSGTLLNCAFFATLYQIVPNTRVKLRAAVVGGVAAGVAWDVAKWGYAFVVARIFK
YHAIYGSVAAVPIFLFWLFVSWTIVLFGARLAYVVQYARTLMSPAPRADSAIAREILAGRTLLLVAQAFDRGEDAPDPGD
VAARLGATPEEASEALAALRQRAIVVSLADGGLVPARPLEKITLLDVRQAVSGREVRPDQRGILSEILTDLEAKAAGQLD
AITFRELCDRERAREAGPRAPGTGAPEEVDPTAAGPARA
>Mature_438_residues
PARLDQGSGVAKVERELRFASTALRLALRVVEGETVRLRAMALTYISLFALVPALVVAFSVVQAFTGMDAISSRVHDFLI
QNLAVGARSSIEPYLDRFIRNAHATSAGVVGGALLVWSAVTLFTNVDHAVNDVWGIRRRRSITQQAVTYWVGLTLGPLLL
AASTTLGAYTQTLLANTGVRALVMLSGTLLNCAFFATLYQIVPNTRVKLRAAVVGGVAAGVAWDVAKWGYAFVVARIFKY
HAIYGSVAAVPIFLFWLFVSWTIVLFGARLAYVVQYARTLMSPAPRADSAIAREILAGRTLLLVAQAFDRGEDAPDPGDV
AARLGATPEEASEALAALRQRAIVVSLADGGLVPARPLEKITLLDVRQAVSGREVRPDQRGILSEILTDLEAKAAGQLDA
ITFRELCDRERAREAGPRAPGTGAPEEVDPTAAGPARA

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

Organism=Escherichia coli, GI1790319, Length=269, Percent_Identity=30.8550185873606, Blast_Score=131, Evalue=7e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 47000; Mature: 46869

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPARLDQGSGVAKVERELRFASTALRLALRVVEGETVRLRAMALTYISLFALVPALVVAF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SVVQAFTGMDAISSRVHDFLIQNLAVGARSSIEPYLDRFIRNAHATSAGVVGGALLVWSA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
VTLFTNVDHAVNDVWGIRRRRSITQQAVTYWVGLTLGPLLLAASTTLGAYTQTLLANTGV
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
RALVMLSGTLLNCAFFATLYQIVPNTRVKLRAAVVGGVAAGVAWDVAKWGYAFVVARIFK
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YHAIYGSVAAVPIFLFWLFVSWTIVLFGARLAYVVQYARTLMSPAPRADSAIAREILAGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
TLLLVAQAFDRGEDAPDPGDVAARLGATPEEASEALAALRQRAIVVSLADGGLVPARPLE
HHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHH
KITLLDVRQAVSGREVRPDQRGILSEILTDLEAKAAGQLDAITFRELCDRERAREAGPRA
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
PGTGAPEEVDPTAAGPARA
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PARLDQGSGVAKVERELRFASTALRLALRVVEGETVRLRAMALTYISLFALVPALVVAF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH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CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA