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The map label for this gene is ygiQ [C]

Identifier: 220915205

GI number: 220915205

Start: 95202

End: 97148

Strand: Direct

Name: ygiQ [C]

Synonym: A2cp1_0084

Alternate gene names: 220915205

Gene position: 95202-97148 (Clockwise)

Preceding gene: 220915203

Following gene: 220915206

Centisome position: 1.89

GC content: 73.39

Gene sequence:

>1947_bases
ATGGCCCGACTTCCCGTGCTCCAGGGCGACCGCGCCCGCCGCCCCGCGCCGCCCGGCCCGGAGGCCTTCCTGCCCATGTT
CCCGGAGCACCTGCGGGCGCGGGGCTGGGCCGACCTGGACGTGCTCCTGGTGAGCGGCGACGCGTACGTCGATCACCCGA
GCTTCGGCGCGGCGGTGATCGGGCGGGTGCTGGAGGCGGCTGGCTACAAGGTGGGCGTGGTGGCGCAGCCGGACTGGCGC
TCGCCGGCCGAGCTCCTGCGGCTGGGGCGGCCGCGGCTGTTCGTCGGGATCACCTCGGGTGCGATGGACTCGATGGTGAA
CCACTACACCGCGCACAAGCGGCGGCGCTCCGAGGACGCGTACACGCCGGACGGCGCCGCCGGCAGGCGGCCGGACCGCG
CCACCACCGTCTACGCGCGGCTGGCGCGCGCGGCGTTCGGGGCCACCACGCCCATCGTGCTGGGCGGCATCGAGGCGTCG
CTCCGCCGGATCGCCCACTACGACTACTGGGACGACCGGGTCCTGCCCTCGGTGCTGGTGCCGTCCGGCGCCGACCTGCT
CGTCTACGGCCAGGGCGAGAAGCCCATCCTGGAGATCGCGCGCCGGCTCGCCTCGGGCGAGGACATCTGCGGCCTCACCG
ACGTGCCCGGCACCGCGCTCGCCGTGCCCGACCTCGGCATGGCGATGCTGGACGGGCGCGATCGGAAGGTGCTGGAGCTG
CCCGCCTACGAGGAGATCGTCCTCGACAAGCGGCGCTTCGCCGAGTTCAGCCGGCTCTACCACCTCGAGCACAACGAGGC
GAACGCGCGCATCCTGGTGCAGCGCCACGGCCGCGGGCCGGCGCAGCGCCACGTGGTGGTGAACCCGCCCATGCGGCCGC
CCTCGACCGAGGAGCTGGACCGGATCGCCGAGCTCCCCTACGTGCGCGAGGCGCACCCGGCCTACGGCGGCGCGCACATC
CCGGCGCTCGAGCAGATCCGCTGGTCGGTCCAGATCCTGCGCGGCTGCGCGGCCGGCTGCGCCTTCTGCTGCATCACGGA
GCACCAGGGGCGGGACATCGCCAGCCGCTCCGAGGCGAGCGTGCTGCGCGAGATCGCGACGCTCGCGAGCAAGGACAGCT
TCCGCGGGACCATCACCGACGTGGGCGGCGCCACCGCCAACATGTGGCGGATGGAGTGCACCAGCGCGGCGGCGCACGCC
GCCTGCCGGCGCGCGAGCTGCGTCTACCCGAGCGTCTGCCAGTTCTTCTCGGTGGACCACGGGCCGCTCGTGGACCTGTA
CGAGAAGGCGCGGAAGGTGCCCGGGGTGAAGCACGTGTTCGTGGGCTCCGGCGTCCGCTACGACCTCGCGCAGGCCGACG
AGAAGAACGGCGCGCGCTACCTCGAGGCGCTCGTCGCGAACCACGTGTCCGGCCAGCTCAAGGTCGCGCCCGAGCACGTC
TGCGAGCCGGTGCTGAAGGTGATGAAGAAGCCCGGGGTCGAGTCGTTCGAGCGCTTCCGCAAGGACTTCGAGCGGTACAC
GAGGAAGGCGGGCAAGGAGCAGTACCTCGTCCCGTACTTCATCTCCTCCCACCCGGGCGCCTCGCTGGAGGAGGCGGCGG
ATCTGATGGAGTACCTGCAGGCGAACCGCTGGAAGCCGCAGCAGGTGCAGGACTTCATGCCCACGCCCATGACGCTCGCC
TCGGACATCTTCTGGTCGGGCTACCACCCGATGACGGGCAAGCCGGTGCACGTCACCCGGGACATGGAGGAGAAGCGCAT
GCAGAAGGCGCTCCTCCGCTGGGGCGATCCGGCGAACCGGCCGCTCATCGAGAAGGCGCTCCGGAAGATCGGCCGGCTGA
GGCCGGGCGAGCGGCTCGGGCCGGGCATGCGCCCGGGCCGGCGCGGCGCGGGGCGGCCCGGGCCGGGCGCGCGCGGCGGG
GCCGGGCCCGGCCGCGGACCGCGGTAG

Upstream 100 bases:

>100_bases
GCCGGCGCTCCGGAGGGCCGGATGATACCTCCGCTCCCCGTCCGCTCAAAGGCGAGGGCGGCTTGCTTTCCCGGGGCCCG
GCGGCCATCTATGTGCGCCG

Downstream 100 bases:

>100_bases
GGCAGCCAGGGCTCCCGAGCGGCGCCCTCACCCCGCGACCCGGATGTGGTAGGGTCCCGTATGCCCCAGATCCGCCTTTT
CCCCGCCGCCGCCCTCCTGT

Product: Radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 648; Mature: 647

Protein sequence:

>648_residues
MARLPVLQGDRARRPAPPGPEAFLPMFPEHLRARGWADLDVLLVSGDAYVDHPSFGAAVIGRVLEAAGYKVGVVAQPDWR
SPAELLRLGRPRLFVGITSGAMDSMVNHYTAHKRRRSEDAYTPDGAAGRRPDRATTVYARLARAAFGATTPIVLGGIEAS
LRRIAHYDYWDDRVLPSVLVPSGADLLVYGQGEKPILEIARRLASGEDICGLTDVPGTALAVPDLGMAMLDGRDRKVLEL
PAYEEIVLDKRRFAEFSRLYHLEHNEANARILVQRHGRGPAQRHVVVNPPMRPPSTEELDRIAELPYVREAHPAYGGAHI
PALEQIRWSVQILRGCAAGCAFCCITEHQGRDIASRSEASVLREIATLASKDSFRGTITDVGGATANMWRMECTSAAAHA
ACRRASCVYPSVCQFFSVDHGPLVDLYEKARKVPGVKHVFVGSGVRYDLAQADEKNGARYLEALVANHVSGQLKVAPEHV
CEPVLKVMKKPGVESFERFRKDFERYTRKAGKEQYLVPYFISSHPGASLEEAADLMEYLQANRWKPQQVQDFMPTPMTLA
SDIFWSGYHPMTGKPVHVTRDMEEKRMQKALLRWGDPANRPLIEKALRKIGRLRPGERLGPGMRPGRRGAGRPGPGARGG
AGPGRGPR

Sequences:

>Translated_648_residues
MARLPVLQGDRARRPAPPGPEAFLPMFPEHLRARGWADLDVLLVSGDAYVDHPSFGAAVIGRVLEAAGYKVGVVAQPDWR
SPAELLRLGRPRLFVGITSGAMDSMVNHYTAHKRRRSEDAYTPDGAAGRRPDRATTVYARLARAAFGATTPIVLGGIEAS
LRRIAHYDYWDDRVLPSVLVPSGADLLVYGQGEKPILEIARRLASGEDICGLTDVPGTALAVPDLGMAMLDGRDRKVLEL
PAYEEIVLDKRRFAEFSRLYHLEHNEANARILVQRHGRGPAQRHVVVNPPMRPPSTEELDRIAELPYVREAHPAYGGAHI
PALEQIRWSVQILRGCAAGCAFCCITEHQGRDIASRSEASVLREIATLASKDSFRGTITDVGGATANMWRMECTSAAAHA
ACRRASCVYPSVCQFFSVDHGPLVDLYEKARKVPGVKHVFVGSGVRYDLAQADEKNGARYLEALVANHVSGQLKVAPEHV
CEPVLKVMKKPGVESFERFRKDFERYTRKAGKEQYLVPYFISSHPGASLEEAADLMEYLQANRWKPQQVQDFMPTPMTLA
SDIFWSGYHPMTGKPVHVTRDMEEKRMQKALLRWGDPANRPLIEKALRKIGRLRPGERLGPGMRPGRRGAGRPGPGARGG
AGPGRGPR
>Mature_647_residues
ARLPVLQGDRARRPAPPGPEAFLPMFPEHLRARGWADLDVLLVSGDAYVDHPSFGAAVIGRVLEAAGYKVGVVAQPDWRS
PAELLRLGRPRLFVGITSGAMDSMVNHYTAHKRRRSEDAYTPDGAAGRRPDRATTVYARLARAAFGATTPIVLGGIEASL
RRIAHYDYWDDRVLPSVLVPSGADLLVYGQGEKPILEIARRLASGEDICGLTDVPGTALAVPDLGMAMLDGRDRKVLELP
AYEEIVLDKRRFAEFSRLYHLEHNEANARILVQRHGRGPAQRHVVVNPPMRPPSTEELDRIAELPYVREAHPAYGGAHIP
ALEQIRWSVQILRGCAAGCAFCCITEHQGRDIASRSEASVLREIATLASKDSFRGTITDVGGATANMWRMECTSAAAHAA
CRRASCVYPSVCQFFSVDHGPLVDLYEKARKVPGVKHVFVGSGVRYDLAQADEKNGARYLEALVANHVSGQLKVAPEHVC
EPVLKVMKKPGVESFERFRKDFERYTRKAGKEQYLVPYFISSHPGASLEEAADLMEYLQANRWKPQQVQDFMPTPMTLAS
DIFWSGYHPMTGKPVHVTRDMEEKRMQKALLRWGDPANRPLIEKALRKIGRLRPGERLGPGMRPGRRGAGRPGPGARGGA
GPGRGPR

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=673, Percent_Identity=44.4279346210996, Blast_Score=580, Evalue=1e-167,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 71428; Mature: 71297

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLPVLQGDRARRPAPPGPEAFLPMFPEHLRARGWADLDVLLVSGDAYVDHPSFGAAVI
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCEECCCCHHHHHH
GRVLEAAGYKVGVVAQPDWRSPAELLRLGRPRLFVGITSGAMDSMVNHYTAHKRRRSEDA
HHHHHHCCCEEEEEECCCCCCHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCC
YTPDGAAGRRPDRATTVYARLARAAFGATTPIVLGGIEASLRRIAHYDYWDDRVLPSVLV
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCCCCHHHCC
PSGADLLVYGQGEKPILEIARRLASGEDICGLTDVPGTALAVPDLGMAMLDGRDRKVLEL
CCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCHHHHCCCCCEEEEC
PAYEEIVLDKRRFAEFSRLYHLEHNEANARILVQRHGRGPAQRHVVVNPPMRPPSTEELD
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCHHHHH
RIAELPYVREAHPAYGGAHIPALEQIRWSVQILRGCAAGCAFCCITEHQGRDIASRSEAS
HHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHH
VLREIATLASKDSFRGTITDVGGATANMWRMECTSAAAHAACRRASCVYPSVCQFFSVDH
HHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC
GPLVDLYEKARKVPGVKHVFVGSGVRYDLAQADEKNGARYLEALVANHVSGQLKVAPEHV
CCHHHHHHHHHHCCCCEEEEECCCCEECHHHCCCCCHHHHHHHHHHHHCCCCEEECHHHH
CEPVLKVMKKPGVESFERFRKDFERYTRKAGKEQYLVPYFISSHPGASLEEAADLMEYLQ
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH
ANRWKPQQVQDFMPTPMTLASDIFWSGYHPMTGKPVHVTRDMEEKRMQKALLRWGDPANR
HCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCC
PLIEKALRKIGRLRPGERLGPGMRPGRRGAGRPGPGARGGAGPGRGPR
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARLPVLQGDRARRPAPPGPEAFLPMFPEHLRARGWADLDVLLVSGDAYVDHPSFGAAVI
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCEECCCCHHHHHH
GRVLEAAGYKVGVVAQPDWRSPAELLRLGRPRLFVGITSGAMDSMVNHYTAHKRRRSEDA
HHHHHHCCCEEEEEECCCCCCHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCC
YTPDGAAGRRPDRATTVYARLARAAFGATTPIVLGGIEASLRRIAHYDYWDDRVLPSVLV
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCCCCHHHCC
PSGADLLVYGQGEKPILEIARRLASGEDICGLTDVPGTALAVPDLGMAMLDGRDRKVLEL
CCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCHHHHCCCCCEEEEC
PAYEEIVLDKRRFAEFSRLYHLEHNEANARILVQRHGRGPAQRHVVVNPPMRPPSTEELD
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCHHHHH
RIAELPYVREAHPAYGGAHIPALEQIRWSVQILRGCAAGCAFCCITEHQGRDIASRSEAS
HHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHH
VLREIATLASKDSFRGTITDVGGATANMWRMECTSAAAHAACRRASCVYPSVCQFFSVDH
HHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC
GPLVDLYEKARKVPGVKHVFVGSGVRYDLAQADEKNGARYLEALVANHVSGQLKVAPEHV
CCHHHHHHHHHHCCCCEEEEECCCCEECHHHCCCCCHHHHHHHHHHHHCCCCEEECHHHH
CEPVLKVMKKPGVESFERFRKDFERYTRKAGKEQYLVPYFISSHPGASLEEAADLMEYLQ
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH
ANRWKPQQVQDFMPTPMTLASDIFWSGYHPMTGKPVHVTRDMEEKRMQKALLRWGDPANR
HCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCC
PLIEKALRKIGRLRPGERLGPGMRPGRRGAGRPGPGARGGAGPGRGPR
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA