| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
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The map label for this gene is 220914894
Identifier: 220914894
GI number: 220914894
Start: 267121
End: 268188
Strand: Reverse
Name: 220914894
Synonym: Mnod_8042
Alternate gene names: NA
Gene position: 268188-267121 (Counterclockwise)
Preceding gene: 220914897
Following gene: 220914893
Centisome position: 58.55
GC content: 62.55
Gene sequence:
>1068_bases ATGCCTGCAGACCACAATTTTCCAACCGACCGCACGAAGCTTGCGCGCCTGCTATTCCCGGCTGGCGTTCCGATGCTCTG GTCGCCGACTCTGGTGTTCTATGATGAGGCAGGCCGCATCGACCGCGACCGCCAGCTCGCGCATCTGGCCTTCATGGCAC CTCACGTGAAGGGCTATCTCGTCCCTGGCTCGACCGGTGATGCATGGGAAATGGATGATGCCGAAGCTCTCACGGCGCTG GAGGTGGCAATCCCCTTTGCTGTGCAACATGGCCTGGATCTTCTCGTCGGTGTCCTTCGCCCGACGACCGATGCCATGCA TGCGCTGATCGACAAAGTCCTGCATTACCTTTGCCGACGCGCTGGAACACATTCGGTCGCCGATGCCTTCGCGGCGAGTC ACGTCCGCGGGCTCACGATCGCAGCACCGACCACCGACACGCCTCTCTCGCAAGACGCCATCGGCGCGGCGCTTGCGCCT GTGTTTGAGCTTGGGCTGCCAATCGCTCTTTACCAGCTGCCGCAGGTGACTGGGAACACGATGACACCGGAACTGGTTGC TGGGCTGGCGGAGCGCTTTCCGAATCTGCTCCTGTTCAAGGACAGCAGCGGCAGGGATGAAGTGGCGCTGTCAGGCCGAA TGCCCGCAGGAGTGACGCTCCTGCGCGGCGCCGAGGGCGACTATGCTCAATGGAGCAAAGCACATGGTGGCGTGTATGAC GGCTTCCTGCTCAGCAGTGCCAACGCCTTCCCGGCCCAGCTCGCGACAGTGCTCGAACATCTCCAGCACGGGCGCATTGC AGAAGCTGAACGGTGCTCGGCGGCCATTTCGGCAGCGGTTGCCGACGCTTTTGCGGCCGTCGTCGAGGTGCGGCAGGGCA ATGCATTCACGAACGCGAACAAGGCTCTTGCTCATATCATGGCCTATGGCCGTGACGCGCTCGAAGCACCGCCGCCGAGG CTCTATGCCGGCGGTCATCTTCCGCACTCGACCCTGAAAACGGTTATGGAGTCCCTGACCCGCAATGGGCTCCTACCCGG ACGCGGTTACCTTGAGAACCGTGGGTGA
Upstream 100 bases:
>100_bases GACGCGATCCTGCGCACGACGGAAGCCTGAGATTGGCGACAGACCCCTCGTCCTCTACACATCGAGTAACACTGGCGGGA TCAGCAAGGATACGGCAACC
Downstream 100 bases:
>100_bases GGCTGAACACCGGTCTCAATCGCAACAAGGTCTATTCACGCAAGCATGGAACGAGACCGACAGAGGACAAGAGGTTGAGG ATGTTGCTTCTGAGAAGCAA
Product: dihydrodipicolinate synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MPADHNFPTDRTKLARLLFPAGVPMLWSPTLVFYDEAGRIDRDRQLAHLAFMAPHVKGYLVPGSTGDAWEMDDAEALTAL EVAIPFAVQHGLDLLVGVLRPTTDAMHALIDKVLHYLCRRAGTHSVADAFAASHVRGLTIAAPTTDTPLSQDAIGAALAP VFELGLPIALYQLPQVTGNTMTPELVAGLAERFPNLLLFKDSSGRDEVALSGRMPAGVTLLRGAEGDYAQWSKAHGGVYD GFLLSSANAFPAQLATVLEHLQHGRIAEAERCSAAISAAVADAFAAVVEVRQGNAFTNANKALAHIMAYGRDALEAPPPR LYAGGHLPHSTLKTVMESLTRNGLLPGRGYLENRG
Sequences:
>Translated_355_residues MPADHNFPTDRTKLARLLFPAGVPMLWSPTLVFYDEAGRIDRDRQLAHLAFMAPHVKGYLVPGSTGDAWEMDDAEALTAL EVAIPFAVQHGLDLLVGVLRPTTDAMHALIDKVLHYLCRRAGTHSVADAFAASHVRGLTIAAPTTDTPLSQDAIGAALAP VFELGLPIALYQLPQVTGNTMTPELVAGLAERFPNLLLFKDSSGRDEVALSGRMPAGVTLLRGAEGDYAQWSKAHGGVYD GFLLSSANAFPAQLATVLEHLQHGRIAEAERCSAAISAAVADAFAAVVEVRQGNAFTNANKALAHIMAYGRDALEAPPPR LYAGGHLPHSTLKTVMESLTRNGLLPGRGYLENRG >Mature_354_residues PADHNFPTDRTKLARLLFPAGVPMLWSPTLVFYDEAGRIDRDRQLAHLAFMAPHVKGYLVPGSTGDAWEMDDAEALTALE VAIPFAVQHGLDLLVGVLRPTTDAMHALIDKVLHYLCRRAGTHSVADAFAASHVRGLTIAAPTTDTPLSQDAIGAALAPV FELGLPIALYQLPQVTGNTMTPELVAGLAERFPNLLLFKDSSGRDEVALSGRMPAGVTLLRGAEGDYAQWSKAHGGVYDG FLLSSANAFPAQLATVLEHLQHGRIAEAERCSAAISAAVADAFAAVVEVRQGNAFTNANKALAHIMAYGRDALEAPPPRL YAGGHLPHSTLKTVMESLTRNGLLPGRGYLENRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37850; Mature: 37718
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPADHNFPTDRTKLARLLFPAGVPMLWSPTLVFYDEAGRIDRDRQLAHLAFMAPHVKGYL CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEE VPGSTGDAWEMDDAEALTALEVAIPFAVQHGLDLLVGVLRPTTDAMHALIDKVLHYLCRR EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AGTHSVADAFAASHVRGLTIAAPTTDTPLSQDAIGAALAPVFELGLPIALYQLPQVTGNT CCCHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC MTPELVAGLAERFPNLLLFKDSSGRDEVALSGRMPAGVTLLRGAEGDYAQWSKAHGGVYD CCHHHHHHHHHHCCCEEEEECCCCCCCEEECCCCCCCEEEEECCCCCHHHHHHHCCCCCC GFLLSSANAFPAQLATVLEHLQHGRIAEAERCSAAISAAVADAFAAVVEVRQGNAFTNAN HHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH KALAHIMAYGRDALEAPPPRLYAGGHLPHSTLKTVMESLTRNGLLPGRGYLENRG HHHHHHHHHCCHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure PADHNFPTDRTKLARLLFPAGVPMLWSPTLVFYDEAGRIDRDRQLAHLAFMAPHVKGYL CCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEE VPGSTGDAWEMDDAEALTALEVAIPFAVQHGLDLLVGVLRPTTDAMHALIDKVLHYLCRR EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AGTHSVADAFAASHVRGLTIAAPTTDTPLSQDAIGAALAPVFELGLPIALYQLPQVTGNT CCCHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC MTPELVAGLAERFPNLLLFKDSSGRDEVALSGRMPAGVTLLRGAEGDYAQWSKAHGGVYD CCHHHHHHHHHHCCCEEEEECCCCCCCEEECCCCCCCEEEEECCCCCHHHHHHHCCCCCC GFLLSSANAFPAQLATVLEHLQHGRIAEAERCSAAISAAVADAFAAVVEVRQGNAFTNAN HHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH KALAHIMAYGRDALEAPPPRLYAGGHLPHSTLKTVMESLTRNGLLPGRGYLENRG HHHHHHHHHCCHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA