| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
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The map label for this gene is 220915007
Identifier: 220915007
GI number: 220915007
Start: 383975
End: 384886
Strand: Reverse
Name: 220915007
Synonym: Mnod_8171
Alternate gene names: NA
Gene position: 384886-383975 (Counterclockwise)
Preceding gene: 220915008
Following gene: 220915004
Centisome position: 84.02
GC content: 49.78
Gene sequence:
>912_bases ATGAGCTGGTTTTTCATCGCTCTGTGGGCGCCATTCCTTCTTGCCTGCGCCAATCATAATGACAAGTTGTTGCTCTCGAA ATACTTCAAGGACAAAACTATTGGACCTATTGTCATTTTCTCTTCGCTATTCAGTGGCGTCGCGATCCCGATCGCATTAC TCATTCAGCCTAACGTATACGAGGTCAGCCTTGTTCAAGGATCTGCGCTTGTCACGACCGGGATGTTGAGCGTCGTCGCC GGCGTTTTTTATCTCTACGCACTCGACCTCGACGAGGCATCTTTCGTCACGCCGTTTTATCAGACAGTGCCAATATTTGC ATACTTCCTCGGATACTTCATCCTGGGTGAAACTATCACGCTTTCTCAAGGCTTGGGTTCGTCCGTTATTATTGCCGGTG CGATTGCATTGTCGTTGGAGTTTGGCCAGCGAGGGATACGGTTCAAGCGAAACGTCGTGGCATTGATGCTTGTGGCTTCC TTCTTGAGCGCGATAAATGGCGTCGTTTTCAAGCTGATCGCTGTGAGCAAGGGTTTTTGGGTATCGCTTTTTTGGGGTTT CATCGGCCAAGTGATAGCCGGTTTTATTTTTCTAGTCTGTGTTCCAAGTTACCGGAGAGATTTTATCACTTTGCTCAAAC AACAAAAAGTCCCCGCTGCTGGCCTTATCGCGTTGAGCAGGACATTGTTCAGCGTCAGTGAAGCCGTCACGCTTTATGCA ACACTCCTGGCGCCCGTCGCGTTGGTTCTTGTCGTGAATTCGTTCCAGCCCCTTTTTGTCTTTATGCTCGGAATCGTGCT TACGCTGCTTCTTCCTCGCGTGGCTAAGGAATCGCTGGACCGCAGGAAGATGCTGCAAAAGGGAGTGGGAATTGGCCTCA TGCTCGCCGGTGGTTACTTGATCAGCAGATAA
Upstream 100 bases:
>100_bases GGCAGCGGCTCGCCGCGAACGCTCGCGCGGCAGCGACTCAGCTTCCCACTTGGCAGGATTCCGCTCGACTGTTTGCCCGC GCCGTCGAGACGGTCCGATT
Downstream 100 bases:
>100_bases GCTCGAGTTTGGCCCTTTTTGTTTAGGCGTTGATCCAGAAGAGCGGCTCGGAGGCGATGTAGTCGAGGGCTGCGTCGAGG GGCATGGTGGCGATGCCGAA
Product: protein of unknown function DUF6 transmembrane
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MSWFFIALWAPFLLACANHNDKLLLSKYFKDKTIGPIVIFSSLFSGVAIPIALLIQPNVYEVSLVQGSALVTTGMLSVVA GVFYLYALDLDEASFVTPFYQTVPIFAYFLGYFILGETITLSQGLGSSVIIAGAIALSLEFGQRGIRFKRNVVALMLVAS FLSAINGVVFKLIAVSKGFWVSLFWGFIGQVIAGFIFLVCVPSYRRDFITLLKQQKVPAAGLIALSRTLFSVSEAVTLYA TLLAPVALVLVVNSFQPLFVFMLGIVLTLLLPRVAKESLDRRKMLQKGVGIGLMLAGGYLISR
Sequences:
>Translated_303_residues MSWFFIALWAPFLLACANHNDKLLLSKYFKDKTIGPIVIFSSLFSGVAIPIALLIQPNVYEVSLVQGSALVTTGMLSVVA GVFYLYALDLDEASFVTPFYQTVPIFAYFLGYFILGETITLSQGLGSSVIIAGAIALSLEFGQRGIRFKRNVVALMLVAS FLSAINGVVFKLIAVSKGFWVSLFWGFIGQVIAGFIFLVCVPSYRRDFITLLKQQKVPAAGLIALSRTLFSVSEAVTLYA TLLAPVALVLVVNSFQPLFVFMLGIVLTLLLPRVAKESLDRRKMLQKGVGIGLMLAGGYLISR >Mature_302_residues SWFFIALWAPFLLACANHNDKLLLSKYFKDKTIGPIVIFSSLFSGVAIPIALLIQPNVYEVSLVQGSALVTTGMLSVVAG VFYLYALDLDEASFVTPFYQTVPIFAYFLGYFILGETITLSQGLGSSVIIAGAIALSLEFGQRGIRFKRNVVALMLVASF LSAINGVVFKLIAVSKGFWVSLFWGFIGQVIAGFIFLVCVPSYRRDFITLLKQQKVPAAGLIALSRTLFSVSEAVTLYAT LLAPVALVLVVNSFQPLFVFMLGIVLTLLLPRVAKESLDRRKMLQKGVGIGLMLAGGYLISR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33033; Mature: 32902
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWFFIALWAPFLLACANHNDKLLLSKYFKDKTIGPIVIFSSLFSGVAIPIALLIQPNVY CCEEHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEECCCCE EVSLVQGSALVTTGMLSVVAGVFYLYALDLDEASFVTPFYQTVPIFAYFLGYFILGETIT EEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHE LSQGLGSSVIIAGAIALSLEFGQRGIRFKRNVVALMLVASFLSAINGVVFKLIAVSKGFW ECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH VSLFWGFIGQVIAGFIFLVCVPSYRRDFITLLKQQKVPAAGLIALSRTLFSVSEAVTLYA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH TLLAPVALVLVVNSFQPLFVFMLGIVLTLLLPRVAKESLDRRKMLQKGVGIGLMLAGGYL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHH ISR HCC >Mature Secondary Structure SWFFIALWAPFLLACANHNDKLLLSKYFKDKTIGPIVIFSSLFSGVAIPIALLIQPNVY CEEHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEECCCCE EVSLVQGSALVTTGMLSVVAGVFYLYALDLDEASFVTPFYQTVPIFAYFLGYFILGETIT EEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHE LSQGLGSSVIIAGAIALSLEFGQRGIRFKRNVVALMLVASFLSAINGVVFKLIAVSKGFW ECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH VSLFWGFIGQVIAGFIFLVCVPSYRRDFITLLKQQKVPAAGLIALSRTLFSVSEAVTLYA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH TLLAPVALVLVVNSFQPLFVFMLGIVLTLLLPRVAKESLDRRKMLQKGVGIGLMLAGGYL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHH ISR HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA