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The map label for this gene is 220915471

Identifier: 220915471

GI number: 220915471

Start: 396057

End: 397352

Strand: Direct

Name: 220915471

Synonym: A2cp1_0350

Alternate gene names: NA

Gene position: 396057-397352 (Clockwise)

Preceding gene: 220915468

Following gene: 220915472

Centisome position: 7.87

GC content: 72.3

Gene sequence:

>1296_bases
ATGAACATGACCCACAGACGCTCCCTGGCGCTCCTCGCGGCGCTCCTCCTCCCTGCGGCGGCCTCCGCGCTGGAGGGCGA
CGTGACCCTGTACGGCACGCTGATGCCGTTCTTCGACAACGCGCGCGTGTCCGACCCGACGCGCCCCGGCCTCTCGCCCG
CGACCGGCGGCGCGACGCAGGTCTCCGATGCTGCGTACACGGGCGTCGCCATCCCGCAGCGCTTCCGCCTCACCTCCGGC
ACGTCCAACATCGGGTTCAAGGGCGGGTTCGACGTGCTGGGCGAGGACCTGCAGGTGTTCTTCCAGGTGGAGAGCGCGGT
CAGCCCCGACGGCGACGCGCCGAACGCCTGGGCCTCGCGCAACAGCGCGGTCGGCGTGAAGGGCAAGTTCGGCCGCGCGT
TCTTCGGCAACTGGGACACGCCGTACAAGTACCCGGTGCTGCTGGTCGGCGCGGTCCGCGGCCTGAACCCGTTCGACAAC
ACCATCACCGCGAACCCCGGCTTCGGCGTCCCCGGCACCACCACCCAGAGCGGCCGGGTGAACGGGAAGGCCGACGCGGC
CTTCAACCGCCGGCAGGGCAACAGCGTCCAGTACTGGACGCCCGAGCTCTACGGGTTCTCGGCGCGCCTCGCGTACTCGG
CCAACGAGTCGAGGACCGTGGCGTCGGCCACCGCGCCGTCCATCAGCCCGACGATCTCCTCGGGCCTGGTGAGCTGGGCC
TACGGGCCGCTGCTCCTGCGGTACGCGTACGAGCGGCACCAGGACTACTTCGGCCTGTCGCAGCTGGGCGGCTCGCCGGT
GTCGCTGACGAACCGGTCGTCCACCGACCAGGGCCACGAGGCGATCGCGCAGCTGGCGCTCCCCACCGGGACGCGCGTCT
CGCTGGTGGGCGAGCGGCTCTCCTACGAGAACGAGGATCGGGCCGTGGGCGCGGTGCGCGAGTACGCCCGGCTGGCCTAC
TACGCGCTCCTGCAGCAGCGCTTCGGCGCGCACCAGGTGTTCGGCTCGTTCGGCCAGTCCGACGCGGGCGAGTGCAAGGT
GGTGGGCGGCGGCGCCTGCACCGTGAACGGCCTCGGCGCCACGCAGTGGAACGCCGGCTACTCGTACGCGCTCACCAAGG
CGGCGGACGTGTACGTCGCGTACTACGAGACGCGGAACGACCGCTCCGCCAGCTACGGCGTGGTGGGCGGGCCGGGCGCG
GTCGCGCCGGGCGGCGACACCCGCGGCTTCGGCCTGGGCCTGCTGTACACGTTCGCGGCGACGGCCAACGTCGGCGCGCC
GAAGGGTTCCCCGTAG

Upstream 100 bases:

>100_bases
CACCGCCAGGCCGACGCGACCGTCAACGGGTGCGCCCACTGCCACACGTTCGACTCGAGGTGCCGTAGCCGTCCAACCCG
CTGCACGACGCAGATCGAAC

Downstream 100 bases:

>100_bases
AGCGCACGGGGACGAGGGGCACCCCGGCCGCCTTCCTCCGCGGCCGGGGCGCTCCTCGCAGTCTTCGCCGGGCCGGGCGG
GCGCCGGGAGCTGCTCGCGC

Product: porin

Products: NA

Alternate protein names: Outer Membrane Porin; Porin Protein; Porin Gram-Negative Type

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MNMTHRRSLALLAALLLPAAASALEGDVTLYGTLMPFFDNARVSDPTRPGLSPATGGATQVSDAAYTGVAIPQRFRLTSG
TSNIGFKGGFDVLGEDLQVFFQVESAVSPDGDAPNAWASRNSAVGVKGKFGRAFFGNWDTPYKYPVLLVGAVRGLNPFDN
TITANPGFGVPGTTTQSGRVNGKADAAFNRRQGNSVQYWTPELYGFSARLAYSANESRTVASATAPSISPTISSGLVSWA
YGPLLLRYAYERHQDYFGLSQLGGSPVSLTNRSSTDQGHEAIAQLALPTGTRVSLVGERLSYENEDRAVGAVREYARLAY
YALLQQRFGAHQVFGSFGQSDAGECKVVGGGACTVNGLGATQWNAGYSYALTKAADVYVAYYETRNDRSASYGVVGGPGA
VAPGGDTRGFGLGLLYTFAATANVGAPKGSP

Sequences:

>Translated_431_residues
MNMTHRRSLALLAALLLPAAASALEGDVTLYGTLMPFFDNARVSDPTRPGLSPATGGATQVSDAAYTGVAIPQRFRLTSG
TSNIGFKGGFDVLGEDLQVFFQVESAVSPDGDAPNAWASRNSAVGVKGKFGRAFFGNWDTPYKYPVLLVGAVRGLNPFDN
TITANPGFGVPGTTTQSGRVNGKADAAFNRRQGNSVQYWTPELYGFSARLAYSANESRTVASATAPSISPTISSGLVSWA
YGPLLLRYAYERHQDYFGLSQLGGSPVSLTNRSSTDQGHEAIAQLALPTGTRVSLVGERLSYENEDRAVGAVREYARLAY
YALLQQRFGAHQVFGSFGQSDAGECKVVGGGACTVNGLGATQWNAGYSYALTKAADVYVAYYETRNDRSASYGVVGGPGA
VAPGGDTRGFGLGLLYTFAATANVGAPKGSP
>Mature_431_residues
MNMTHRRSLALLAALLLPAAASALEGDVTLYGTLMPFFDNARVSDPTRPGLSPATGGATQVSDAAYTGVAIPQRFRLTSG
TSNIGFKGGFDVLGEDLQVFFQVESAVSPDGDAPNAWASRNSAVGVKGKFGRAFFGNWDTPYKYPVLLVGAVRGLNPFDN
TITANPGFGVPGTTTQSGRVNGKADAAFNRRQGNSVQYWTPELYGFSARLAYSANESRTVASATAPSISPTISSGLVSWA
YGPLLLRYAYERHQDYFGLSQLGGSPVSLTNRSSTDQGHEAIAQLALPTGTRVSLVGERLSYENEDRAVGAVREYARLAY
YALLQQRFGAHQVFGSFGQSDAGECKVVGGGACTVNGLGATQWNAGYSYALTKAADVYVAYYETRNDRSASYGVVGGPGA
VAPGGDTRGFGLGLLYTFAATANVGAPKGSP

Specific function: Unknown

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45256; Mature: 45256

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMTHRRSLALLAALLLPAAASALEGDVTLYGTLMPFFDNARVSDPTRPGLSPATGGATQ
CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHCCCCCCCCCCCCCCCCCCCCCCC
VSDAAYTGVAIPQRFRLTSGTSNIGFKGGFDVLGEDLQVFFQVESAVSPDGDAPNAWASR
CCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHCCCCEEEEEEHHHCCCCCCCCCCCCCC
NSAVGVKGKFGRAFFGNWDTPYKYPVLLVGAVRGLNPFDNTITANPGFGVPGTTTQSGRV
CCCEECCCCCCCEEECCCCCCCCCCEEEEEHHHCCCCCCCCEECCCCCCCCCCCCCCCCC
NGKADAAFNRRQGNSVQYWTPELYGFSARLAYSANESRTVASATAPSISPTISSGLVSWA
CCCCCCCCCCCCCCCEEEECHHHHCCEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHH
YGPLLLRYAYERHQDYFGLSQLGGSPVSLTNRSSTDQGHEAIAQLALPTGTRVSLVGERL
HHHHHHHHHHHHHHCCCCHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCCEEEEEHHHH
SYENEDRAVGAVREYARLAYYALLQQRFGAHQVFGSFGQSDAGECKVVGGGACTVNGLGA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCEEEEECCEEEECCCCC
TQWNAGYSYALTKAADVYVAYYETRNDRSASYGVVGGPGAVAPGGDTRGFGLGLLYTFAA
CCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHH
TANVGAPKGSP
HCCCCCCCCCC
>Mature Secondary Structure
MNMTHRRSLALLAALLLPAAASALEGDVTLYGTLMPFFDNARVSDPTRPGLSPATGGATQ
CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHCCCCCCCCCCCCCCCCCCCCCCC
VSDAAYTGVAIPQRFRLTSGTSNIGFKGGFDVLGEDLQVFFQVESAVSPDGDAPNAWASR
CCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHCCCCEEEEEEHHHCCCCCCCCCCCCCC
NSAVGVKGKFGRAFFGNWDTPYKYPVLLVGAVRGLNPFDNTITANPGFGVPGTTTQSGRV
CCCEECCCCCCCEEECCCCCCCCCCEEEEEHHHCCCCCCCCEECCCCCCCCCCCCCCCCC
NGKADAAFNRRQGNSVQYWTPELYGFSARLAYSANESRTVASATAPSISPTISSGLVSWA
CCCCCCCCCCCCCCCEEEECHHHHCCEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHH
YGPLLLRYAYERHQDYFGLSQLGGSPVSLTNRSSTDQGHEAIAQLALPTGTRVSLVGERL
HHHHHHHHHHHHHHCCCCHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCCEEEEEHHHH
SYENEDRAVGAVREYARLAYYALLQQRFGAHQVFGSFGQSDAGECKVVGGGACTVNGLGA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCEEEEECCEEEECCCCC
TQWNAGYSYALTKAADVYVAYYETRNDRSASYGVVGGPGAVAPGGDTRGFGLGLLYTFAA
CCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHH
TANVGAPKGSP
HCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA