| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
Click here to switch to the map view.
The map label for this gene is 220915027
Identifier: 220915027
GI number: 220915027
Start: 400595
End: 401254
Strand: Reverse
Name: 220915027
Synonym: Mnod_8193
Alternate gene names: NA
Gene position: 401254-400595 (Counterclockwise)
Preceding gene: 220915029
Following gene: 220915026
Centisome position: 87.6
GC content: 66.67
Gene sequence:
>660_bases ATGAGCCCCTTGCCGGAGCGAACTGAGTCCCTGACAGCACCGCCGACGGACCCCAGCGGCCCCATCGCGGGGCGGCCCGG GCATTCATTGGCTCGGCGCGCCATCGATGAGGCCGAGCGTTATCTCTGGTTTGCCCTCTACCTCATCGTCATCTTGGGGA CGTTGATCCTCTTCAGCCTCAACATCTACGCCCGCATCGACCAGGATGTCCCGCGCTACCCGGGCTACCACTTCTACGCG CTCGGCCTGATCAACGCCCTCGTGTTTGCCAAGATCATGCTGATCGCCGAGGCGGCAGGCGTGGGCTCCAGGTTCATCGG GCGCCGCTTGGAGGCGGGACGGCTCGTCATGGTGATCCTCTATCGCGCGCTGGCATTCACCGTCGTCCTGGTCGCGGCCT ATGTACTGGAGGCGGTGCTGGAGGGGGCATGGCATGGGAAGGCGGTGGGGCAGGTCCTCCCGGAGATCGCTGGTGGCCCG CTCGGCCTGGTCTCGCTCGCCTGGATCATGCTGGTGGCCCTGGTTCCCTATTTCGCTTACCGCGAGCTCGGTCGCGTGCT CGGCCACGCGAGGTTGCAGGCGATCATGCTGAAGCCCGGCGGGACCTTCCGGGATGGCGCCGATCCGCAGACTGCGTCCC AGTCCCGGTTCGCGGCCTGA
Upstream 100 bases:
>100_bases CCGCGCCGCCGGCAGCCGGAGATCCAGAAGCCGAGAAACGAGATCCACGACAGCGCCCCCCCCGCTGCGCTTGCTCCCAT CCTAACTCAGGAGGTAGCCC
Downstream 100 bases:
>100_bases GGCTGATATGAACCTGCGAGGGTAGGGTGCTCAGATGGGCGATCATGGCACTGTTCCCCAAGTCGTACCCTGCCGCGCGC ATGCGTCACCTCGTGGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MSPLPERTESLTAPPTDPSGPIAGRPGHSLARRAIDEAERYLWFALYLIVILGTLILFSLNIYARIDQDVPRYPGYHFYA LGLINALVFAKIMLIAEAAGVGSRFIGRRLEAGRLVMVILYRALAFTVVLVAAYVLEAVLEGAWHGKAVGQVLPEIAGGP LGLVSLAWIMLVALVPYFAYRELGRVLGHARLQAIMLKPGGTFRDGADPQTASQSRFAA
Sequences:
>Translated_219_residues MSPLPERTESLTAPPTDPSGPIAGRPGHSLARRAIDEAERYLWFALYLIVILGTLILFSLNIYARIDQDVPRYPGYHFYA LGLINALVFAKIMLIAEAAGVGSRFIGRRLEAGRLVMVILYRALAFTVVLVAAYVLEAVLEGAWHGKAVGQVLPEIAGGP LGLVSLAWIMLVALVPYFAYRELGRVLGHARLQAIMLKPGGTFRDGADPQTASQSRFAA >Mature_218_residues SPLPERTESLTAPPTDPSGPIAGRPGHSLARRAIDEAERYLWFALYLIVILGTLILFSLNIYARIDQDVPRYPGYHFYAL GLINALVFAKIMLIAEAAGVGSRFIGRRLEAGRLVMVILYRALAFTVVLVAAYVLEAVLEGAWHGKAVGQVLPEIAGGPL GLVSLAWIMLVALVPYFAYRELGRVLGHARLQAIMLKPGGTFRDGADPQTASQSRFAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23771; Mature: 23640
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLPERTESLTAPPTDPSGPIAGRPGHSLARRAIDEAERYLWFALYLIVILGTLILFSL CCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIYARIDQDVPRYPGYHFYALGLINALVFAKIMLIAEAAGVGSRFIGRRLEAGRLVMVIL HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHH YRALAFTVVLVAAYVLEAVLEGAWHGKAVGQVLPEIAGGPLGLVSLAWIMLVALVPYFAY HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RELGRVLGHARLQAIMLKPGGTFRDGADPQTASQSRFAA HHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SPLPERTESLTAPPTDPSGPIAGRPGHSLARRAIDEAERYLWFALYLIVILGTLILFSL CCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIYARIDQDVPRYPGYHFYALGLINALVFAKIMLIAEAAGVGSRFIGRRLEAGRLVMVIL HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHH YRALAFTVVLVAAYVLEAVLEGAWHGKAVGQVLPEIAGGPLGLVSLAWIMLVALVPYFAY HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RELGRVLGHARLQAIMLKPGGTFRDGADPQTASQSRFAA HHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA