| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
Click here to switch to the map view.
The map label for this gene is 220915029
Identifier: 220915029
GI number: 220915029
Start: 403362
End: 404810
Strand: Reverse
Name: 220915029
Synonym: Mnod_8195
Alternate gene names: NA
Gene position: 404810-403362 (Counterclockwise)
Preceding gene: 220915035
Following gene: 220915027
Centisome position: 88.37
GC content: 64.46
Gene sequence:
>1449_bases ATGGGTGTCACCAGACGGATCTTCGCCACAGGCGCCGCTACGATACCGCTCATCGGCTCAGGCTTTCCGCGTGCCTCGGC CCAGAATGCGGCTCAGGACGCGCTCCTCATCGGCAACAACGCTGTGGCGGATCCGCTGGAGTTGGCAACGGACGCCTACA TCTACGGCTACCCGCTCGTCACCATGGAGATGACCCGACGCGTCCTCACCAACGTGGTCGCGCCCGAAGGTAAAAGCGCC CCCATGGGCCAGTTCGCCAATTTGCGGGAATACCCAGACGCCAAATTCCGAGCCGTCACGGCCCCCAATGCGGACACGCT CTATTCCAGCGCCTTCCTCGACGTCGGCCGGGAACCTTATATCCTGAGCATCCCGAACGAGGACGGGCGCTACTTCCTCA TGCCAATGCTCAGTGCCTGGACGAACGTCTTTTCCGTGCCGGGCAAGCGCACAACCGGAACTGGCCCGCAGACCTACTTC ATTGCAGGACCTGGTTGGAGCGGCAGCGTCCCATCCGGCGCCAAGCTGATCCAAGCCCCAACCAGCCTAGTCTGGATCAT CGGCCGAACGTACTGCACGGGTACGCCCGAGGACTACAAGACCGTCCACGCCCTGCAGGACCAGTACCGGCTCATCCCCG CGAGCGCGGCCGCAACGTCGTACACGCCGCCGGCAGGCCAGGTTGATCCAGGCATCGACACCAAGACGGCCGTGCGCGAG CAGGTCAACAATTTGGACGCGGCCACCTACTTCAACTTGCTCGCCGCGCTGATGAAGGATAACCCGCCAGCGCTCGCGGA CGGGGTCGCGGTTGCCAAGATGGCCTCGCTCGGCATCGTGTCTGGGCGCACCTTTGATCCGAGAGGCCTGACACCATCCG TTCGGGAAGCGGTCGAGCAGGCACCGAAGCAGGCCATCTCCCGCATCATGGGACATATGAAGACAACGGGCCGACACATC AACGGCTGGACATTCACGACCGACGGCGGCGATTACGGCAAGGACTACCTGCAGCGCGCGTTGGTCACGGCGGTCGGGCT CGGCTGCAACCTGCCGCAGGACGCGGTTTACCCCCTGACCACCGTCGATGCTGCGGGCCGGCGGCTGGCCGGCACCTCGA AGTACGTGATGCGCTTCCCTGCCGGCGAGCTGCCGCCCGTCGATGGATTCTGGTCGCTGACAATGTATGACGCGAACTTC TTCTTCGTCGACAACCCGCTCAACCGCTATACGGTCAGCCCGCGCAACAACCTGCAGACCAATCCAGACGGCTCAGTCGA TCTCTTCATCCAGACCGAGAGCCCCGGCCCGCAGCGGGAGTCGAACTGGCTACCAGCCCCGACTGGGCCTTTCATCCTGA TGCTGCGCACCTACTGGCCGAAGGATGCGCTGCTGAACGGATCCTGGGCCCCTCCGCCGGTTACGCGCGGCGCCGGCGCG GCGCTCTAG
Upstream 100 bases:
>100_bases GACGCGCCTCGTAGGCGGGCAAGGGTGGGCCCTCCGGTCATCGTGCCGGCGGAACCTGAGCCTTTGACCCAACCCGCATG AGGGGGCATCGGAGGCAGCT
Downstream 100 bases:
>100_bases CCGCCTGACTGCGCCATCAACAACTCGCCCGTTCCCGGTTTGGGCCGGGTGCCCAGCGCAGGCGCTGATGGTCCTGAACG CATTGAAGAGAGACAGGAGG
Product: protein of unknown function DUF1254
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 482; Mature: 481
Protein sequence:
>482_residues MGVTRRIFATGAATIPLIGSGFPRASAQNAAQDALLIGNNAVADPLELATDAYIYGYPLVTMEMTRRVLTNVVAPEGKSA PMGQFANLREYPDAKFRAVTAPNADTLYSSAFLDVGREPYILSIPNEDGRYFLMPMLSAWTNVFSVPGKRTTGTGPQTYF IAGPGWSGSVPSGAKLIQAPTSLVWIIGRTYCTGTPEDYKTVHALQDQYRLIPASAAATSYTPPAGQVDPGIDTKTAVRE QVNNLDAATYFNLLAALMKDNPPALADGVAVAKMASLGIVSGRTFDPRGLTPSVREAVEQAPKQAISRIMGHMKTTGRHI NGWTFTTDGGDYGKDYLQRALVTAVGLGCNLPQDAVYPLTTVDAAGRRLAGTSKYVMRFPAGELPPVDGFWSLTMYDANF FFVDNPLNRYTVSPRNNLQTNPDGSVDLFIQTESPGPQRESNWLPAPTGPFILMLRTYWPKDALLNGSWAPPPVTRGAGA AL
Sequences:
>Translated_482_residues MGVTRRIFATGAATIPLIGSGFPRASAQNAAQDALLIGNNAVADPLELATDAYIYGYPLVTMEMTRRVLTNVVAPEGKSA PMGQFANLREYPDAKFRAVTAPNADTLYSSAFLDVGREPYILSIPNEDGRYFLMPMLSAWTNVFSVPGKRTTGTGPQTYF IAGPGWSGSVPSGAKLIQAPTSLVWIIGRTYCTGTPEDYKTVHALQDQYRLIPASAAATSYTPPAGQVDPGIDTKTAVRE QVNNLDAATYFNLLAALMKDNPPALADGVAVAKMASLGIVSGRTFDPRGLTPSVREAVEQAPKQAISRIMGHMKTTGRHI NGWTFTTDGGDYGKDYLQRALVTAVGLGCNLPQDAVYPLTTVDAAGRRLAGTSKYVMRFPAGELPPVDGFWSLTMYDANF FFVDNPLNRYTVSPRNNLQTNPDGSVDLFIQTESPGPQRESNWLPAPTGPFILMLRTYWPKDALLNGSWAPPPVTRGAGA AL >Mature_481_residues GVTRRIFATGAATIPLIGSGFPRASAQNAAQDALLIGNNAVADPLELATDAYIYGYPLVTMEMTRRVLTNVVAPEGKSAP MGQFANLREYPDAKFRAVTAPNADTLYSSAFLDVGREPYILSIPNEDGRYFLMPMLSAWTNVFSVPGKRTTGTGPQTYFI AGPGWSGSVPSGAKLIQAPTSLVWIIGRTYCTGTPEDYKTVHALQDQYRLIPASAAATSYTPPAGQVDPGIDTKTAVREQ VNNLDAATYFNLLAALMKDNPPALADGVAVAKMASLGIVSGRTFDPRGLTPSVREAVEQAPKQAISRIMGHMKTTGRHIN GWTFTTDGGDYGKDYLQRALVTAVGLGCNLPQDAVYPLTTVDAAGRRLAGTSKYVMRFPAGELPPVDGFWSLTMYDANFF FVDNPLNRYTVSPRNNLQTNPDGSVDLFIQTESPGPQRESNWLPAPTGPFILMLRTYWPKDALLNGSWAPPPVTRGAGAA L
Specific function: Unknown
COG id: COG5361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51825; Mature: 51694
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVTRRIFATGAATIPLIGSGFPRASAQNAAQDALLIGNNAVADPLELATDAYIYGYPLV CCCCCEEEECCCCEECEECCCCCCCCHHHHHCCEEEECCCCCCCHHHHHCCCEEEECCCH TMEMTRRVLTNVVAPEGKSAPMGQFANLREYPDAKFRAVTAPNADTLYSSAFLDVGREPY HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCE ILSIPNEDGRYFLMPMLSAWTNVFSVPGKRTTGTGPQTYFIAGPGWSGSVPSGAKLIQAP EEECCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHCCC TSLVWIIGRTYCTGTPEDYKTVHALQDQYRLIPASAAATSYTPPAGQVDPGIDTKTAVRE CEEEEEEECEEECCCCHHHHHHHHHHHHHEEEECHHCCCCCCCCCCCCCCCCCHHHHHHH QVNNLDAATYFNLLAALMKDNPPALADGVAVAKMASLGIVSGRTFDPRGLTPSVREAVEQ HHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCEECCCCCCCCCCCHHHHHHHHH APKQAISRIMGHMKTTGRHINGWTFTTDGGDYGKDYLQRALVTAVGLGCNLPQDAVYPLT HHHHHHHHHHHHHHHCCCEECCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEE TVDAAGRRLAGTSKYVMRFPAGELPPVDGFWSLTMYDANFFFVDNPLNRYTVSPRNNLQT EHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEECEEEEECCCCCCEEECCCCCCCC NPDGSVDLFIQTESPGPQRESNWLPAPTGPFILMLRTYWPKDALLNGSWAPPPVTRGAGA CCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCHHEECCCCCCCCCCCCCCC AL CC >Mature Secondary Structure GVTRRIFATGAATIPLIGSGFPRASAQNAAQDALLIGNNAVADPLELATDAYIYGYPLV CCCCEEEECCCCEECEECCCCCCCCHHHHHCCEEEECCCCCCCHHHHHCCCEEEECCCH TMEMTRRVLTNVVAPEGKSAPMGQFANLREYPDAKFRAVTAPNADTLYSSAFLDVGREPY HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCE ILSIPNEDGRYFLMPMLSAWTNVFSVPGKRTTGTGPQTYFIAGPGWSGSVPSGAKLIQAP EEECCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHCCC TSLVWIIGRTYCTGTPEDYKTVHALQDQYRLIPASAAATSYTPPAGQVDPGIDTKTAVRE CEEEEEEECEEECCCCHHHHHHHHHHHHHEEEECHHCCCCCCCCCCCCCCCCCHHHHHHH QVNNLDAATYFNLLAALMKDNPPALADGVAVAKMASLGIVSGRTFDPRGLTPSVREAVEQ HHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCEECCCCCCCCCCCHHHHHHHHH APKQAISRIMGHMKTTGRHINGWTFTTDGGDYGKDYLQRALVTAVGLGCNLPQDAVYPLT HHHHHHHHHHHHHHHCCCEECCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEE TVDAAGRRLAGTSKYVMRFPAGELPPVDGFWSLTMYDANFFFVDNPLNRYTVSPRNNLQT EHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEECEEEEECCCCCCEEECCCCCCCC NPDGSVDLFIQTESPGPQRESNWLPAPTGPFILMLRTYWPKDALLNGSWAPPPVTRGAGA CCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCHHEECCCCCCCCCCCCCCC AL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA