| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is yjiJ [H]
Identifier: 220915451
GI number: 220915451
Start: 371231
End: 372415
Strand: Direct
Name: yjiJ [H]
Synonym: A2cp1_0330
Alternate gene names: 220915451
Gene position: 371231-372415 (Clockwise)
Preceding gene: 220915450
Following gene: 220915453
Centisome position: 7.38
GC content: 78.48
Gene sequence:
>1185_bases GTGAGCGCCGCCACGCGCCGCGCGGTCGCCGGCGCGCTCGCCCTCGCCGCCGCGATGGGCATCGGACGGTTCGCGTACAC GGCGCTGCTGCCCGGGGTGCAGCACGGGCTCGGGTTCGACGACGCCGCCGGCGGGGCCATCGCCTCGGCCAACCTGGTCG GCTACCTCGCGGGCGTGCTCTGGGCGCGGCGCCTGGCCGGGAGCCCGCGGCGGGGCGCGGCGCTGCGGCTCGGGCCCGCG GCGACCGCGGTGCTCACCGCGGCGGTGACCGGGGTCGGCTCGGAGGCGGGGTGGGCCGCGGTGCGCTTCGGCTCCGGCGT CGCGAGCGGGCTCGTGTTCGTGCTCGCATCCGCGGCGGCGCTGGAGGTCCCGCCCGACCATCTCCCCCGACCTCTCCCCC GACCCGGAGTACTTTACGGCGGGGTGGGCGTCGGGATCGCGCTGGCGGCGGTGGTCGCGGCGCTGGCGCCACCCGGCGGG GGCTGGCGCGTGCCGTGGTGGGCGCTGGGAGGCGCGGCGGCTGCCCTGGCGGCGCCGGCGTGGAGCGTCCTCTCCGGCCC CCTCGCGAACGACTCTGGGTCGGGGGGAGGCGTCGCGGCGGGAAGGGGCCGCGCGCCGGTCGGCTTCGGCCGGCTCGCGA CCGCGTACTTCCTCGAGGGGCTGGGCTACATCGTGAGCGGCACGTTCGCCGTGGCGGCGGTCCGGCGAACCCCTGGGCTG GAGGGCCTGGCGCCGTGGACGTGGGCGTTGGCGGGCCTCGCGGCCGCGCCTTCTGCGCTCCTCTGGGCCGCGCTCGGGCG CCGGGTCGGGGTCCGGTCGGCGCTGATCACCGCGCACCTCGTCCAGGCGGCGGGCATGGCGCTCCCATCGCTGTCCTCCG CAGCGTGGGCCGCGCTCGCCGGCGCGGCGCTGTTCGGAGGAACGTTCATCGGGATCACCACGCTGACCGTGGCGGCCGCG CGCGAGATCCGCCCGCAGGCGCTGGGGCGCGCGGTGGGAACGCTCACCGCCATCTACGGGGTCGGGCAGATCGTCGGTCC GCTGGCAGCCGGAGCCGTCGCGCAGCGCTTGGGGGACCCGAGGCCCGCCGTCCTCGGCGCGTCCGCCGCCGTCGCCATCG GGGCCCTCGTCCTCCTCATCCCCTCGCGTGCATCGCTGGCGTCGAGAACGGAACCGAACGCGTGA
Upstream 100 bases:
>100_bases GGGCGCTCGAGGCGAACCCGAAGCTCGCCGCGCAGGCGCGCACCGACGCGGACCTGGCCGCCCTCCGCGGCGACGCGGGG TTCGAGAAGCTGGTCCGGTA
Downstream 100 bases:
>100_bases GCGCGACGACGGCGCGCGCTACCCGGGCGCGCAGCGCACGCCATGTGCCACACGCAGCCAGTACGTGCCGTTCGGGAACA CCACGTCGCGTAGCCCGGCG
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MSAATRRAVAGALALAAAMGIGRFAYTALLPGVQHGLGFDDAAGGAIASANLVGYLAGVLWARRLAGSPRRGAALRLGPA ATAVLTAAVTGVGSEAGWAAVRFGSGVASGLVFVLASAAALEVPPDHLPRPLPRPGVLYGGVGVGIALAAVVAALAPPGG GWRVPWWALGGAAAALAAPAWSVLSGPLANDSGSGGGVAAGRGRAPVGFGRLATAYFLEGLGYIVSGTFAVAAVRRTPGL EGLAPWTWALAGLAAAPSALLWAALGRRVGVRSALITAHLVQAAGMALPSLSSAAWAALAGAALFGGTFIGITTLTVAAA REIRPQALGRAVGTLTAIYGVGQIVGPLAAGAVAQRLGDPRPAVLGASAAVAIGALVLLIPSRASLASRTEPNA
Sequences:
>Translated_394_residues MSAATRRAVAGALALAAAMGIGRFAYTALLPGVQHGLGFDDAAGGAIASANLVGYLAGVLWARRLAGSPRRGAALRLGPA ATAVLTAAVTGVGSEAGWAAVRFGSGVASGLVFVLASAAALEVPPDHLPRPLPRPGVLYGGVGVGIALAAVVAALAPPGG GWRVPWWALGGAAAALAAPAWSVLSGPLANDSGSGGGVAAGRGRAPVGFGRLATAYFLEGLGYIVSGTFAVAAVRRTPGL EGLAPWTWALAGLAAAPSALLWAALGRRVGVRSALITAHLVQAAGMALPSLSSAAWAALAGAALFGGTFIGITTLTVAAA REIRPQALGRAVGTLTAIYGVGQIVGPLAAGAVAQRLGDPRPAVLGASAAVAIGALVLLIPSRASLASRTEPNA >Mature_393_residues SAATRRAVAGALALAAAMGIGRFAYTALLPGVQHGLGFDDAAGGAIASANLVGYLAGVLWARRLAGSPRRGAALRLGPAA TAVLTAAVTGVGSEAGWAAVRFGSGVASGLVFVLASAAALEVPPDHLPRPLPRPGVLYGGVGVGIALAAVVAALAPPGGG WRVPWWALGGAAAALAAPAWSVLSGPLANDSGSGGGVAAGRGRAPVGFGRLATAYFLEGLGYIVSGTFAVAAVRRTPGLE GLAPWTWALAGLAAAPSALLWAALGRRVGVRSALITAHLVQAAGMALPSLSSAAWAALAGAALFGGTFIGITTLTVAAAR EIRPQALGRAVGTLTAIYGVGQIVGPLAAGAVAQRLGDPRPAVLGASAAVAIGALVLLIPSRASLASRTEPNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790788, Length=346, Percent_Identity=30.635838150289, Blast_Score=86, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010645 - InterPro: IPR016196 [H]
Pfam domain/function: PF06779 DUF1228 [H]
EC number: NA
Molecular weight: Translated: 38318; Mature: 38187
Theoretical pI: Translated: 12.20; Mature: 12.20
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAATRRAVAGALALAAAMGIGRFAYTALLPGVQHGLGFDDAAGGAIASANLVGYLAGVL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH WARRLAGSPRRGAALRLGPAATAVLTAAVTGVGSEAGWAAVRFGSGVASGLVFVLASAAA HHHHHCCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHH LEVPPDHLPRPLPRPGVLYGGVGVGIALAAVVAALAPPGGGWRVPWWALGGAAAALAAPA CCCCHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH WSVLSGPLANDSGSGGGVAAGRGRAPVGFGRLATAYFLEGLGYIVSGTFAVAAVRRTPGL HHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EGLAPWTWALAGLAAAPSALLWAALGRRVGVRSALITAHLVQAAGMALPSLSSAAWAALA CCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH GAALFGGTFIGITTLTVAAAREIRPQALGRAVGTLTAIYGVGQIVGPLAAGAVAQRLGDP HHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RPAVLGASAAVAIGALVLLIPSRASLASRTEPNA CCHHHCCHHHHHHHHHHHHCCCCHHHHCCCCCCC >Mature Secondary Structure SAATRRAVAGALALAAAMGIGRFAYTALLPGVQHGLGFDDAAGGAIASANLVGYLAGVL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH WARRLAGSPRRGAALRLGPAATAVLTAAVTGVGSEAGWAAVRFGSGVASGLVFVLASAAA HHHHHCCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHH LEVPPDHLPRPLPRPGVLYGGVGVGIALAAVVAALAPPGGGWRVPWWALGGAAAALAAPA CCCCHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH WSVLSGPLANDSGSGGGVAAGRGRAPVGFGRLATAYFLEGLGYIVSGTFAVAAVRRTPGL HHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EGLAPWTWALAGLAAAPSALLWAALGRRVGVRSALITAHLVQAAGMALPSLSSAAWAALA CCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH GAALFGGTFIGITTLTVAAAREIRPQALGRAVGTLTAIYGVGQIVGPLAAGAVAQRLGDP HHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RPAVLGASAAVAIGALVLLIPSRASLASRTEPNA CCHHHCCHHHHHHHHHHHHCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]