| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220915386
Identifier: 220915386
GI number: 220915386
Start: 293406
End: 295478
Strand: Direct
Name: 220915386
Synonym: A2cp1_0265
Alternate gene names: NA
Gene position: 293406-295478 (Clockwise)
Preceding gene: 220915381
Following gene: 220915388
Centisome position: 5.83
GC content: 70.04
Gene sequence:
>2073_bases ATGGCAGAGCCGAGCACGGTGGTGAAGCCCGAGGTGGAGCAGAAGGAGTTCAGGCCGTACATCGGCGCGGATCGAACGCT CCCCGAGTTCACCCCGAAGGCGGTGCTGCTGGGCGCGCTGTTCGGGATCCTGTTCGGCGCCGCCACGGTCTACCTGGCGC TCAAGGCGGGCCTCACCGTCTCCGCCTCCATCCCGGTCGCGGTCATCGCCATCTCGCTGGGCCGGAAGGTCTTCAAGACC TCCATCCTCGAGAACAACATCATCCAGACCACCGGGTCGGCGGGCGAGTCGATCGCGGCGGGCGTGGTGTTCACGCTCCC GGGCTTCCTGTTCCTCTCGGCGGGCCCCGGCGGCTCGTCGGTGGGCGCGGGCTACTTCAGCTACGTCACGCTGTTCACGC TCTCGCTGGTGGGCGGCATCCTGGGCGTCCTCATGATGATCCCGCTGCGGCGGTCGCTCATCGTGAAGGAGCACGGGCAG CTGGTCTACCCGGAGGGCACGGCCTGCGCCTCGGTGCTCATCGCGGGCGACAAGGGCGGCGACTTCGCGAAGACGGCGTT CCAGGGCGTGGGGTTCGCGCTCGGGTACGCGCTCCTGCAGAAGGTCTTCCACGTCATCGCCGAGACGCCGGCCTGGGTGA CGAAGCAGACGAACAAGTGGCTGCCGAACGCCACCGTGAACGGCGAGATCACGCCGGAGTACCTGGGCGTCGGCTACATC ATCGGGCCGCGCATCGCGGGCGTGCTGGTGGCGGGCGGCGTGCTGGCGTGGCTGGGGCTCATCCCGCTGCTGTCGGTGCT GGTGCCGGGCGAGGTCATCGCGCGGCAGCTCGTCAAGGTGGGCGCGAGCCCGGAGGGCTTCGGGTTCGACGCGGCGGCGG GTACGTTCGCGAACCTACCGCGCGCGGTGTACCTCGCCTACATCCGCCAGATCGGCGCGGGCGCGGTGGCGGCGGCGGGC TTCATCACGCTGCTCAAGACGTTCCCGACCATCGTCAGCTCGCTGCGGGACTCGATCCGCTCGCTGGGCGACAAGGCGGG GGCGGCGTCGGTGTCGCGCACCGAGCGCGACCTCTCGTTCGTGACGGTGATCGTCGGCTCGATCGCGCTGGTGGTGCTGC TGGTGGCGCTGCCGCAGGTGCCGGGCGACACGGTCCTCAACAAGCTGCTCACGGCGGTGCTCATCATCGCCTTCGGCTTC ATCTTCGTGACGGTGTCCTCGCGCATCGTGGGCATCATCGGCTCCTCCTCCAACCCGATCTCGGGCATGACCATCGCGAC GCTCATGGCGACGGCCATGGTGTTCGTCTCGGTGGGCTGGACGGGCGCGGCCTACGAGCCGATGGCGCTGGTGGTGGGCG GCATGGTCTGCATCGCGGCCGCGAACGGCGGCGCGACCTCGCAGGACCTGAAGACGGGCTACCTGGTGGGCGCGACGCCG CGCGCGCAGCAGCTGGCGCTGTTCGTGGGCGCGATCGCCTCGGCGACGGTCATCGGCGTGACGGTGAAGGTGCTCGACAC CCCGACGGCGCGCATGATCTCCGAGGGCATCACCGAGCACGCCATCGGCTCCTCCTACTTCCCGGCCCCGCAGGCGACGC TCATGGCGACGCTCATCAAGGGCCTGCTCTCGCTCAACCTCGACTGGCACTTCGTGCTGGTGGGCGCGTTCATCGCCATC ACCATGGAGCTGTGCGGCGTGAAGTCGCTCTCCTTCGCGGTGGGCCTGTACCTCCCGCTCTCCACCACGCTCCCCATCTT CGTGGGCGGCGCGCTGAAGGGCGTGGCGGACTTCGTGTCCCGCCGCAAGGGCGGCGCGGGCGAGGAGGGCGAGCTGGGCA GCGGCAGCCTGTTCGCGACGGGCCTGGTGGCGGGCGGCGCGCTGTTCGGCGTCATCGTCGCCTTCCTGCAGGTGTTCGCG GAGGGCACCATGAAGACGCTCGACCTGCAGGAGTCGATCGTCCACGCGATCGGGTCCACGGGGTACGCGGTGCTGGGCGT CGTCTTCTTCGCGGCGCTGGCCGCGGTGCTCTACCGCGCGGCGCGGAAGCCGCAACCGGGGCTGGAGGCCTAG
Upstream 100 bases:
>100_bases GCGGCGAAAGGCCCGCGCGGGGGGTTCCCGGTTGTCGACATCGGCGGGCGGACGTGGTTTTCTCCCGCCGCAACGCGGAA CCCCAGCACCGAGGAGACGC
Downstream 100 bases:
>100_bases TCCTCCGCCGCGGGGGCCGCGGCGGTCCGGCGGGGCTCGCCGGGACTTGCGTTCGGGCTGATGGGGTGGCGTGGCCGCGG GGGCCGGTCCCGGGGGGATC
Product: oligopeptide transporter, OPT family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 690; Mature: 689
Protein sequence:
>690_residues MAEPSTVVKPEVEQKEFRPYIGADRTLPEFTPKAVLLGALFGILFGAATVYLALKAGLTVSASIPVAVIAISLGRKVFKT SILENNIIQTTGSAGESIAAGVVFTLPGFLFLSAGPGGSSVGAGYFSYVTLFTLSLVGGILGVLMMIPLRRSLIVKEHGQ LVYPEGTACASVLIAGDKGGDFAKTAFQGVGFALGYALLQKVFHVIAETPAWVTKQTNKWLPNATVNGEITPEYLGVGYI IGPRIAGVLVAGGVLAWLGLIPLLSVLVPGEVIARQLVKVGASPEGFGFDAAAGTFANLPRAVYLAYIRQIGAGAVAAAG FITLLKTFPTIVSSLRDSIRSLGDKAGAASVSRTERDLSFVTVIVGSIALVVLLVALPQVPGDTVLNKLLTAVLIIAFGF IFVTVSSRIVGIIGSSSNPISGMTIATLMATAMVFVSVGWTGAAYEPMALVVGGMVCIAAANGGATSQDLKTGYLVGATP RAQQLALFVGAIASATVIGVTVKVLDTPTARMISEGITEHAIGSSYFPAPQATLMATLIKGLLSLNLDWHFVLVGAFIAI TMELCGVKSLSFAVGLYLPLSTTLPIFVGGALKGVADFVSRRKGGAGEEGELGSGSLFATGLVAGGALFGVIVAFLQVFA EGTMKTLDLQESIVHAIGSTGYAVLGVVFFAALAAVLYRAARKPQPGLEA
Sequences:
>Translated_690_residues MAEPSTVVKPEVEQKEFRPYIGADRTLPEFTPKAVLLGALFGILFGAATVYLALKAGLTVSASIPVAVIAISLGRKVFKT SILENNIIQTTGSAGESIAAGVVFTLPGFLFLSAGPGGSSVGAGYFSYVTLFTLSLVGGILGVLMMIPLRRSLIVKEHGQ LVYPEGTACASVLIAGDKGGDFAKTAFQGVGFALGYALLQKVFHVIAETPAWVTKQTNKWLPNATVNGEITPEYLGVGYI IGPRIAGVLVAGGVLAWLGLIPLLSVLVPGEVIARQLVKVGASPEGFGFDAAAGTFANLPRAVYLAYIRQIGAGAVAAAG FITLLKTFPTIVSSLRDSIRSLGDKAGAASVSRTERDLSFVTVIVGSIALVVLLVALPQVPGDTVLNKLLTAVLIIAFGF IFVTVSSRIVGIIGSSSNPISGMTIATLMATAMVFVSVGWTGAAYEPMALVVGGMVCIAAANGGATSQDLKTGYLVGATP RAQQLALFVGAIASATVIGVTVKVLDTPTARMISEGITEHAIGSSYFPAPQATLMATLIKGLLSLNLDWHFVLVGAFIAI TMELCGVKSLSFAVGLYLPLSTTLPIFVGGALKGVADFVSRRKGGAGEEGELGSGSLFATGLVAGGALFGVIVAFLQVFA EGTMKTLDLQESIVHAIGSTGYAVLGVVFFAALAAVLYRAARKPQPGLEA >Mature_689_residues AEPSTVVKPEVEQKEFRPYIGADRTLPEFTPKAVLLGALFGILFGAATVYLALKAGLTVSASIPVAVIAISLGRKVFKTS ILENNIIQTTGSAGESIAAGVVFTLPGFLFLSAGPGGSSVGAGYFSYVTLFTLSLVGGILGVLMMIPLRRSLIVKEHGQL VYPEGTACASVLIAGDKGGDFAKTAFQGVGFALGYALLQKVFHVIAETPAWVTKQTNKWLPNATVNGEITPEYLGVGYII GPRIAGVLVAGGVLAWLGLIPLLSVLVPGEVIARQLVKVGASPEGFGFDAAAGTFANLPRAVYLAYIRQIGAGAVAAAGF ITLLKTFPTIVSSLRDSIRSLGDKAGAASVSRTERDLSFVTVIVGSIALVVLLVALPQVPGDTVLNKLLTAVLIIAFGFI FVTVSSRIVGIIGSSSNPISGMTIATLMATAMVFVSVGWTGAAYEPMALVVGGMVCIAAANGGATSQDLKTGYLVGATPR AQQLALFVGAIASATVIGVTVKVLDTPTARMISEGITEHAIGSSYFPAPQATLMATLIKGLLSLNLDWHFVLVGAFIAIT MELCGVKSLSFAVGLYLPLSTTLPIFVGGALKGVADFVSRRKGGAGEEGELGSGSLFATGLVAGGALFGVIVAFLQVFAE GTMKTLDLQESIVHAIGSTGYAVLGVVFFAALAAVLYRAARKPQPGLEA
Specific function: Unknown
COG id: COG1297
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oligopeptide OPT transporter family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004814 - InterPro: IPR004813 [H]
Pfam domain/function: PF03169 OPT [H]
EC number: NA
Molecular weight: Translated: 70907; Mature: 70776
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPSTVVKPEVEQKEFRPYIGADRTLPEFTPKAVLLGALFGILFGAATVYLALKAGLTV CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEE SASIPVAVIAISLGRKVFKTSILENNIIQTTGSAGESIAAGVVFTLPGFLFLSAGPGGSS ECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCC VGAGYFSYVTLFTLSLVGGILGVLMMIPLRRSLIVKEHGQLVYPEGTACASVLIAGDKGG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEEECCCCC DFAKTAFQGVGFALGYALLQKVFHVIAETPAWVTKQTNKWLPNATVNGEITPEYLGVGYI CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHHHCCCEE IGPRIAGVLVAGGVLAWLGLIPLLSVLVPGEVIARQLVKVGASPEGFGFDAAAGTFANLP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCH RAVYLAYIRQIGAGAVAAAGFITLLKTFPTIVSSLRDSIRSLGDKAGAASVSRTERDLSF HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VTVIVGSIALVVLLVALPQVPGDTVLNKLLTAVLIIAFGFIFVTVSSRIVGIIGSSSNPI HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC SGMTIATLMATAMVFVSVGWTGAAYEPMALVVGGMVCIAAANGGATSQDLKTGYLVGATP CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHEEEECCCCCCCCCCCCCEEECCCC RAQQLALFVGAIASATVIGVTVKVLDTPTARMISEGITEHAIGSSYFPAPQATLMATLIK CHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHH GLLSLNLDWHFVLVGAFIAITMELCGVKSLSFAVGLYLPLSTTLPIFVGGALKGVADFVS HHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHH RRKGGAGEEGELGSGSLFATGLVAGGALFGVIVAFLQVFAEGTMKTLDLQESIVHAIGST HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC GYAVLGVVFFAALAAVLYRAARKPQPGLEA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AEPSTVVKPEVEQKEFRPYIGADRTLPEFTPKAVLLGALFGILFGAATVYLALKAGLTV CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEE SASIPVAVIAISLGRKVFKTSILENNIIQTTGSAGESIAAGVVFTLPGFLFLSAGPGGSS ECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCC VGAGYFSYVTLFTLSLVGGILGVLMMIPLRRSLIVKEHGQLVYPEGTACASVLIAGDKGG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEEECCCCC DFAKTAFQGVGFALGYALLQKVFHVIAETPAWVTKQTNKWLPNATVNGEITPEYLGVGYI CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHHHCCCEE IGPRIAGVLVAGGVLAWLGLIPLLSVLVPGEVIARQLVKVGASPEGFGFDAAAGTFANLP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCH RAVYLAYIRQIGAGAVAAAGFITLLKTFPTIVSSLRDSIRSLGDKAGAASVSRTERDLSF HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VTVIVGSIALVVLLVALPQVPGDTVLNKLLTAVLIIAFGFIFVTVSSRIVGIIGSSSNPI HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC SGMTIATLMATAMVFVSVGWTGAAYEPMALVVGGMVCIAAANGGATSQDLKTGYLVGATP CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHEEEECCCCCCCCCCCCCEEECCCC RAQQLALFVGAIASATVIGVTVKVLDTPTARMISEGITEHAIGSSYFPAPQATLMATLIK CHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHH GLLSLNLDWHFVLVGAFIAITMELCGVKSLSFAVGLYLPLSTTLPIFVGGALKGVADFVS HHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHH RRKGGAGEEGELGSGSLFATGLVAGGALFGVIVAFLQVFAEGTMKTLDLQESIVHAIGST HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC GYAVLGVVFFAALAAVLYRAARKPQPGLEA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]