| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
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The map label for this gene is 220914888
Identifier: 220914888
GI number: 220914888
Start: 260411
End: 261262
Strand: Reverse
Name: 220914888
Synonym: Mnod_8035
Alternate gene names: NA
Gene position: 261262-260411 (Counterclockwise)
Preceding gene: 220914889
Following gene: 220914887
Centisome position: 57.04
GC content: 75.35
Gene sequence:
>852_bases GTGAGCGCACCCGACATTCTCTACCGCCTACGGGACCCGGCAGCCGGTCCCGGACCCGGAGCGCACCGCGCCCGCGACAC CGGCGGACCCGGGATTTTTCGCGATCAGGTGCCGTTCTGGCGCCATCCCGATGCCCGGCGGATCGACCTGCGCGCCACCT TGCGCGACCCGTTCGGCACCACGATGGTGCGGCGGTTCGAGCAGCCCCGCGCGGTGGAGGTCTGGGTGCTGCTCGACCTC TCGGCCTCGATGCGCTTTTGCGGCCGGTCCGAGCCCTGGCGCCTCGCGTGCGATCTCTGCGTCGCGCTGGCGCATTCGGC GACGCGGATCGGCGACGCCTTCGGGCTGATCGGCTGCGATGCCGGCCCGCGCGAGGACGTGACCCTGCCGGCGACCCGGC GGCGCTGCGCCGCCGCCCGCGTCACCGCGATGCTCGACGCCGTGGTCCCGCACGGCCGCGGAGCCGCCGGGCTGGTCGCG GCCGCCGGGCGCCTGGCGGGACGGCGCCGGCTGGTGCTGGTGGTCTCGGACTTCCGGATGCCGGAGGCGCAGGTGGCGGC GCTGTTCGACCGGCTCGCGCCGCACGACCTCGTCCCGGTCCTGGTGGATGACGATGCGCTGGGGGCGGATCTCCCGGATT TCGGTCTCCTCGCCCTCGACGACCTCGAAGGCGGCGGAAGGCGGCTGGTGCTGATGCGCCCGGCGCTGAAGGCCCGCTGG CTCGCCCGCGAGGCGGCATTCCGCACGGCGCTGCATCGGCTGGCCCTCGCCCGCGGGCGCCCGCCCTACCGGCTCGCCGG CCGGCTCGATGCGGATGAGTTGTCCCGGCACCTCCTGGGGACGGCCGCATGA
Upstream 100 bases:
>100_bases CCATGGCGCACCGGGTCTTCCTGGAGCCGGTCTACGAGATGCGCCGCGAGCGCCTCGTGCCCGAGCTCTGCCGGGCCGTC CTCGCCGCGGTGCCGGTGCC
Downstream 100 bases:
>100_bases GGGGCCGTGCCATCCCCGCGCTCCTCGTTCTGCTCGCCATCCTCACGGCGGCGCCGGCCGCCGCGCAGGTCGGCGACGTC GTGGTGCGCAGCCCGCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MSAPDILYRLRDPAAGPGPGAHRARDTGGPGIFRDQVPFWRHPDARRIDLRATLRDPFGTTMVRRFEQPRAVEVWVLLDL SASMRFCGRSEPWRLACDLCVALAHSATRIGDAFGLIGCDAGPREDVTLPATRRRCAAARVTAMLDAVVPHGRGAAGLVA AAGRLAGRRRLVLVVSDFRMPEAQVAALFDRLAPHDLVPVLVDDDALGADLPDFGLLALDDLEGGGRRLVLMRPALKARW LAREAAFRTALHRLALARGRPPYRLAGRLDADELSRHLLGTAA
Sequences:
>Translated_283_residues MSAPDILYRLRDPAAGPGPGAHRARDTGGPGIFRDQVPFWRHPDARRIDLRATLRDPFGTTMVRRFEQPRAVEVWVLLDL SASMRFCGRSEPWRLACDLCVALAHSATRIGDAFGLIGCDAGPREDVTLPATRRRCAAARVTAMLDAVVPHGRGAAGLVA AAGRLAGRRRLVLVVSDFRMPEAQVAALFDRLAPHDLVPVLVDDDALGADLPDFGLLALDDLEGGGRRLVLMRPALKARW LAREAAFRTALHRLALARGRPPYRLAGRLDADELSRHLLGTAA >Mature_282_residues SAPDILYRLRDPAAGPGPGAHRARDTGGPGIFRDQVPFWRHPDARRIDLRATLRDPFGTTMVRRFEQPRAVEVWVLLDLS ASMRFCGRSEPWRLACDLCVALAHSATRIGDAFGLIGCDAGPREDVTLPATRRRCAAARVTAMLDAVVPHGRGAAGLVAA AGRLAGRRRLVLVVSDFRMPEAQVAALFDRLAPHDLVPVLVDDDALGADLPDFGLLALDDLEGGGRRLVLMRPALKARWL AREAAFRTALHRLALARGRPPYRLAGRLDADELSRHLLGTAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30772; Mature: 30641
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPDILYRLRDPAAGPGPGAHRARDTGGPGIFRDQVPFWRHPDARRIDLRATLRDPFGT CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHH TMVRRFEQPRAVEVWVLLDLSASMRFCGRSEPWRLACDLCVALAHSATRIGDAFGLIGCD HHHHHHCCCCEEEEEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECC AGPREDVTLPATRRRCAAARVTAMLDAVVPHGRGAAGLVAAAGRLAGRRRLVLVVSDFRM CCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCC PEAQVAALFDRLAPHDLVPVLVDDDALGADLPDFGLLALDDLEGGGRRLVLMRPALKARW CHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCHHHHH LAREAAFRTALHRLALARGRPPYRLAGRLDADELSRHLLGTAA HHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCC >Mature Secondary Structure SAPDILYRLRDPAAGPGPGAHRARDTGGPGIFRDQVPFWRHPDARRIDLRATLRDPFGT CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHH TMVRRFEQPRAVEVWVLLDLSASMRFCGRSEPWRLACDLCVALAHSATRIGDAFGLIGCD HHHHHHCCCCEEEEEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECC AGPREDVTLPATRRRCAAARVTAMLDAVVPHGRGAAGLVAAAGRLAGRRRLVLVVSDFRM CCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCC PEAQVAALFDRLAPHDLVPVLVDDDALGADLPDFGLLALDDLEGGGRRLVLMRPALKARW CHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCHHHHH LAREAAFRTALHRLALARGRPPYRLAGRLDADELSRHLLGTAA HHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA