| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220915338
Identifier: 220915338
GI number: 220915338
Start: 234478
End: 235293
Strand: Direct
Name: 220915338
Synonym: A2cp1_0217
Alternate gene names: NA
Gene position: 234478-235293 (Clockwise)
Preceding gene: 220915337
Following gene: 220915341
Centisome position: 4.66
GC content: 78.31
Gene sequence:
>816_bases ATGACCGACCGAAGCCGCCGAGCCCGCCCCGCCGCCCCACGCCCGCCGCCGCACGACCGCCACGTCCTGTACGAGCGCGC CGTCCAGCACGCCGACAGCGAGCTCGACCTGGTGGACCGGGCGGTGCGCCGCGGCGGGGGGACGCCGCGGCGGCTGCGCG AGGACTTCAGCGGCACCGCGCTGCTCTCCGCGGCCTGGGTCCGGCGCGGCCGGGATCGCAGCGCGGTGGCGGTGGACCTC GACGCCGCGGTGCACGCCTGGGCGCGCGCCCACCGGGTGCCCGGCCTGGGCGCGGCCGCGGCGCGGCTGCGGCTGGTGGA GGCCGACGTGCGCGAGGGGCCGCCGGGGCCGTTCGACGCGGTGATCGCGTTCAACTTCAGCTACGGCGTGCTCCAGACGC GCGAGGCGCTCGGCGCCTACCTGACGGCGGCGGCCGGCGCGCTGGCGCCCCGCGGCGCGCTGCTCCTCGACGCGTACGGC GGCTGGGACGCCGAGAAGGAGCTGGTGGAGCGGCGGCGCATCGGCGGCGGCGTGAGCTACGTGTGGGAGCAGGAGTCGTT CGATCCCATCACCCGCCGGGTCCGCTGCGCCATCCACTTCGAGCTGCCCGGCGGCCGGCGCCTGCGCCGCGCGTTCACCT ACGACTGGCGGCTCTGGACCGTCCCGGAGCTCACCGAGCTGATGCGCGAGGCGGGGCTCGAGCCGGAGGTGCTGTGGGAC GTGGCGCCGCGGGGCGCGACCCGCTACGTGCCGCGCCGCTCCGCCTCGAACCAGGGCGGGTGGATCGCGTACGTGGTGGG GCGGCGGCGGCCCTAG
Upstream 100 bases:
>100_bases TCCGAGATGGACCCGCTCACCTTCAAGCTGACGAACCCCGAGCCGTTCCTGCTGCGGCGGCCTTGACCTGCCCGCGCCGT GGCATAGTGCGCCTCCGCGC
Downstream 100 bases:
>100_bases CGCTCCGGCGGGCCGACGAGCGCAGCCTCGACCGCGCGGAAGTCCTCGGGCGGCTCGGCCTCGAACACCATCCGCGCGCC GGTGGCCGGATGCGGCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MTDRSRRARPAAPRPPPHDRHVLYERAVQHADSELDLVDRAVRRGGGTPRRLREDFSGTALLSAAWVRRGRDRSAVAVDL DAAVHAWARAHRVPGLGAAAARLRLVEADVREGPPGPFDAVIAFNFSYGVLQTREALGAYLTAAAGALAPRGALLLDAYG GWDAEKELVERRRIGGGVSYVWEQESFDPITRRVRCAIHFELPGGRRLRRAFTYDWRLWTVPELTELMREAGLEPEVLWD VAPRGATRYVPRRSASNQGGWIAYVVGRRRP
Sequences:
>Translated_271_residues MTDRSRRARPAAPRPPPHDRHVLYERAVQHADSELDLVDRAVRRGGGTPRRLREDFSGTALLSAAWVRRGRDRSAVAVDL DAAVHAWARAHRVPGLGAAAARLRLVEADVREGPPGPFDAVIAFNFSYGVLQTREALGAYLTAAAGALAPRGALLLDAYG GWDAEKELVERRRIGGGVSYVWEQESFDPITRRVRCAIHFELPGGRRLRRAFTYDWRLWTVPELTELMREAGLEPEVLWD VAPRGATRYVPRRSASNQGGWIAYVVGRRRP >Mature_270_residues TDRSRRARPAAPRPPPHDRHVLYERAVQHADSELDLVDRAVRRGGGTPRRLREDFSGTALLSAAWVRRGRDRSAVAVDLD AAVHAWARAHRVPGLGAAAARLRLVEADVREGPPGPFDAVIAFNFSYGVLQTREALGAYLTAAAGALAPRGALLLDAYGG WDAEKELVERRRIGGGVSYVWEQESFDPITRRVRCAIHFELPGGRRLRRAFTYDWRLWTVPELTELMREAGLEPEVLWDV APRGATRYVPRRSASNQGGWIAYVVGRRRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30228; Mature: 30096
Theoretical pI: Translated: 10.99; Mature: 10.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRSRRARPAAPRPPPHDRHVLYERAVQHADSELDLVDRAVRRGGGTPRRLREDFSGTA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHCCCCHH LLSAAWVRRGRDRSAVAVDLDAAVHAWARAHRVPGLGAAAARLRLVEADVREGPPGPFDA HHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHEHHHHCCCCCCCEE VIAFNFSYGVLQTREALGAYLTAAAGALAPRGALLLDAYGGWDAEKELVERRRIGGGVSY EEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEE VWEQESFDPITRRVRCAIHFELPGGRRLRRAFTYDWRLWTVPELTELMREAGLEPEVLWD EECCCCCCHHHHEEEEEEEEECCCCHHHHHHEEECEEEEECHHHHHHHHHCCCCCEEEEE VAPRGATRYVPRRSASNQGGWIAYVVGRRRP CCCCCCCCCCCCCCCCCCCCEEEEEECCCCC >Mature Secondary Structure TDRSRRARPAAPRPPPHDRHVLYERAVQHADSELDLVDRAVRRGGGTPRRLREDFSGTA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHCCCCHH LLSAAWVRRGRDRSAVAVDLDAAVHAWARAHRVPGLGAAAARLRLVEADVREGPPGPFDA HHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHEHHHHCCCCCCCEE VIAFNFSYGVLQTREALGAYLTAAAGALAPRGALLLDAYGGWDAEKELVERRRIGGGVSY EEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEE VWEQESFDPITRRVRCAIHFELPGGRRLRRAFTYDWRLWTVPELTELMREAGLEPEVLWD EECCCCCCHHHHEEEEEEEEECCCCHHHHHHEEECEEEEECHHHHHHHHHCCCCCEEEEE VAPRGATRYVPRRSASNQGGWIAYVVGRRRP CCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA