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The map label for this gene is 220915454

Identifier: 220915454

GI number: 220915454

Start: 373713

End: 374492

Strand: Direct

Name: 220915454

Synonym: A2cp1_0333

Alternate gene names: NA

Gene position: 373713-374492 (Clockwise)

Preceding gene: 220915453

Following gene: 220915456

Centisome position: 7.43

GC content: 80.64

Gene sequence:

>780_bases
ATGCAACCCTGGGAGACGGTCGAACGCGCCCGCGCGCCGGACGGCACCGCGCTCGCGCTCGCGCGCCGCGGGGACGAGTG
GGTGATCCGCGCCGCGGGCCACGTGCTCATGTCCTCGCGCGCCCACGGCTCCGAGGAGGCGCTCGCCGCGCTGGCCCTCG
AGCGCTGCGCCCGCCCGCGCGCGGTGCTGCTCGGCGGCGTGGGTCTCGGCTTCACCCTGCGTGCATTGCTCGACCGCCTG
CCGCCCGACGCGAAGGTGGTCGTGGCCGAGCTGGTCCCGGAGCTCGCCGCCTGGAACCGCGGCCCGGTGGCGGACCTCGC
GGCCCGGCCGCTCGACGACCCGCGCGTGCGCCTCCAGCTCGGCGACGTGCTCGCCCGCATCGCCGAGGCGCGCGGCGCCT
ACGACGCGATCCTCCTCGACGTGGACAACGGCCCGTCCGCGCTCGCGCACGGCGCCAACCACCGCCTCTACGGCGAGGCG
GGGATCCGCGCCTGCCGCGCGGCGCTGCGCCAGGGCGGCGTGCTCGCGGTCTGGTCGGCCGGGCCGGACGAGCGGTACCT
GGCGCGGCTCGAGCGCGCCGGCCTCGACGCCCGCGCGGTGACGGTCCCGGCGCGCGGCCCGGCCACGCAGGGCGGCGGCG
GGGGCGGCGTGCGGCACGTGGTGTTCCTCGCGACCGCGCCGGCCCAGGGCGGCGGCGCACGCAGGCCCGGCTCACCGTCC
CGCGACGGAGGCGCCGGACGCCGGCCCGGACCTCACGCCCGCGGCGCGCGCGGCCGCTGA

Upstream 100 bases:

>100_bases
AACTGGGGCATCGGCGGGGAGTCGGTCACGGTCCGCCGCAAGCGCGGGAGCTGACGCGCGCTGCGGCCCCCCCGCCGGCG
GCGACGCGAGGAATCGAGCC

Downstream 100 bases:

>100_bases
CGCTCGGATCCCGCCGCCCGGCCCGCGGGCGCCGGGTACGCCGCCTTCACGGTGCCGGCGAGCCGCCGCAGCGCCTCGGC
GATGGGCGAGCTGCGGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MQPWETVERARAPDGTALALARRGDEWVIRAAGHVLMSSRAHGSEEALAALALERCARPRAVLLGGVGLGFTLRALLDRL
PPDAKVVVAELVPELAAWNRGPVADLAARPLDDPRVRLQLGDVLARIAEARGAYDAILLDVDNGPSALAHGANHRLYGEA
GIRACRAALRQGGVLAVWSAGPDERYLARLERAGLDARAVTVPARGPATQGGGGGGVRHVVFLATAPAQGGGARRPGSPS
RDGGAGRRPGPHARGARGR

Sequences:

>Translated_259_residues
MQPWETVERARAPDGTALALARRGDEWVIRAAGHVLMSSRAHGSEEALAALALERCARPRAVLLGGVGLGFTLRALLDRL
PPDAKVVVAELVPELAAWNRGPVADLAARPLDDPRVRLQLGDVLARIAEARGAYDAILLDVDNGPSALAHGANHRLYGEA
GIRACRAALRQGGVLAVWSAGPDERYLARLERAGLDARAVTVPARGPATQGGGGGGVRHVVFLATAPAQGGGARRPGSPS
RDGGAGRRPGPHARGARGR
>Mature_259_residues
MQPWETVERARAPDGTALALARRGDEWVIRAAGHVLMSSRAHGSEEALAALALERCARPRAVLLGGVGLGFTLRALLDRL
PPDAKVVVAELVPELAAWNRGPVADLAARPLDDPRVRLQLGDVLARIAEARGAYDAILLDVDNGPSALAHGANHRLYGEA
GIRACRAALRQGGVLAVWSAGPDERYLARLERAGLDARAVTVPARGPATQGGGGGGVRHVVFLATAPAQGGGARRPGSPS
RDGGAGRRPGPHARGARGR

Specific function: Unknown

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26908; Mature: 26908

Theoretical pI: Translated: 11.51; Mature: 11.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPWETVERARAPDGTALALARRGDEWVIRAAGHVLMSSRAHGSEEALAALALERCARPR
CCCHHHHHHHCCCCCCEEEEECCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
AVLLGGVGLGFTLRALLDRLPPDAKVVVAELVPELAAWNRGPVADLAARPLDDPRVRLQL
EEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHH
GDVLARIAEARGAYDAILLDVDNGPSALAHGANHRLYGEAGIRACRAALRQGGVLAVWSA
HHHHHHHHHHCCCEEEEEEECCCCCHHHHCCCCCEEECHHHHHHHHHHHHCCCEEEEECC
GPDERYLARLERAGLDARAVTVPARGPATQGGGGGGVRHVVFLATAPAQGGGARRPGSPS
CCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCC
RDGGAGRRPGPHARGARGR
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQPWETVERARAPDGTALALARRGDEWVIRAAGHVLMSSRAHGSEEALAALALERCARPR
CCCHHHHHHHCCCCCCEEEEECCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
AVLLGGVGLGFTLRALLDRLPPDAKVVVAELVPELAAWNRGPVADLAARPLDDPRVRLQL
EEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHH
GDVLARIAEARGAYDAILLDVDNGPSALAHGANHRLYGEAGIRACRAALRQGGVLAVWSA
HHHHHHHHHHCCCEEEEEEECCCCCHHHHCCCCCEEECHHHHHHHHHHHHCCCEEEEECC
GPDERYLARLERAGLDARAVTVPARGPATQGGGGGGVRHVVFLATAPAQGGGARRPGSPS
CCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCC
RDGGAGRRPGPHARGARGR
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA