| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is ina [H]
Identifier: 220915465
GI number: 220915465
Start: 384969
End: 387260
Strand: Direct
Name: ina [H]
Synonym: A2cp1_0344
Alternate gene names: 220915465
Gene position: 384969-387260 (Clockwise)
Preceding gene: 220915464
Following gene: 220915468
Centisome position: 7.65
GC content: 69.24
Gene sequence:
>2292_bases ATGCGCACCTCACGCACCACCACGCTGGCCTTGCTCGCGGCGCTGGCGCTCGCGCCATCGGCCGCGTTCGCCGCGTCCGA CGAGCCGCAGCTCCCGGACGTCGCCGCGACGACCGACAACCCATCGCACCCGCTCGGCGACGCGCAGGCGGCGCGCAAGG CGATCGCGATCCAGGCGAAGCTCAGCGGGAAGACGAAGGGCAAGACGCACCAGGTGGCACGCGGCCAGTACGTCGAGCTG GAGCGGCAGGGCGAGGATCGGATCTGGACGGTGGTGGGCGAGTTCGGCGAGCAGGTGAACCCGACCTACGGCGGCACCGC CGGCCCGCTGCGCAACCAGATCCCCGAGCCCGACCGAACGGTGGACAACGTCACCATCTGGGCCCCGGACTTCAGCCGCG CGTACTACGAGGACCTGCTCTTCTCGGACGCGCCCGGCGACGTCTCGATGCGGAACTTCTACAAGGAGCTCTCCTCGAAC CGCTACACGGTGAACGGCGAGGTCACCGACTGGGTGAAGGTCCCGCTCAACGAGGCCAACTACGGCTCGAACTACTGCGG CGGCATCGTGTGCGCCCGCACCTGGCTGTTCGTCCGTGACGCGGTGAACGCCTGGTACAACGGGCAGATCGCGGCCGGCC GGACGGTGGCGGAGATCAACGCCTACCTGGCGCAGTACGACGTCTGGGATCGCTACGACTACGACGGCGACGGCAACTTC AACGAGCCGGACGGCTACATCGATCACTTCCAGGCGATCCACGCGGGCGAGGGCGAGGAGACCGGCGGCGGCGCGCAGGG CGACGACGCGATCTGGAGCCACCGCTGGTACGCCTTCTACAACAACATCGGCGCCACCGGCCCGGCGTTCAACCGGTACG GCGGGATCCGGATCGGCGCGAGCGACTTCTGGATCGGCGACTACACCATCGAGCCGGAGAACGGCGGCGTGGGCGTGTTC GCCCACGAGTTCGGCCACGACCTCGGCCTGCCCGACCTCTACGACACCTCCGGCAACACCGGCGGCGCGGAGAACTCGAC CGGCTTCTGGACGCTGTACTCGGTGGGCTCCTACGGCGCCTCGGGGCGGCCGGAGGACGGCCTGGGCACGAAGCCGATCC ACATGAGCGCCTACGAGAAGATCTTCCTCGGCTGGTCGAACTACCAGGTGGTGCGCGCCGGGCAGTACGCGTCGCTGAAG CTCGGCCCGGCGGAGGCGAACACGAAGCAGGCGCAGACGCTGGTGGTGCTGCTGCCGGACAAGATCGTGGAGAGCGAGAT CGGGACGCCGTACGCCGGCACGTACTTCTACCACTCCGGCTCCGGCAACGGCCTCGACCACTCCATGACGCGCCAGGTGA CGCTGCCCGCGGGCGCGTCGCTCGCGGCCAAGGTGAAGTTCGACATCGAGCTGGACTGGGACTACGCGTACCTGACGGTG AACGGCGCGCCGGTCGCCACCAACCTGTCGAGCTCGACGAACCCGAACGGCCAGAACTTCGGCAACGGGATCACCGGCTC GACCGGCGGGGCCTGGGTGGACCTCACCGCCGACCTGTCCGCGTGGGCGGGCCAGACCGTGACGCTCGGGTTCCGCTACT GGACCGACGTGGCGGTGGCCGAGGCGGGCCTGTCGATCGACGACGTCGCGATCTCCGGCCAGCCGCTGGACGGCGCGGAG ACCGATCCGGGCTGGACCTACGACGGGTTCGTCCGCACGAACGGCACGCTCGCGACGCCGTTCTTCAACGCGTACTTCGC CGAGTACCGGCAGTACCGCGGCTACGACCAGTCGCTGAAGACCGGGCCGTACACGTTCGGCTACCTGAACGACCCGACCC TGCAGAACTGGGTGGACCACTTCCCGTACCAGGACGGCCTGCTGGTCTGGTACTACGACACGTCGTTCGAGGACAACAAC GTGGGCGACGCCTGCGCGAGCGGCCGCTGCGGCGGCCTGTTCCTGCCGGTGGACGCGCACCCCGGGTTGATCCTCCGCCC GGACAACGGGAAGGCGTGGCGCCCGCGCTTCCAGGCCTTCGACTCGACGTTCGGCCTCGAGCCGACCGACGTGGTGTGCC TGCACGCGAACAGCCAGCAGGGCTGCTTCGGCGGCCAGCCGGGCAACCCGCTCTTCGACGACACGCAGAGCTACTGGGTG CCGCCGGATCCCTCGCTCAACCACTCCGGCTGGTCGAGCGTGATCGTGCCGAACACCGGGACCACCATCCGCGTGGTCGG GACGTCGGCGCAGGGTGACTTCATGCAGGTGGTGGTCGCGCCGAAGCGCTAG
Upstream 100 bases:
>100_bases GACGTTCGGGTTCCGCCCTTGGGGCGCGGCGCCGGTGGCGCGAAGTGGGGAACACTGCCAGCTCGCCTCACCCACACGCA CGTTCACTCGGGGGAAATCG
Downstream 100 bases:
>100_bases CGGTGCGCGGGGCGGGGAGGGGCCGGCACGCCGCCGGTCCCTCCACCGCGCCCGCGCCGCGCGACGGCTCAGGGGACGTA CACCGCGGGTCCGGGGCGGC
Product: M6 family metalloprotease domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 763; Mature: 763
Protein sequence:
>763_residues MRTSRTTTLALLAALALAPSAAFAASDEPQLPDVAATTDNPSHPLGDAQAARKAIAIQAKLSGKTKGKTHQVARGQYVEL ERQGEDRIWTVVGEFGEQVNPTYGGTAGPLRNQIPEPDRTVDNVTIWAPDFSRAYYEDLLFSDAPGDVSMRNFYKELSSN RYTVNGEVTDWVKVPLNEANYGSNYCGGIVCARTWLFVRDAVNAWYNGQIAAGRTVAEINAYLAQYDVWDRYDYDGDGNF NEPDGYIDHFQAIHAGEGEETGGGAQGDDAIWSHRWYAFYNNIGATGPAFNRYGGIRIGASDFWIGDYTIEPENGGVGVF AHEFGHDLGLPDLYDTSGNTGGAENSTGFWTLYSVGSYGASGRPEDGLGTKPIHMSAYEKIFLGWSNYQVVRAGQYASLK LGPAEANTKQAQTLVVLLPDKIVESEIGTPYAGTYFYHSGSGNGLDHSMTRQVTLPAGASLAAKVKFDIELDWDYAYLTV NGAPVATNLSSSTNPNGQNFGNGITGSTGGAWVDLTADLSAWAGQTVTLGFRYWTDVAVAEAGLSIDDVAISGQPLDGAE TDPGWTYDGFVRTNGTLATPFFNAYFAEYRQYRGYDQSLKTGPYTFGYLNDPTLQNWVDHFPYQDGLLVWYYDTSFEDNN VGDACASGRCGGLFLPVDAHPGLILRPDNGKAWRPRFQAFDSTFGLEPTDVVCLHANSQQGCFGGQPGNPLFDDTQSYWV PPDPSLNHSGWSSVIVPNTGTTIRVVGTSAQGDFMQVVVAPKR
Sequences:
>Translated_763_residues MRTSRTTTLALLAALALAPSAAFAASDEPQLPDVAATTDNPSHPLGDAQAARKAIAIQAKLSGKTKGKTHQVARGQYVEL ERQGEDRIWTVVGEFGEQVNPTYGGTAGPLRNQIPEPDRTVDNVTIWAPDFSRAYYEDLLFSDAPGDVSMRNFYKELSSN RYTVNGEVTDWVKVPLNEANYGSNYCGGIVCARTWLFVRDAVNAWYNGQIAAGRTVAEINAYLAQYDVWDRYDYDGDGNF NEPDGYIDHFQAIHAGEGEETGGGAQGDDAIWSHRWYAFYNNIGATGPAFNRYGGIRIGASDFWIGDYTIEPENGGVGVF AHEFGHDLGLPDLYDTSGNTGGAENSTGFWTLYSVGSYGASGRPEDGLGTKPIHMSAYEKIFLGWSNYQVVRAGQYASLK LGPAEANTKQAQTLVVLLPDKIVESEIGTPYAGTYFYHSGSGNGLDHSMTRQVTLPAGASLAAKVKFDIELDWDYAYLTV NGAPVATNLSSSTNPNGQNFGNGITGSTGGAWVDLTADLSAWAGQTVTLGFRYWTDVAVAEAGLSIDDVAISGQPLDGAE TDPGWTYDGFVRTNGTLATPFFNAYFAEYRQYRGYDQSLKTGPYTFGYLNDPTLQNWVDHFPYQDGLLVWYYDTSFEDNN VGDACASGRCGGLFLPVDAHPGLILRPDNGKAWRPRFQAFDSTFGLEPTDVVCLHANSQQGCFGGQPGNPLFDDTQSYWV PPDPSLNHSGWSSVIVPNTGTTIRVVGTSAQGDFMQVVVAPKR >Mature_763_residues MRTSRTTTLALLAALALAPSAAFAASDEPQLPDVAATTDNPSHPLGDAQAARKAIAIQAKLSGKTKGKTHQVARGQYVEL ERQGEDRIWTVVGEFGEQVNPTYGGTAGPLRNQIPEPDRTVDNVTIWAPDFSRAYYEDLLFSDAPGDVSMRNFYKELSSN RYTVNGEVTDWVKVPLNEANYGSNYCGGIVCARTWLFVRDAVNAWYNGQIAAGRTVAEINAYLAQYDVWDRYDYDGDGNF NEPDGYIDHFQAIHAGEGEETGGGAQGDDAIWSHRWYAFYNNIGATGPAFNRYGGIRIGASDFWIGDYTIEPENGGVGVF AHEFGHDLGLPDLYDTSGNTGGAENSTGFWTLYSVGSYGASGRPEDGLGTKPIHMSAYEKIFLGWSNYQVVRAGQYASLK LGPAEANTKQAQTLVVLLPDKIVESEIGTPYAGTYFYHSGSGNGLDHSMTRQVTLPAGASLAAKVKFDIELDWDYAYLTV NGAPVATNLSSSTNPNGQNFGNGITGSTGGAWVDLTADLSAWAGQTVTLGFRYWTDVAVAEAGLSIDDVAISGQPLDGAE TDPGWTYDGFVRTNGTLATPFFNAYFAEYRQYRGYDQSLKTGPYTFGYLNDPTLQNWVDHFPYQDGLLVWYYDTSFEDNN VGDACASGRCGGLFLPVDAHPGLILRPDNGKAWRPRFQAFDSTFGLEPTDVVCLHANSQQGCFGGQPGNPLFDDTQSYWV PPDPSLNHSGWSSVIVPNTGTTIRVVGTSAQGDFMQVVVAPKR
Specific function: Neutral metalloprotease that is secreted to degrade antibacterial proteins produced by the insect host for its defense (attacins and cecropins). Probably degrades some unknown crucial protein(s) too, since it is toxic when injected to insect larvae [H]
COG id: COG4412
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M6 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012300 - InterPro: IPR008757 [H]
Pfam domain/function: PF05547 Peptidase_M6 [H]
EC number: NA
Molecular weight: Translated: 82737; Mature: 82737
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTSRTTTLALLAALALAPSAAFAASDEPQLPDVAATTDNPSHPLGDAQAARKAIAIQAK CCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEECCCCCCCCCCCHHHHHEEEEEEEE LSGKTKGKTHQVARGQYVELERQGEDRIWTVVGEFGEQVNPTYGGTAGPLRNQIPEPDRT ECCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEHHCCCCCCCCCCCCCCHHHCCCCCCCC VDNVTIWAPDFSRAYYEDLLFSDAPGDVSMRNFYKELSSNRYTVNGEVTDWVKVPLNEAN CCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEECCCEEEEEEECCCCCC YGSNYCGGIVCARTWLFVRDAVNAWYNGQIAAGRTVAEINAYLAQYDVWDRYDYDGDGNF CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCC NEPDGYIDHFQAIHAGEGEETGGGAQGDDAIWSHRWYAFYNNIGATGPAFNRYGGIRIGA CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHCCEEEEEECCCCCCCCCHHCCCCEEECC SDFWIGDYTIEPENGGVGVFAHEFGHDLGLPDLYDTSGNTGGAENSTGFWTLYSVGSYGA CCEEEEEEEECCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC SGRPEDGLGTKPIHMSAYEKIFLGWSNYQVVRAGQYASLKLGPAEANTKQAQTLVVLLPD CCCCCCCCCCCCEECCCEEEEEEECCCEEEEEECCEEEEEECCCCCCCCCCEEEEEECCC KIVESEIGTPYAGTYFYHSGSGNGLDHSMTRQVTLPAGASLAAKVKFDIELDWDYAYLTV HHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEEEEEECCEEEEEE NGAPVATNLSSSTNPNGQNFGNGITGSTGGAWVDLTADLSAWAGQTVTLGFRYWTDVAVA CCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHHCCCEEEEEEEHHHHHHHH EAGLSIDDVAISGQPLDGAETDPGWTYDGFVRTNGTLATPFFNAYFAEYRQYRGYDQSLK HCCCCEEEEEECCCCCCCCCCCCCCEECCEEEECCEEECHHHHHHHHHHHHHCCCCCCCC TGPYTFGYLNDPTLQNWVDHFPYQDGLLVWYYDTSFEDNNVGDACASGRCGGLFLPVDAH CCCEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHCCCCCCEEEEECCC PGLILRPDNGKAWRPRFQAFDSTFGLEPTDVVCLHANSQQGCFGGQPGNPLFDDTQSYWV CCEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEC PPDPSLNHSGWSSVIVPNTGTTIRVVGTSAQGDFMQVVVAPKR CCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEEECCC >Mature Secondary Structure MRTSRTTTLALLAALALAPSAAFAASDEPQLPDVAATTDNPSHPLGDAQAARKAIAIQAK CCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEECCCCCCCCCCCHHHHHEEEEEEEE LSGKTKGKTHQVARGQYVELERQGEDRIWTVVGEFGEQVNPTYGGTAGPLRNQIPEPDRT ECCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEHHCCCCCCCCCCCCCCHHHCCCCCCCC VDNVTIWAPDFSRAYYEDLLFSDAPGDVSMRNFYKELSSNRYTVNGEVTDWVKVPLNEAN CCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEECCCEEEEEEECCCCCC YGSNYCGGIVCARTWLFVRDAVNAWYNGQIAAGRTVAEINAYLAQYDVWDRYDYDGDGNF CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCC NEPDGYIDHFQAIHAGEGEETGGGAQGDDAIWSHRWYAFYNNIGATGPAFNRYGGIRIGA CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHCCEEEEEECCCCCCCCCHHCCCCEEECC SDFWIGDYTIEPENGGVGVFAHEFGHDLGLPDLYDTSGNTGGAENSTGFWTLYSVGSYGA CCEEEEEEEECCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC SGRPEDGLGTKPIHMSAYEKIFLGWSNYQVVRAGQYASLKLGPAEANTKQAQTLVVLLPD CCCCCCCCCCCCEECCCEEEEEEECCCEEEEEECCEEEEEECCCCCCCCCCEEEEEECCC KIVESEIGTPYAGTYFYHSGSGNGLDHSMTRQVTLPAGASLAAKVKFDIELDWDYAYLTV HHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEEEEEECCEEEEEE NGAPVATNLSSSTNPNGQNFGNGITGSTGGAWVDLTADLSAWAGQTVTLGFRYWTDVAVA CCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHHCCCEEEEEEEHHHHHHHH EAGLSIDDVAISGQPLDGAETDPGWTYDGFVRTNGTLATPFFNAYFAEYRQYRGYDQSLK HCCCCEEEEEECCCCCCCCCCCCCCEECCEEEECCEEECHHHHHHHHHHHHHCCCCCCCC TGPYTFGYLNDPTLQNWVDHFPYQDGLLVWYYDTSFEDNNVGDACASGRCGGLFLPVDAH CCCEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHCCCCCCEEEEECCC PGLILRPDNGKAWRPRFQAFDSTFGLEPTDVVCLHANSQQGCFGGQPGNPLFDDTQSYWV CCEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEC PPDPSLNHSGWSSVIVPNTGTTIRVVGTSAQGDFMQVVVAPKR CCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2089225; 6421577 [H]