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The map label for this gene is ahpD

Identifier: 220915457

GI number: 220915457

Start: 376093

End: 376653

Strand: Direct

Name: ahpD

Synonym: A2cp1_0336

Alternate gene names: 220915457

Gene position: 376093-376653 (Clockwise)

Preceding gene: 220915456

Following gene: 220915459

Centisome position: 7.48

GC content: 75.58

Gene sequence:

>561_bases
ATGGCCGCCCTCGACGCGATCCGGGAGGCGCTCCCCGAGCCGGCCCGGGACATCAAGCTGAACCTGCAGGCGGTGCTGCA
GCCCGGGACGCTCACCCCGGCGCAGCGCTGGGGCGTCGCGGTGGCGACGGCCGCGGCGGCCCGCAACGAGCGGCTGCTCG
CGGCGGCCCTCGCCGACGCGCGGGCGGAGGTCGAGCCCGCCGTCATCGAGGACGCGCTCGCGGCCGCGGCGGTGATGGCG
ATGAACAACGTGTACTACCGGTTCCGCCACATGGTCGGGAAGGCGTCGTACGCGGAGAAGCCGGCGCGCCTGCGCATGAA
CCGGCTGGTGAAGCCGGCCGCGAGCAAGGTGGACTTCGAGCTCTTCGCGCTCGCGGTCAGCGCGGTGAACGGGTGCGAGA
CGTGCGTGCGCTCGCACGAGCAGGTGGTGGTCGCCGGCGGCCTCTCGGAGGACCAGGTCCACGAGGCCGTCCGGATCGCC
GCGGTCCTGCACGCGGCGGCGGTCTCGCTCGAGCTCGCCGGGTACGCCGCGGTCCCGTCCGCGGCGGCCGCGGCCGGGTA
G

Upstream 100 bases:

>100_bases
CGTGGACGAGGTCCTCCGCACGCTCGACGCCCTGCAGACGGACGAGCTCTGCCCCTGCAACTGGAAGAAGGGCGAGTCCA
CGCTCCAGGTGGCCTGAGCC

Downstream 100 bases:

>100_bases
GCTACGCGGCCCGGAAGTACCCCGCCGCCTCCGTCGCGAGGAGGGTGGCGCGGGCGACGGACTCCGCCTCGCGGCGGCAT
GCGTCCGCCCGGACCGGATC

Product: alkylhydroperoxidase like protein

Products: NA

Alternate protein names: Alkylhydroperoxidase AhpD

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MAALDAIREALPEPARDIKLNLQAVLQPGTLTPAQRWGVAVATAAAARNERLLAAALADARAEVEPAVIEDALAAAAVMA
MNNVYYRFRHMVGKASYAEKPARLRMNRLVKPAASKVDFELFALAVSAVNGCETCVRSHEQVVVAGGLSEDQVHEAVRIA
AVLHAAAVSLELAGYAAVPSAAAAAG

Sequences:

>Translated_186_residues
MAALDAIREALPEPARDIKLNLQAVLQPGTLTPAQRWGVAVATAAAARNERLLAAALADARAEVEPAVIEDALAAAAVMA
MNNVYYRFRHMVGKASYAEKPARLRMNRLVKPAASKVDFELFALAVSAVNGCETCVRSHEQVVVAGGLSEDQVHEAVRIA
AVLHAAAVSLELAGYAAVPSAAAAAG
>Mature_185_residues
AALDAIREALPEPARDIKLNLQAVLQPGTLTPAQRWGVAVATAAAARNERLLAAALADARAEVEPAVIEDALAAAAVMAM
NNVYYRFRHMVGKASYAEKPARLRMNRLVKPAASKVDFELFALAVSAVNGCETCVRSHEQVVVAGGLSEDQVHEAVRIAA
VLHAAAVSLELAGYAAVPSAAAAAG

Specific function: Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AhpD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): AHPD_ANAD2 (B8J9Z2)

Other databases:

- EMBL:   CP001359
- RefSeq:   YP_002490761.1
- ProteinModelPortal:   B8J9Z2
- SMR:   B8J9Z2
- GeneID:   7296440
- GenomeReviews:   CP001359_GR
- KEGG:   acp:A2cp1_0336
- HOGENOM:   HBG414634
- ProtClustDB:   CLSK944971
- HAMAP:   MF_01676
- InterPro:   IPR004674
- InterPro:   IPR004675
- InterPro:   IPR003779
- TIGRFAMs:   TIGR00778

Pfam domain/function: PF02627 CMD

EC number: =1.11.1.15

Molecular weight: Translated: 19376; Mature: 19245

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: ACT_SITE 132-132 ACT_SITE 135-135

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALDAIREALPEPARDIKLNLQAVLQPGTLTPAQRWGVAVATAAAARNERLLAAALADA
CHHHHHHHHHCCCCCHHHEEHHHHEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
RAEVEPAVIEDALAAAAVMAMNNVYYRFRHMVGKASYAEKPARLRMNRLVKPAASKVDFE
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LFALAVSAVNGCETCVRSHEQVVVAGGLSEDQVHEAVRIAAVLHAAAVSLELAGYAAVPS
HHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC
AAAAAG
HHHCCC
>Mature Secondary Structure 
AALDAIREALPEPARDIKLNLQAVLQPGTLTPAQRWGVAVATAAAARNERLLAAALADA
HHHHHHHHHCCCCCHHHEEHHHHEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
RAEVEPAVIEDALAAAAVMAMNNVYYRFRHMVGKASYAEKPARLRMNRLVKPAASKVDFE
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LFALAVSAVNGCETCVRSHEQVVVAGGLSEDQVHEAVRIAAVLHAAAVSLELAGYAAVPS
HHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC
AAAAAG
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA